iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100066

Ensembl Protein ID

POPTR_0001s22040.1

UniProt Accession

B9GEU9; B9GEU9_POPTR

Genbank Protein ID

EEE84468.2

Protein Name

Vacuolar assembly family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_181203; POPTR_0001s22040g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s22040	POPTR_0001s22040.1	POPTR_0001s22040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-07	30.1	97	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikv 27
           Ht+ v++l+f   + ++ s+sdDgt+ +
   Q: 97   HTAAVNDLSFdiEGEYIGSCSDDGTVVI 124
           9*********87449**********987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTPITSENGV DGDDEREEEE EDDDDEEEEE EEEEEEEEEE EPRLKYQRMG GSIPSLLSND 60
AASCIAVAER MIALGTLDGT VHILDFLGNQ VKEFAAHTAA VNDLSFDIEG EYIGSCSDDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCCAA TTACGTCGGA GAATGGTGTC GATGGCGACG ACGAGCGAGA AGAAGAAGAG 60
GAAGATGATG ATGATGAAGA AGAAGAAGAA GAAGAAGAAG AAGAAGAGGA GGAGGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50294--WD_REPEATS_REGION

Pfam

PF00637--Clathrin

SMART

SM00299--CLH
SM00320--WD40

Gene Ontology

GO:0033263--C:CORVET complex
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0051020--F:GTPase binding
GO:0006623--P:protein targeting to vacuole
GO:0035542--P:regulation of SNARE complex assembly
GO:0042144--P:vacuole fusion, non-autophagic
GO:0016192--P:vesicle-mediated transport

KEGG

pop:POPTR_0001s22040g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	67.94	0.00e+00	1251.00
IUUC-Aml-001435	Ailuropoda melanoleuca	36.13	1.00e-160	560.00
IUUC-Atr-002975	Amborella trichopoda	75.47	0.00e+00	1394.00
IUUC-Apl-003254	Anas platyrhynchos	36.43	1.00e-156	546.00
IUUC-Aca-005067	Anolis carolinensis	35.60	1.00e-156	546.00
IUUC-Aly-005839	Arabidopsis lyrata	76.39	0.00e+00	1483.00
IUUC-Ath-006625	Arabidopsis thaliana	76.73	0.00e+00	1493.00
IUUC-Ago-007960	Ashbya gossypii	25.81	5.00e-71	262.00
IUUC-Acl-008174	Aspergillus clavatus	25.00	6.00e-47	182.00
IUUC-Ang-009665	Aspergillus niger	24.98	2.00e-66	247.00
IUUC-Ate-010464	Aspergillus terreus	24.15	1.00e-42	168.00
IUUC-Ame-011311	Astyanax mexicanus	34.63	4.00e-127	448.00
IUUC-Bgr-012099	Blumeria graminis	26.71	5.00e-55	209.00
IUUC-Bta-013327	Bos taurus	36.46	8.00e-161	560.00
IUUC-Bdi-014641	Brachypodium distachyon	69.07	0.00e+00	1296.00
IUUC-Bol-015685	Brassica oleracea	78.34	0.00e+00	1514.00
IUUC-Bra-016918	Brassica rapa	77.36	0.00e+00	1506.00
IUUC-Cja-018994	Callithrix jacchus	36.06	3.00e-159	555.00
IUUC-Cfa-020405	Canis familiaris	36.13	7.00e-160	557.00
IUUC-Cpo-022163	Cavia porcellus	35.95	2.00e-159	555.00
IUUC-Csa-023134	Chlorocebus sabaeus	36.46	5.00e-162	564.00
IUUC-Cho-024913	Choloepus hoffmanni	36.19	4.00e-99	355.00
IUUC-Cin-025239	Ciona intestinalis	36.61	4.00e-150	525.00
IUUC-Dre-028115	Danio rerio	34.78	2.00e-159	555.00
IUUC-Dor-030947	Dipodomys ordii	36.80	1.00e-150	526.00
IUUC-Dse-031544	Dothistroma septosporum	26.17	2.00e-46	181.00
IUUC-Ete-033051	Echinops telfairi	36.33	2.00e-46	180.00
IUUC-Eca-033501	Equus caballus	36.46	1.00e-161	563.00
IUUC-Eeu-034555	Erinaceus europaeus	34.73	4.00e-78	285.00
IUUC-Fca-035809	Felis catus	36.13	1.00e-160	560.00
IUUC-Fal-037056	Ficedula albicollis	36.28	2.00e-156	546.00
IUUC-Fso-038282	Fusarium solani	24.65	8.00e-43	169.00
IUUC-Gmo-038540	Gadus morhua	35.67	5.00e-154	537.00
IUUC-Gga-040446	Gallus gallus	36.20	2.00e-155	542.00
IUUC-Gac-041462	Gasterosteus aculeatus	35.12	4.00e-154	538.00
IUUC-Gma-043148	Glycine max	84.00	0.00e+00	1607.00
IUUC-Hsa-047030	Homo sapiens	36.35	5.00e-162	564.00
IUUC-Hvu-047693	Hordeum vulgare	69.73	0.00e+00	1307.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	36.60	6.00e-161	560.00
IUUC-Kpa-049224	Komagataella pastoris	23.87	1.00e-67	251.00
IUUC-Lpe-050942	Leersia perrieri	65.86	0.00e+00	1179.00
IUUC-Loc-052260	Lepisosteus oculatus	34.85	2.00e-158	552.00
IUUC-Laf-054185	Loxodonta africana	36.72	3.00e-161	561.00
IUUC-Mcc-054816	Macaca mulatta	36.35	6.00e-162	564.00
IUUC-Meu-056483	Macropus eugenii	36.24	2.00e-49	190.00
IUUC-Mor-056979	Magnaporthe oryzae	25.22	3.00e-50	193.00
IUUC-Mtr-057630	Medicago truncatula	81.25	0.00e+00	1578.00
IUUC-Mga-059942	Meleagris gallopavo	35.86	2.00e-154	539.00
IUUC-Mmr-060640	Microcebus murinus	36.35	5.00e-162	564.00
IUUC-Mdo-062934	Monodelphis domestica	33.08	2.00e-124	439.00
IUUC-Mmu-063488	Mus musculus	36.24	2.00e-161	562.00
IUUC-Mac-064975	Musa acuminata	76.81	0.00e+00	1427.00
IUUC-Mpu-065777	Mustela putorius furo	36.46	1.00e-161	563.00
IUUC-Mlu-068052	Myotis lucifugus	36.57	3.00e-161	561.00
IUUC-Nle-070063	Nomascus leucogenys	36.13	4.00e-159	554.00
IUUC-Opr-070385	Ochotona princeps	39.44	2.00e-75	276.00
IUUC-Ont-072367	Oreochromis niloticus	35.04	3.00e-153	535.00
IUUC-Oan-073085	Ornithorhynchus anatinus	35.54	6.00e-152	531.00
IUUC-Ocu-074672	Oryctolagus cuniculus	36.13	3.00e-161	561.00
IUUC-Oba-075574	Oryza barthii	71.49	0.00e+00	1340.00
IUUC-Obr-076203	Oryza brachyantha	69.01	0.00e+00	1278.00
IUUC-Ogl-077909	Oryza glaberrima	71.49	0.00e+00	1340.00
IUUC-Ogu-078053	Oryza glumaepatula	70.82	0.00e+00	1334.00
IUUC-Oin-079700	Oryza indica	71.38	0.00e+00	1338.00
IUUC-Olo-080707	Oryza longistaminata	68.04	0.00e+00	1295.00
IUUC-Oni-082754	Oryza nivara	71.35	0.00e+00	1335.00
IUUC-Opu-083854	Oryza punctata	71.13	0.00e+00	1313.00
IUUC-Oru-085071	Oryza rufipogon	70.72	0.00e+00	1332.00
IUUC-Osa-085370	Oryza sativa	71.49	0.00e+00	1340.00
IUUC-Ola-086362	Oryzias latipes	36.06	4.00e-157	548.00
IUUC-Oga-088078	Otolemur garnettii	35.82	4.00e-156	545.00
IUUC-Oar-089679	Ovis aries	36.24	2.00e-160	559.00
IUUC-Ptr-091680	Pan troglodytes	36.35	5.00e-162	564.00
IUUC-Pan-092816	Papio anubis	35.46	4.00e-108	384.00
IUUC-Psi-093890	Pelodiscus sinensis	35.66	3.00e-155	541.00
IUUC-Pma-094654	Petromyzon marinus	37.06	6.00e-172	597.00
IUUC-Ppa-095198	Physcomitrella patens	58.68	0.00e+00	1032.00
IUUC-Pfo-097465	Poecilia formosa	35.08	8.00e-156	543.00
IUUC-Pab-098686	Pongo abelii	36.35	2.00e-162	565.00
IUUC-Pca-100990	Procavia capensis	33.11	7.00e-136	477.00
IUUC-Ppe-101500	Prunus persica	84.43	0.00e+00	1597.00
IUUC-Pva-102809	Pteropus vampyrus	36.02	8.00e-161	560.00
IUUC-Rno-105949	Rattus norvegicus	37.60	2.00e-154	539.00
IUUC-Sce-106462	Saccharomyces cerevisiae	22.18	2.00e-54	207.00
IUUC-Sha-106689	Sarcophilus harrisii	35.58	5.00e-157	547.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	27.63	1.00e-87	317.00
IUUC-Spo-108173	Schizosaccharomyces pombe	29.51	4.00e-111	395.00
IUUC-Smo-109505	Selaginella moellendorffii	55.60	0.00e+00	962.00
IUUC-Sit-110176	Setaria italica	71.05	0.00e+00	1350.00
IUUC-Sly-111840	Solanum lycopersicum	80.43	0.00e+00	1556.00
IUUC-Sar-113073	Sorex araneus	32.38	4.00e-121	428.00
IUUC-Sbi-114139	Sorghum bicolor	70.93	0.00e+00	1326.00
IUUC-Ssc-115894	Sus scrofa	36.24	9.00e-161	560.00
IUUC-Tgu-117481	Taeniopygia guttata	36.31	3.00e-157	548.00
IUUC-Tru-118468	Takifugu rubripes	36.77	6.00e-151	527.00
IUUC-Tni-120478	Tetraodon nigroviridis	35.21	6.00e-152	531.00
IUUC-Tca-121780	Theobroma cacao	87.98	0.00e+00	1686.00
IUUC-Tae-122785	Triticum aestivum	70.09	0.00e+00	1325.00
IUUC-Tur-126430	Triticum urartu	70.21	0.00e+00	1276.00
IUUC-Tbe-128073	Tupaia belangeri	36.39	8.00e-134	470.00
IUUC-Ttr-128879	Tursiops truncatus	36.13	1.00e-157	550.00
IUUC-Vvi-131744	Vitis vinifera	87.11	0.00e+00	1649.00
IUUC-Xtr-132093	Xenopus tropicalis	35.56	2.00e-155	542.00
IUUC-Xma-133199	Xiphophorus maculatus	35.71	1.00e-154	539.00
IUUC-Yli-134385	Yarrowia lipolytica	27.72	4.00e-79	289.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence