iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016899

Ensembl Protein ID

Bra026076.1-P

UniProt Accession

M4EBB7; M4EBB7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026076	Bra026076.1	Bra026076.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.00e-24	84.7	147	187
ULD/UDP/UBQ/UBQ_PIM	2.90e-21	76.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e+ ++q++eMG   +d+e++l+aLraa++nle+Av+yL++g
   Q: 147  EQRVQQIMEMGggsWDEETVLRALRAAYYNLERAVDYLYSG 187
           899***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktlkg+ fe++v + dt+ ++K+ i+++++   +p+ qq LI++Gk+LkD+ttL e+++ ++ +++++++ksk
   Q: 1    MKLTVKTLKGSRFEIRVLPTDTIMSVKKSIEDSQSkesYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSK 78
           99*******************************9999**************************************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKLTVKTLKG SRFEIRVLPT DTIMSVKKSI EDSQSKESYP CGQQLLIHNG KVLKDETTLV 60
ENKVTEEGFL VVMLSKSKTA SSAGPSSTLP TSTTTSTPSS TTPAAPSTTQ SIAVPAANST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCA CCGTTAAGAC GCTCAAGGGT AGCCGTTTTG AAATTAGGGT TCTGCCCACC 60
GACACGGTCA GTCCCCTTGT CTTTAAAGTA CCCATTTATC GTAAAATACG AATTTGATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011107	Astyanax mexicanus	39.22	6.00e-24	104.00
IUUC-Bol-015393	Brassica oleracea	88.62	5.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence