iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012257

Ensembl Protein ID

CCU80256

UniProt Accession

N1JFD5; N1JFD5_BLUG1

Genbank Protein ID

CCU80256.1

Protein Name

Putative transcription initiation factor TFIID

Genbank Nucleotide ID

CAUH01004600

Gene Name

BGHDH14_bgh00186

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh00186	CCU80256	CCU80256

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-33	110.8	454	484
UBD/Beta-Prp	5.80e-53	178.4	342	618

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v+++++   +++++++++D+t++vW 
   Q: 454  GHEGPVWDVRWgpFGHYFATCGRDKTVRVWG 484
           8**********96449**************6 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl............lrslsgheaevtavkfspdgk..............ilvtgseDrtikvwd 80
           +++  + itc+ fs+d +l+a+g + + i+vw++  + l             r+l gh+a+v+ ++fsp                 +l+++s+D+ti++w+
   Q: 342  FHNTLDCITCIEFSDDHTLIAAGTEESYIRVWSMVGEPLhvilsgekqptnSRRLIGHSAPVYGLSFSPAIAgsehvdsalstrpkLLLSCSSDKTIRLWS 442
           5677789********************************99999999999999999999997777777765555666677777777*************** PP
   S: 81   lstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl..DrtvrlWdlktgkllrtltggh 179
           l+t +c++++kghe  v+++++ p g+++++ ++d+t+rvw  ++ + l+ +  ghd +vn +++hp+g +++s+s+  D+ vr+W   tg+++r + g h
   Q: 443  LETWSCLVVYKGHEGPVWDVRWGPFGHYFATCGRDKTVRVWGQDHISFLR-MMVGHDTSVNKIAWHPNGAYIFSASDlsDKSVRMWAFTTGECVRVFCG-H 541
           **************************************************.************************9666*******************9.* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrsgd 255
            d +  l+ +++gk l+s+++ gt++lwd+ tg   ++++gh    ++s+ fs ++++lvsg++D ++r Wd++ ++
   Q: 542  LDFISALACSPSGKILASADCSGTIILWDIITGLPTKRCKGHGkGGIWSLSFSVESTILVSGGADCTVRTWDIEISN 618
           *****************************************96479**************************98555 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MVIEILLLSS PTNLTNQVIE YLVKKGYNRT EQMLRHESSR LDKEGRPIQD RVEDLGHLKY 60
RRAFEMLLNW IDSNLDIYKL ELNRLPWPIF VYSYLSLVKD EATVERDIFF NHFSSSFERF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTATAG AAATATTGTT ACTTTCATCA CCTACTAATC TTACGAATCA GGTCATAGAA 60
TACCTAGTTA AGAAAGGCTA TAACCGGACA GAGCAAATGC TCCGCCATGA ATCGTCTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0003743--F:translation initiation factor activity
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	33.91	9.00e-54	203.00
IUUC-Aml-001607	Ailuropoda melanoleuca	34.42	2.00e-66	245.00
IUUC-Atr-003136	Amborella trichopoda	29.19	3.00e-77	281.00
IUUC-Apl-004193	Anas platyrhynchos	29.74	6.00e-74	270.00
IUUC-Aca-004522	Anolis carolinensis	29.62	2.00e-75	275.00
IUUC-Aly-006476	Arabidopsis lyrata	31.54	9.00e-85	305.00
IUUC-Ath-006587	Arabidopsis thaliana	31.14	1.00e-81	295.00
IUUC-Ago-007736	Ashbya gossypii	44.44	5.00e-96	343.00
IUUC-Acl-008092	Aspergillus clavatus	51.29	0.00e+00	674.00
IUUC-Afl-008659	Aspergillus flavus	50.57	0.00e+00	686.00
IUUC-Afu-008902	Aspergillus fumigatus	51.28	0.00e+00	669.00
IUUC-Ani-009462	Aspergillus nidulans	50.41	8.00e-165	571.00
IUUC-Aor-010083	Aspergillus oryzae	50.43	0.00e+00	683.00
IUUC-Ate-010271	Aspergillus terreus	50.64	0.00e+00	674.00
IUUC-Ame-010721	Astyanax mexicanus	29.50	1.00e-76	278.00
IUUC-Bta-013539	Bos taurus	28.93	5.00e-71	260.00
IUUC-Bci-013737	Botrytis cinerea	64.16	0.00e+00	928.00
IUUC-Bdi-015041	Brachypodium distachyon	37.40	8.00e-61	226.00
IUUC-Bol-015483	Brassica oleracea	31.36	2.00e-82	298.00
IUUC-Bra-017147	Brassica rapa	31.18	2.00e-82	297.00
IUUC-Cel-018451	Caenorhabditis elegans	24.03	7.00e-42	163.00
IUUC-Cja-018881	Callithrix jacchus	29.95	3.00e-74	271.00
IUUC-Cfa-020056	Canis familiaris	29.95	2.00e-74	271.00
IUUC-Cpo-021454	Cavia porcellus	29.05	7.00e-77	280.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	33.01	1.00e-39	155.00
IUUC-Csa-023045	Chlorocebus sabaeus	29.80	4.00e-75	273.00
IUUC-Cho-024284	Choloepus hoffmanni	38.95	8.00e-54	203.00
IUUC-Cin-025457	Ciona intestinalis	36.81	5.00e-50	189.00
IUUC-Csv-025882	Ciona savignyi	33.49	8.00e-61	226.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	53.09	0.00e+00	756.00
IUUC-Cne-026876	Cryptococcus neoformans	33.76	8.00e-88	316.00
IUUC-Cme-027302	Cyanidioschyzon merolae	32.53	2.00e-51	194.00
IUUC-Dre-027980	Danio rerio	35.98	2.00e-70	258.00
IUUC-Dno-028863	Dasypus novemcinctus	29.95	2.00e-74	272.00
IUUC-Dor-030561	Dipodomys ordii	29.95	2.00e-74	271.00
IUUC-Dse-031547	Dothistroma septosporum	46.05	2.00e-171	594.00
IUUC-Dme-031917	Drosophila melanogaster	31.54	7.00e-57	213.00
IUUC-Ete-032712	Echinops telfairi	35.69	3.00e-44	171.00
IUUC-Eca-033927	Equus caballus	29.80	1.00e-76	278.00
IUUC-Eeu-034449	Erinaceus europaeus	37.13	5.00e-63	233.00
IUUC-Fca-036325	Felis catus	28.78	1.00e-70	259.00
IUUC-Fal-036604	Ficedula albicollis	29.59	9.00e-76	276.00
IUUC-Fox-038049	Fusarium oxysporum	49.51	0.00e+00	645.00
IUUC-Fso-038302	Fusarium solani	50.99	0.00e+00	689.00
IUUC-Gmo-038832	Gadus morhua	28.81	6.00e-75	273.00
IUUC-Ggr-039878	Gaeumannomyces graminis	49.53	0.00e+00	729.00
IUUC-Gga-041147	Gallus gallus	30.05	4.00e-78	284.00
IUUC-Gac-041373	Gasterosteus aculeatus	34.42	3.00e-68	251.00
IUUC-Gma-044041	Glycine max	30.26	7.00e-80	289.00
IUUC-Ggo-044568	Gorilla gorilla	35.69	3.00e-44	171.00
IUUC-Hsa-045971	Homo sapiens	28.78	8.00e-71	259.00
IUUC-Hvu-047695	Hordeum vulgare	37.77	6.00e-61	226.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	29.95	1.00e-74	272.00
IUUC-Kpa-049402	Komagataella pastoris	35.99	9.00e-119	419.00
IUUC-Lch-049526	Latimeria chalumnae	32.09	2.00e-58	218.00
IUUC-Lpe-051560	Leersia perrieri	34.87	4.00e-64	237.00
IUUC-Loc-052882	Lepisosteus oculatus	30.17	4.00e-79	287.00
IUUC-Lma-053212	Leptosphaeria maculans	46.41	1.00e-153	535.00
IUUC-Laf-053859	Loxodonta africana	28.78	1.00e-70	259.00
IUUC-Mcc-054957	Macaca mulatta	34.42	3.00e-66	244.00
IUUC-Meu-056182	Macropus eugenii	35.23	8.00e-44	169.00
IUUC-Mor-057024	Magnaporthe oryzae	52.64	0.00e+00	667.00
IUUC-Mpo-057520	Magnaporthe poae	50.14	0.00e+00	689.00
IUUC-Mtr-058754	Medicago truncatula	30.14	4.00e-80	290.00
IUUC-Mla-058881	Melampsora laricipopulina	37.70	2.00e-72	265.00
IUUC-Mga-059776	Meleagris gallopavo	30.05	4.00e-78	283.00
IUUC-Mvi-060208	Microbotryum violaceum	41.92	1.00e-79	289.00
IUUC-Mmr-061783	Microcebus murinus	34.42	3.00e-66	244.00
IUUC-Mdo-062856	Monodelphis domestica	30.11	5.00e-76	277.00
IUUC-Mmu-064218	Mus musculus	28.78	8.00e-71	259.00
IUUC-Mac-064886	Musa acuminata	39.36	1.00e-49	189.00
IUUC-Mpu-065735	Mustela putorius furo	29.95	2.00e-74	271.00
IUUC-Mlu-067544	Myotis lucifugus	28.74	2.00e-69	254.00
IUUC-Nfi-068502	Neosartorya fischeri	51.57	0.00e+00	674.00
IUUC-Ncr-068891	Neurospora crassa	51.55	0.00e+00	731.00
IUUC-Nle-069389	Nomascus leucogenys	28.78	8.00e-71	259.00
IUUC-Opr-071042	Ochotona princeps	32.27	4.00e-56	210.00
IUUC-Ont-071455	Oreochromis niloticus	34.42	2.00e-69	254.00
IUUC-Oan-073181	Ornithorhynchus anatinus	29.50	5.00e-75	273.00
IUUC-Ocu-073758	Oryctolagus cuniculus	29.80	1.00e-76	279.00
IUUC-Oba-075739	Oryza barthii	37.99	2.00e-53	201.00
IUUC-Obr-076111	Oryza brachyantha	29.85	5.00e-79	286.00
IUUC-Ogl-077914	Oryza glaberrima	30.39	3.00e-67	247.00
IUUC-Ogu-078057	Oryza glumaepatula	45.45	5.00e-49	187.00
IUUC-Oin-079473	Oryza indica	30.95	5.00e-70	256.00
IUUC-Olo-080557	Oryza longistaminata	39.69	2.00e-53	201.00
IUUC-Ome-081831	Oryza meridionalis	45.45	4.00e-49	187.00
IUUC-Oni-082441	Oryza nivara	45.45	7.00e-49	186.00
IUUC-Opu-083325	Oryza punctata	29.01	6.00e-63	233.00
IUUC-Oru-085131	Oryza rufipogon	45.45	8.00e-49	186.00
IUUC-Osa-086189	Oryza sativa	31.10	2.00e-70	258.00
IUUC-Ola-086574	Oryzias latipes	29.95	3.00e-79	288.00
IUUC-Olu-087616	Ostreococcus lucimarinus	35.69	1.00e-55	209.00
IUUC-Oga-088827	Otolemur garnettii	29.95	3.00e-74	271.00
IUUC-Oar-089648	Ovis aries	30.11	9.00e-75	273.00
IUUC-Ptr-091195	Pan troglodytes	28.78	9.00e-71	259.00
IUUC-Pan-091978	Papio anubis	29.95	2.00e-74	271.00
IUUC-Psi-093598	Pelodiscus sinensis	29.78	3.00e-71	260.00
IUUC-Pma-094593	Petromyzon marinus	32.66	2.00e-39	155.00
IUUC-Pno-094823	Phaeosphaeria nodorum	45.71	8.00e-154	535.00
IUUC-Ppa-095455	Physcomitrella patens	28.30	5.00e-72	263.00
IUUC-Pfo-097120	Poecilia formosa	35.35	3.00e-70	258.00
IUUC-Pab-098771	Pongo abelii	28.78	8.00e-71	259.00
IUUC-Pop-099542	Populus trichocarpa	30.58	2.00e-81	295.00
IUUC-Pca-100727	Procavia capensis	35.35	3.00e-44	171.00
IUUC-Ppe-101686	Prunus persica	29.44	4.00e-76	276.00
IUUC-Pva-102414	Pteropus vampyrus	30.47	9.00e-48	183.00
IUUC-Pgr-103603	Puccinia graminis	29.40	2.00e-80	292.00
IUUC-Ptt-103995	Puccinia triticina	28.45	1.00e-64	239.00
IUUC-Pte-104359	Pyrenophora teres	47.35	1.00e-163	568.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	47.70	3.00e-161	560.00
IUUC-Rno-105064	Rattus norvegicus	28.89	7.00e-71	259.00
IUUC-Sce-106186	Saccharomyces cerevisiae	33.00	2.00e-112	397.00
IUUC-Sha-106582	Sarcophilus harrisii	29.95	3.00e-76	277.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	36.02	1.00e-118	418.00
IUUC-Spo-108142	Schizosaccharomyces pombe	37.81	2.00e-126	444.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	63.16	0.00e+00	912.00
IUUC-Smo-109097	Selaginella moellendorffii	30.96	5.00e-79	286.00
IUUC-Sit-109804	Setaria italica	30.34	7.00e-77	279.00
IUUC-Sly-111693	Solanum lycopersicum	30.13	3.00e-72	264.00
IUUC-Sar-113381	Sorex araneus	35.69	2.00e-47	181.00
IUUC-Sbi-114849	Sorghum bicolor	31.27	3.00e-77	280.00
IUUC-Sre-114945	Sporisorium reilianum	33.87	2.00e-73	268.00
IUUC-Ssc-115582	Sus scrofa	33.03	1.00e-62	232.00
IUUC-Tgu-116899	Taeniopygia guttata	29.74	7.00e-76	276.00
IUUC-Tru-118011	Takifugu rubripes	35.12	2.00e-67	248.00
IUUC-Tsy-119622	Tarsius syrichta	28.72	3.00e-27	114.00
IUUC-Tni-120598	Tetraodon nigroviridis	34.49	2.00e-66	245.00
IUUC-Tca-121247	Theobroma cacao	29.91	2.00e-83	301.00
IUUC-Tre-121949	Trichoderma reesei	53.21	0.00e+00	684.00
IUUC-Tvi-122626	Trichoderma virens	52.95	0.00e+00	729.00
IUUC-Tae-123335	Triticum aestivum	38.30	8.00e-64	236.00
IUUC-Tur-126316	Triticum urartu	34.44	3.00e-57	214.00
IUUC-Tme-126904	Tuber melanosporum	42.29	3.00e-138	483.00
IUUC-Tbe-127254	Tupaia belangeri	30.39	4.00e-47	181.00
IUUC-Ttr-128544	Tursiops truncatus	28.78	6.00e-71	260.00
IUUC-Uma-129379	Ustilago maydis	33.66	1.00e-70	259.00
IUUC-Vda-129761	Verticillium dahliae	49.30	0.00e+00	650.00
IUUC-Vpa-130485	Vicugna pacos	28.78	1.00e-70	259.00
IUUC-Vvi-131171	Vitis vinifera	29.40	2.00e-78	285.00
IUUC-Xtr-132762	Xenopus tropicalis	25.66	2.00e-53	202.00
IUUC-Xma-133583	Xiphophorus maculatus	35.35	6.00e-70	256.00
IUUC-Yli-134446	Yarrowia lipolytica	35.76	4.00e-125	440.00
IUUC-Zma-135722	Zea mays	30.97	1.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence