iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012730

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02063606

Gene Name

KDM2A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000044032.2	ENSBTAT00000061554.2	ENSBTAP00000053688.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.40e-10	40.1	622	680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek......slveCekCrewfHpaClkls....veeelpnsekwiCpkCrs 53
            C +Cge +++e+      +l+eC++C+e++Hp+Cl++      +eelpn+  w+CpkC +
   Q: 622  TCSLCGEVDQNEEtqdfekKLMECCICNEIVHPGCLQMDgeglLNEELPNC--WECPKCYQ 680
           7*********995555666***********************99*******..******76 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

VVHSKDRLYS KKLKRGTMRR RYEDDGISDD EIEGKRTFDL EEKLHTNKYN ANFVTFMEGK 60
VTDFNVEYIQ RGGLRDPLIF KNSDGLGIKM PDPDFTVNDV KMCVGSRRMV DVMDVNTQKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTACACA GTAAAGATCG TTTATACAGC AAAAAATTAA AATAAAAAAT GAAATTATGT 60
AATACACGGT CTGTTGTGTT TGGCATCTTT CACTTAGTAT GTTGTTCTCA AGATTCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR003347--JmjC_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF02373--JmjC
PF16866--PHD_4
PF02008--zf-CXXC

SMART

SM00558--JmjC
SM00367--LRR_CC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006303--P:double-strand break repair via nonhomologous end joining
GO:0070544--P:histone H3-K36 demethylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003192	Anas platyrhynchos	64.21	0.00e+00	823.00
IUUC-Aca-004576	Anolis carolinensis	74.94	0.00e+00	1650.00
IUUC-Ago-007912	Ashbya gossypii	35.16	3.00e-49	189.00
IUUC-Ame-011753	Astyanax mexicanus	74.93	9.00e-159	554.00
IUUC-Bra-016717	Brassica rapa	24.20	3.00e-09	55.80
IUUC-Cja-019030	Callithrix jacchus	86.66	0.00e+00	1851.00
IUUC-Cfa-020644	Canis familiaris	87.44	0.00e+00	1858.00
IUUC-Cpo-022055	Cavia porcellus	85.97	0.00e+00	1824.00
IUUC-Csa-023379	Chlorocebus sabaeus	87.42	0.00e+00	1841.00
IUUC-Cho-024541	Choloepus hoffmanni	65.58	0.00e+00	1173.00
IUUC-Dno-029268	Dasypus novemcinctus	87.54	0.00e+00	1845.00
IUUC-Dor-031142	Dipodomys ordii	98.37	0.00e+00	1025.00
IUUC-Ete-032467	Echinops telfairi	95.37	0.00e+00	1188.00
IUUC-Eca-033526	Equus caballus	87.01	0.00e+00	1845.00
IUUC-Eeu-035273	Erinaceus europaeus	70.67	0.00e+00	1156.00
IUUC-Fca-035532	Felis catus	87.31	0.00e+00	1841.00
IUUC-Fal-037140	Ficedula albicollis	77.71	0.00e+00	1697.00
IUUC-Gmo-038932	Gadus morhua	52.62	0.00e+00	676.00
IUUC-Gga-040418	Gallus gallus	68.51	0.00e+00	872.00
IUUC-Gac-041674	Gasterosteus aculeatus	52.04	0.00e+00	1071.00
IUUC-Ggo-045330	Gorilla gorilla	93.88	0.00e+00	801.00
IUUC-Hsa-046180	Homo sapiens	87.35	0.00e+00	1863.00
IUUC-Itr-048198	Ictidomys tridecemlineatus	88.89	0.00e+00	1244.00
IUUC-Lch-049730	Latimeria chalumnae	53.81	0.00e+00	827.00
IUUC-Laf-053939	Loxodonta africana	87.13	0.00e+00	1852.00
IUUC-Mcc-054600	Macaca mulatta	87.18	0.00e+00	1847.00
IUUC-Meu-056314	Macropus eugenii	95.63	0.00e+00	1152.00
IUUC-Mga-059549	Meleagris gallopavo	64.93	0.00e+00	892.00
IUUC-Mmr-060865	Microcebus murinus	87.26	0.00e+00	1855.00
IUUC-Mdo-062567	Monodelphis domestica	84.28	0.00e+00	1806.00
IUUC-Mmu-063782	Mus musculus	85.46	0.00e+00	1823.00
IUUC-Mpu-066055	Mustela putorius furo	87.26	0.00e+00	1858.00
IUUC-Mlu-067228	Myotis lucifugus	72.19	0.00e+00	879.00
IUUC-Nle-069668	Nomascus leucogenys	87.26	0.00e+00	1845.00
IUUC-Opr-070225	Ochotona princeps	85.20	0.00e+00	1824.00
IUUC-Ont-071349	Oreochromis niloticus	49.91	0.00e+00	972.00
IUUC-Ocu-074710	Oryctolagus cuniculus	86.66	0.00e+00	1835.00
IUUC-Ola-087410	Oryzias latipes	51.65	0.00e+00	671.00
IUUC-Oga-088644	Otolemur garnettii	87.00	0.00e+00	1785.00
IUUC-Oar-089193	Ovis aries	86.76	0.00e+00	1837.00
IUUC-Ptr-091523	Pan troglodytes	87.35	0.00e+00	1863.00
IUUC-Pan-092415	Papio anubis	87.26	0.00e+00	1851.00
IUUC-Psi-093607	Pelodiscus sinensis	91.28	0.00e+00	1056.00
IUUC-Ppa-095609	Physcomitrella patens	42.46	5.00e-58	217.00
IUUC-Pfo-096910	Poecilia formosa	53.43	0.00e+00	659.00
IUUC-Pab-098580	Pongo abelii	98.96	0.00e+00	1243.00
IUUC-Pca-100670	Procavia capensis	79.77	0.00e+00	1269.00
IUUC-Pva-102416	Pteropus vampyrus	79.38	0.00e+00	1657.00
IUUC-Rno-105814	Rattus norvegicus	85.89	0.00e+00	1833.00
IUUC-Sha-106693	Sarcophilus harrisii	83.55	0.00e+00	1678.00
IUUC-Sja-107763	Schizosaccharomyces japonicus	34.10	6.00e-43	169.00
IUUC-Smo-109024	Selaginella moellendorffii	36.19	4.00e-57	216.00
IUUC-Sar-113568	Sorex araneus	84.17	0.00e+00	1762.00
IUUC-Ssc-116337	Sus scrofa	83.20	0.00e+00	1283.00
IUUC-Tgu-117298	Taeniopygia guttata	77.99	0.00e+00	1694.00
IUUC-Tru-118423	Takifugu rubripes	50.30	0.00e+00	1015.00
IUUC-Tsy-119293	Tarsius syrichta	86.60	0.00e+00	1785.00
IUUC-Tni-120020	Tetraodon nigroviridis	68.63	3.00e-150	526.00
IUUC-Tbe-127450	Tupaia belangeri	75.72	0.00e+00	1497.00
IUUC-Ttr-128837	Tursiops truncatus	89.66	0.00e+00	928.00
IUUC-Vpa-130655	Vicugna pacos	78.23	0.00e+00	1236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence