iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109275

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377565

Gene Name

SELMODRAFT_229944

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_229944	EFJ38024	EFJ38024

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-28	97.3	238	267
E3 adaptor/Cullin RING/APC_C/CDC20	8.00e-130	433.2	102	408

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+ +v++l++ ++   l+sG++D+ +++WD
   Q: 238  HQQEVCGLKWsPSgQQLASGGNDNLLHIWD 267
           99*********66699************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvg 100
           pe+ ldape+ dd+ylnLldW+s+nv+avaLg++vylw+a+tg++++l++  ee+  vtsv+w ++g++++vG +++ v+++D  + ++vr+l+ hsarvg
   Q: 102  PERTLDAPEILDDYYLNLLDWGSNNVVAVALGHTVYLWNASTGNIEELMQAnEEDGPVTSVAWAPDGKHISVGLSNADVQLWDSLSLRQVRSLKAHSARVG 202
           6799**********************************************9566668******************************************** PP
   S: 101  aLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......PlkkfkehkaavkaiawsPwqkslL 195
           +L+Wn  +ls+G+rd+ i  +dvr++e+ + ++ ah+qevCGlkw+ ++++LasGGnDn +++wda+          l++ +eh+aavka+aw+P+q++lL
   Q: 203  SLAWNGPILSTGGRDNVIFNHDVRIREHVTGKMVAHQQEVCGLKWSPSGQQLASGGNDNLLHIWDAAAAVsggtssYLHRLDEHQAAVKALAWCPFQSNLL 303
           *****************************************************************98765566666899999******************* PP
   S: 196  asGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwkl 296
           asGGGtaDrcikfwnt tga+++++dtgsqvc l wsk+++el+s+hGf++n+++lwkyps+ k+ael+gh++Rvl+la spdg ++++aagDetlrfw++
   Q: 304  ASGGGTADRCIKFWNTHTGACIQSVDTGSQVCALQWSKHERELLSSHGFSQNQLILWKYPSMVKMAELTGHTSRVLHLAQSPDGYTVASAAGDETLRFWQV 404
           ***************************************************************************************************** PP
   S: 297  fdkk 300
           f + 
   Q: 405  FGNP 408
           *765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MNFDVANMLV LGKENSHSQQ QQQQQQHLRY DCCQEEYKKQ LAENLLKDAN ILHKESRILA 60
FKNRPPPPPE GFDKESSLLY SENTAPGASR PRKMFRHIPQ APERTLDAPE ILDDYYLNLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTTCG ATGTCGCAAA TATGCTCGTG CTCGGCAAGG AGAACTCGCA TTCTCAGCAG 60
CAGCAGCAAC AGCAGCAGCA TCTGAGGTAC GATTGCTGCC AGGAAGAGTA CAAGAAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

smo:SELMODRAFT_229944

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Tsy-118931	Tarsius syrichta	39.94	2.00e-61	229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence