iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024034

Ensembl Protein ID

ENSCSAP00000014373.1

UniProt Accession

A0A0D9S0I4; A0A0D9S0I4_CHLSB

Protein Name

Uncharacterized protein

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000018366.1	ENSCSAT00000016464.1	ENSCSAP00000014373.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.30e-09	36.0	467	505
E3 activity/RING/U-box	2.70e-11	43.3	464	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 467  CALCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 505
           ****999977.***************999......9*********7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 464  DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLsqclASRKYSKNVIMEELIAKFL 531
           678*********************************9.****876633336777788888888887776 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MESLRTEQML SLPAEVSSNN LEPAERGASA AQVDMGPHRE AAAESPAPLP TREPQQEQSP 60
GTSTPESKVL LTQADALASR GRIREALEVY RQLSERQQLV AEQLEQLVRC LAEKVPQGEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTCCT TACGGACCGA ACAGATGCTG AGCTTGCCCG CCGAGGTCAG CAGCAACAAC 60
TTGGAGCCGG CGGAGCGAGG GGCATCAGCG GCCCAAGTAG ACATGGGCCC CCACCGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	77.47	0.00e+00	1006.00
IUUC-Apl-003916	Anas platyrhynchos	61.15	0.00e+00	630.00
IUUC-Ame-010750	Astyanax mexicanus	45.20	2.00e-164	572.00
IUUC-Bta-012872	Bos taurus	87.37	0.00e+00	1144.00
IUUC-Cel-018356	Caenorhabditis elegans	32.53	8.00e-10	56.20
IUUC-Cja-018747	Callithrix jacchus	85.96	0.00e+00	1142.00
IUUC-Cfa-020101	Canis familiaris	85.01	0.00e+00	1110.00
IUUC-Cpo-022041	Cavia porcellus	77.08	0.00e+00	1011.00
IUUC-Cin-025668	Ciona intestinalis	34.22	4.00e-98	352.00
IUUC-Csv-026364	Ciona savignyi	45.87	2.00e-79	289.00
IUUC-Dno-029518	Dasypus novemcinctus	77.85	0.00e+00	1039.00
IUUC-Dor-031132	Dipodomys ordii	70.86	0.00e+00	1008.00
IUUC-Dse-031331	Dothistroma septosporum	31.69	2.00e-39	157.00
IUUC-Eca-033382	Equus caballus	88.41	0.00e+00	1223.00
IUUC-Fca-035777	Felis catus	78.17	0.00e+00	725.00
IUUC-Fal-036730	Ficedula albicollis	61.58	0.00e+00	649.00
IUUC-Gmo-039110	Gadus morhua	47.97	3.00e-176	611.00
IUUC-Gga-041187	Gallus gallus	58.10	0.00e+00	825.00
IUUC-Gac-042201	Gasterosteus aculeatus	50.42	0.00e+00	662.00
IUUC-Ggo-045111	Gorilla gorilla	98.16	0.00e+00	1363.00
IUUC-Hsa-045695	Homo sapiens	98.02	0.00e+00	1359.00
IUUC-Lch-050429	Latimeria chalumnae	51.65	0.00e+00	729.00
IUUC-Loc-051823	Lepisosteus oculatus	52.47	0.00e+00	663.00
IUUC-Lma-053145	Leptosphaeria maculans	31.55	4.00e-41	162.00
IUUC-Laf-053434	Loxodonta africana	87.48	0.00e+00	901.00
IUUC-Mcc-055249	Macaca mulatta	89.66	0.00e+00	868.00
IUUC-Mga-060131	Meleagris gallopavo	62.30	0.00e+00	627.00
IUUC-Mvi-060228	Microbotryum violaceum	34.38	3.00e-47	184.00
IUUC-Mmr-060749	Microcebus murinus	88.60	0.00e+00	1244.00
IUUC-Mdo-062261	Monodelphis domestica	55.42	0.00e+00	749.00
IUUC-Mmu-063219	Mus musculus	80.10	0.00e+00	1076.00
IUUC-Mpu-066222	Mustela putorius furo	76.31	0.00e+00	992.00
IUUC-Mlu-067769	Myotis lucifugus	83.68	0.00e+00	1127.00
IUUC-Nle-069738	Nomascus leucogenys	98.25	0.00e+00	1068.00
IUUC-Ont-072029	Oreochromis niloticus	56.16	8.00e-172	597.00
IUUC-Oan-073179	Ornithorhynchus anatinus	79.42	1.00e-167	582.00
IUUC-Ocu-074884	Oryctolagus cuniculus	84.27	0.00e+00	1101.00
IUUC-Ogl-077658	Oryza glaberrima	34.04	4.00e-12	65.50
IUUC-Ome-081482	Oryza meridionalis	34.04	7.00e-12	64.70
IUUC-Osa-085978	Oryza sativa	34.04	4.00e-12	65.50
IUUC-Ola-086534	Oryzias latipes	40.00	4.00e-158	551.00
IUUC-Oga-089109	Otolemur garnettii	85.08	0.00e+00	1138.00
IUUC-Oar-089903	Ovis aries	87.89	0.00e+00	1154.00
IUUC-Ptr-091238	Pan troglodytes	97.49	0.00e+00	1345.00
IUUC-Pan-092379	Papio anubis	92.85	0.00e+00	1370.00
IUUC-Psi-093418	Pelodiscus sinensis	61.26	0.00e+00	716.00
IUUC-Pma-094231	Petromyzon marinus	63.60	4.00e-110	390.00
IUUC-Pno-094889	Phaeosphaeria nodorum	38.68	2.00e-41	162.00
IUUC-Pfo-097284	Poecilia formosa	47.81	3.00e-177	615.00
IUUC-Pab-098343	Pongo abelii	91.37	0.00e+00	1327.00
IUUC-Pca-100905	Procavia capensis	81.00	0.00e+00	996.00
IUUC-Pva-102242	Pteropus vampyrus	81.47	0.00e+00	1097.00
IUUC-Ptt-103898	Puccinia triticina	26.87	6.00e-29	122.00
IUUC-Rno-105899	Rattus norvegicus	76.23	0.00e+00	1092.00
IUUC-Sha-107565	Sarcophilus harrisii	51.60	0.00e+00	701.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	36.45	7.00e-31	128.00
IUUC-Sar-112999	Sorex araneus	63.44	0.00e+00	674.00
IUUC-Sre-114977	Sporisorium reilianum	33.85	3.00e-35	144.00
IUUC-Ssc-115705	Sus scrofa	88.04	0.00e+00	1191.00
IUUC-Tgu-116978	Taeniopygia guttata	65.40	0.00e+00	800.00
IUUC-Tsy-118988	Tarsius syrichta	93.60	0.00e+00	952.00
IUUC-Tni-119913	Tetraodon nigroviridis	46.39	4.00e-159	554.00
IUUC-Tbe-127563	Tupaia belangeri	71.18	2.00e-145	508.00
IUUC-Ttr-128875	Tursiops truncatus	86.96	0.00e+00	1086.00
IUUC-Vpa-130779	Vicugna pacos	96.17	3.00e-160	558.00
IUUC-Xtr-132508	Xenopus tropicalis	53.00	0.00e+00	732.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence