iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117603

Ensembl Protein ID

ENSTRUP00000031816.1

UniProt Accession

H2U4F4; H2U4F4_TAKRU

Protein Name

Uncharacterized protein

Gene Name

arpc1a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000012566.1	ENSTRUT00000031939.1	ENSTRUP00000031816.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-13	49.4	51	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++ +t++++ +  +++v+++ D + +vW+ ++
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKE 83
           9999*******6669**************9655 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSLHQFLLEP ITCHAWNRDR TQIAISPNNH EVHIYKKSGN QWLKTHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKEGVWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTGGAGCG TTGTTGCTAG CGCGATGATG CTAAGCTAGC TGTCAGCCAG ACATCCGCGG 60
GTTTTACTGC CGAGTTAGCT GCCAGATGCT CCCGGTCATA TCCTTCTTGC CATCTTGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002044	Ailuropoda melanoleuca	87.23	0.00e+00	668.00
IUUC-Atr-002844	Amborella trichopoda	47.27	2.00e-53	202.00
IUUC-Apl-003325	Anas platyrhynchos	89.36	0.00e+00	706.00
IUUC-Aca-004736	Anolis carolinensis	89.10	0.00e+00	702.00
IUUC-Aly-006568	Arabidopsis lyrata	41.11	1.00e-79	289.00
IUUC-Ath-006683	Arabidopsis thaliana	40.85	5.00e-79	287.00
IUUC-Ago-007966	Ashbya gossypii	38.42	2.00e-65	242.00
IUUC-Acl-008334	Aspergillus clavatus	47.92	7.00e-96	343.00
IUUC-Afl-008485	Aspergillus flavus	47.92	6.00e-92	332.00
IUUC-Afu-008780	Aspergillus fumigatus	47.65	3.00e-96	345.00
IUUC-Ani-009417	Aspergillus nidulans	48.06	1.00e-95	342.00
IUUC-Ang-009543	Aspergillus niger	49.44	3.00e-97	348.00
IUUC-Aor-010234	Aspergillus oryzae	48.20	9.00e-94	336.00
IUUC-Ate-010386	Aspergillus terreus	48.75	8.00e-98	350.00
IUUC-Ame-011852	Astyanax mexicanus	89.63	0.00e+00	709.00
IUUC-Bgr-012192	Blumeria graminis	43.65	2.00e-86	312.00
IUUC-Bta-012530	Bos taurus	87.23	0.00e+00	667.00
IUUC-Bci-013616	Botrytis cinerea	46.43	4.00e-91	328.00
IUUC-Bdi-014632	Brachypodium distachyon	41.51	4.00e-78	285.00
IUUC-Bra-016790	Brassica rapa	40.74	2.00e-80	292.00
IUUC-Cel-018122	Caenorhabditis elegans	54.72	9.00e-110	389.00
IUUC-Cja-019362	Callithrix jacchus	86.97	0.00e+00	667.00
IUUC-Cfa-020167	Canis familiaris	87.23	0.00e+00	668.00
IUUC-Cpo-021933	Cavia porcellus	87.23	0.00e+00	669.00
IUUC-Cho-024449	Choloepus hoffmanni	65.85	1.00e-86	312.00
IUUC-Cin-025186	Ciona intestinalis	55.47	3.00e-117	415.00
IUUC-Csv-026275	Ciona savignyi	55.18	2.00e-113	402.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	45.83	3.00e-91	328.00
IUUC-Cne-026926	Cryptococcus neoformans	46.67	6.00e-100	357.00
IUUC-Dre-028057	Danio rerio	89.36	0.00e+00	707.00
IUUC-Dno-029092	Dasypus novemcinctus	87.36	0.00e+00	643.00
IUUC-Dor-030391	Dipodomys ordii	86.81	0.00e+00	642.00
IUUC-Dse-031574	Dothistroma septosporum	44.47	9.00e-85	306.00
IUUC-Dme-031907	Drosophila melanogaster	54.16	7.00e-122	430.00
IUUC-Eca-034074	Equus caballus	87.23	0.00e+00	667.00
IUUC-Eeu-035041	Erinaceus europaeus	67.35	2.00e-80	292.00
IUUC-Fca-036154	Felis catus	87.23	0.00e+00	668.00
IUUC-Fal-037279	Ficedula albicollis	89.36	0.00e+00	704.00
IUUC-Fox-037842	Fusarium oxysporum	46.39	3.00e-90	325.00
IUUC-Fso-038276	Fusarium solani	46.11	2.00e-90	326.00
IUUC-Gmo-039673	Gadus morhua	92.02	0.00e+00	680.00
IUUC-Ggr-039762	Gaeumannomyces graminis	44.88	1.00e-88	320.00
IUUC-Gga-040189	Gallus gallus	89.10	0.00e+00	702.00
IUUC-Gac-042531	Gasterosteus aculeatus	94.41	0.00e+00	692.00
IUUC-Gma-042803	Glycine max	41.82	1.00e-78	286.00
IUUC-Hsa-046309	Homo sapiens	87.23	0.00e+00	668.00
IUUC-Hvu-047456	Hordeum vulgare	28.57	4.00e-17	80.90
IUUC-Itr-047864	Ictidomys tridecemlineatus	87.23	0.00e+00	668.00
IUUC-Kpa-049288	Komagataella pastoris	40.92	9.00e-76	276.00
IUUC-Lch-050427	Latimeria chalumnae	86.47	0.00e+00	683.00
IUUC-Lpe-050869	Leersia perrieri	40.87	3.00e-78	285.00
IUUC-Loc-052532	Lepisosteus oculatus	88.62	0.00e+00	687.00
IUUC-Lma-053109	Leptosphaeria maculans	45.21	2.00e-89	322.00
IUUC-Laf-054271	Loxodonta africana	87.23	0.00e+00	668.00
IUUC-Mcc-054857	Macaca mulatta	86.33	0.00e+00	645.00
IUUC-Meu-056540	Macropus eugenii	83.90	5.00e-167	580.00
IUUC-Mor-057167	Magnaporthe oryzae	44.20	8.00e-88	317.00
IUUC-Mtr-057659	Medicago truncatula	43.09	6.00e-80	290.00
IUUC-Mla-058886	Melampsora laricipopulina	44.81	1.00e-93	336.00
IUUC-Mga-059327	Meleagris gallopavo	89.10	0.00e+00	702.00
IUUC-Mvi-060302	Microbotryum violaceum	46.37	3.00e-96	345.00
IUUC-Mmr-060765	Microcebus murinus	86.10	0.00e+00	649.00
IUUC-Mdo-062326	Monodelphis domestica	88.03	0.00e+00	676.00
IUUC-Mmu-063819	Mus musculus	86.97	0.00e+00	667.00
IUUC-Mac-064632	Musa acuminata	40.70	4.00e-79	288.00
IUUC-Mlu-067184	Myotis lucifugus	87.23	0.00e+00	669.00
IUUC-Nfi-068383	Neosartorya fischeri	47.92	4.00e-96	344.00
IUUC-Ncr-068777	Neurospora crassa	44.93	1.00e-89	322.00
IUUC-Nle-069900	Nomascus leucogenys	87.23	0.00e+00	667.00
IUUC-Opr-070386	Ochotona princeps	78.99	1.00e-168	585.00
IUUC-Ont-071283	Oreochromis niloticus	94.15	0.00e+00	692.00
IUUC-Oan-073139	Ornithorhynchus anatinus	87.77	0.00e+00	674.00
IUUC-Ocu-074340	Oryctolagus cuniculus	87.23	0.00e+00	668.00
IUUC-Oba-075379	Oryza barthii	41.42	4.00e-78	285.00
IUUC-Obr-076404	Oryza brachyantha	41.03	1.00e-79	289.00
IUUC-Ogl-077409	Oryza glaberrima	38.59	2.00e-71	262.00
IUUC-Ogu-078759	Oryza glumaepatula	41.42	4.00e-78	285.00
IUUC-Oin-079118	Oryza indica	41.30	1.00e-78	286.00
IUUC-Olo-081055	Oryza longistaminata	44.98	5.00e-67	248.00
IUUC-Ome-081281	Oryza meridionalis	41.42	5.00e-78	284.00
IUUC-Oni-083043	Oryza nivara	41.42	4.00e-78	285.00
IUUC-Opu-083392	Oryza punctata	33.24	2.00e-55	209.00
IUUC-Oru-084839	Oryza rufipogon	41.42	4.00e-78	285.00
IUUC-Osa-085377	Oryza sativa	41.30	2.00e-78	285.00
IUUC-Ola-087274	Oryzias latipes	90.96	0.00e+00	664.00
IUUC-Oga-088016	Otolemur garnettii	86.97	0.00e+00	666.00
IUUC-Oar-089613	Ovis aries	86.97	0.00e+00	665.00
IUUC-Ptr-091548	Pan troglodytes	87.23	0.00e+00	668.00
IUUC-Psi-093767	Pelodiscus sinensis	89.36	0.00e+00	704.00
IUUC-Pma-094124	Petromyzon marinus	77.75	5.00e-179	620.00
IUUC-Pno-095031	Phaeosphaeria nodorum	45.08	1.00e-87	316.00
IUUC-Ppa-095858	Physcomitrella patens	46.79	3.00e-86	311.00
IUUC-Pfo-097107	Poecilia formosa	93.35	0.00e+00	684.00
IUUC-Pop-098954	Populus trichocarpa	35.96	3.00e-42	165.00
IUUC-Pva-102908	Pteropus vampyrus	84.46	1.00e-167	582.00
IUUC-Pgr-103309	Puccinia graminis	43.97	5.00e-93	334.00
IUUC-Ptt-103959	Puccinia triticina	44.55	8.00e-96	343.00
IUUC-Pte-104384	Pyrenophora teres	45.83	5.00e-89	320.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	46.11	7.00e-89	320.00
IUUC-Rno-105008	Rattus norvegicus	86.19	1.00e-167	582.00
IUUC-Sha-106691	Sarcophilus harrisii	87.67	0.00e+00	669.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	47.18	2.00e-91	328.00
IUUC-Spo-108053	Schizosaccharomyces pombe	43.73	4.00e-89	321.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	46.83	1.00e-91	329.00
IUUC-Smo-108836	Selaginella moellendorffii	44.85	3.00e-83	301.00
IUUC-Sit-110150	Setaria italica	41.94	1.00e-80	293.00
IUUC-Sly-111048	Solanum lycopersicum	40.97	1.00e-77	283.00
IUUC-Sar-113599	Sorex araneus	76.10	4.00e-158	550.00
IUUC-Sbi-114685	Sorghum bicolor	42.32	8.00e-77	280.00
IUUC-Sre-115090	Sporisorium reilianum	45.23	4.00e-95	341.00
IUUC-Ssc-115851	Sus scrofa	87.50	0.00e+00	669.00
IUUC-Tgu-116701	Taeniopygia guttata	89.36	0.00e+00	704.00
IUUC-Tsy-119515	Tarsius syrichta	84.72	5.00e-72	264.00
IUUC-Tni-119844	Tetraodon nigroviridis	94.41	0.00e+00	680.00
IUUC-Tca-121645	Theobroma cacao	41.87	2.00e-80	292.00
IUUC-Tre-122045	Trichoderma reesei	46.54	2.00e-90	325.00
IUUC-Tvi-122523	Trichoderma virens	46.41	4.00e-90	324.00
IUUC-Tae-125810	Triticum aestivum	38.05	4.00e-72	265.00
IUUC-Tme-127018	Tuber melanosporum	46.05	1.00e-87	316.00
IUUC-Tbe-127321	Tupaia belangeri	86.49	2.00e-168	584.00
IUUC-Ttr-128178	Tursiops truncatus	86.72	8.00e-180	622.00
IUUC-Uma-129423	Ustilago maydis	44.96	9.00e-97	347.00
IUUC-Vda-129706	Verticillium dahliae	46.01	3.00e-91	328.00
IUUC-Xtr-132735	Xenopus tropicalis	79.84	5.00e-174	603.00
IUUC-Xma-133435	Xiphophorus maculatus	93.35	0.00e+00	684.00
IUUC-Zma-135615	Zea mays	40.83	1.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence