iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131034

Ensembl Protein ID

VIT_06s0004g03460.t01

UniProt Accession

D7SKS3; D7SKS3_VITVI

Genbank Protein ID

CBI16251.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594951

Gene Name

VIT_06s0004g03460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0004g03460	VIT_06s0004g03460.t01	VIT_06s0004g03460.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-24	84.7	50	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ v+ ++f s+ + lvsGsdD ++  WD+
   Q: 50   GHKECVNTVEFnSTgDVLVSGSDDRQVIFWDW 81
           8**********97779***************7 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEYRCKGFGD EFTEVFKREM GFSRPRCFPR RISASEGLVK RITLHGKLNG HKECVNTVEF 60
NSTGDVLVSG SDDRQVIFWD WAAKSKTFSY PSGHLDNIFQ ARIMPFTDDR KIVTSSCDGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACACGTATG CATCTATTCA CCCTTGCTTA AAATTCGATT CTCATTCTCA CTGTATATCG 60
CACTTGGTAC ATGCCATGAT CTTCAAGCCT TCCTTCGATT CTGAGCGCAA CTCCAACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

vvi:100253665

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	50.66	2.00e-136	478.00
IUUC-Atr-002578	Amborella trichopoda	67.17	0.00e+00	644.00
IUUC-Apl-003181	Anas platyrhynchos	32.97	5.00e-34	139.00
IUUC-Aly-005818	Arabidopsis lyrata	61.72	5.00e-179	619.00
IUUC-Ath-006585	Arabidopsis thaliana	57.62	1.00e-172	598.00
IUUC-Bol-016291	Brassica oleracea	59.71	1.00e-174	604.00
IUUC-Bra-017588	Brassica rapa	58.04	5.00e-172	596.00
IUUC-Csv-026331	Ciona savignyi	38.68	3.00e-65	241.00
IUUC-Dme-032115	Drosophila melanogaster	38.12	2.00e-63	236.00
IUUC-Eeu-034732	Erinaceus europaeus	29.35	1.00e-33	137.00
IUUC-Fal-037527	Ficedula albicollis	32.45	6.00e-36	145.00
IUUC-Gma-044124	Glycine max	66.95	0.00e+00	653.00
IUUC-Hvu-047687	Hordeum vulgare	55.35	3.00e-144	504.00
IUUC-Lch-050050	Latimeria chalumnae	34.90	8.00e-52	197.00
IUUC-Lpe-051191	Leersia perrieri	54.04	2.00e-142	498.00
IUUC-Loc-052880	Lepisosteus oculatus	33.70	2.00e-35	143.00
IUUC-Mtr-057813	Medicago truncatula	63.73	9.00e-180	622.00
IUUC-Mac-064558	Musa acuminata	60.93	2.00e-174	604.00
IUUC-Opr-070489	Ochotona princeps	28.89	9.00e-35	140.00
IUUC-Oan-072748	Ornithorhynchus anatinus	24.09	2.00e-17	82.00
IUUC-Oba-075746	Oryza barthii	54.45	1.00e-150	525.00
IUUC-Obr-076629	Oryza brachyantha	52.54	4.00e-148	517.00
IUUC-Ogl-077243	Oryza glaberrima	55.78	3.00e-153	534.00
IUUC-Ogu-078029	Oryza glumaepatula	55.33	4.00e-152	530.00
IUUC-Olo-080308	Oryza longistaminata	52.18	1.00e-140	492.00
IUUC-Ome-081126	Oryza meridionalis	54.67	6.00e-141	493.00
IUUC-Oni-083114	Oryza nivara	55.56	5.00e-153	533.00
IUUC-Opu-083288	Oryza punctata	53.72	6.00e-144	503.00
IUUC-Oru-084724	Oryza rufipogon	55.78	3.00e-153	534.00
IUUC-Osa-085895	Oryza sativa	55.78	3.00e-153	534.00
IUUC-Ola-086755	Oryzias latipes	34.17	3.00e-36	146.00
IUUC-Olu-087847	Ostreococcus lucimarinus	30.70	6.00e-38	150.00
IUUC-Ppa-095764	Physcomitrella patens	50.79	1.00e-127	448.00
IUUC-Smo-108963	Selaginella moellendorffii	48.55	1.00e-128	452.00
IUUC-Sit-110823	Setaria italica	54.66	2.00e-155	541.00
IUUC-Sly-111605	Solanum lycopersicum	67.98	0.00e+00	652.00
IUUC-Stu-111978	Solanum tuberosum	69.17	0.00e+00	687.00
IUUC-Sbi-114455	Sorghum bicolor	54.11	1.00e-153	535.00
IUUC-Tgu-116760	Taeniopygia guttata	33.87	4.00e-34	139.00
IUUC-Tsy-119579	Tarsius syrichta	35.26	1.00e-60	226.00
IUUC-Tae-125798	Triticum aestivum	54.05	2.00e-142	498.00
IUUC-Tur-126381	Triticum urartu	49.41	1.00e-121	428.00
IUUC-Ttr-128231	Tursiops truncatus	34.50	3.00e-63	235.00
IUUC-Vpa-130377	Vicugna pacos	29.82	1.00e-47	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence