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Tag Content
iUUCD ID IUUC-Lch-050441
Ensembl Protein ID ENSLACP00000010718.2
UniProt Accession H3AM47; H3AM47_LATCH
Genbank Protein ID ENSLACP00000010718
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01171143
Gene Name STRN3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000009436.2 ENSLACT00000010797.2 ENSLACP00000010718.2
ENSLACG00000009436.2 ENSLACT00000010796.1 ENSLACP00000010717.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.00e-26 90.2 576 606
UBD/Beta-Prp 1.80e-47 162.2 566 785
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDl 30
           Htd v++la+s+  ++l+s+s Dgti++W++
   Q: 576  HTDAVWGLAYSGikNRLLSCSADGTIRLWNP 606
           **********666689*************95 PP
   

   UBD/Beta-Prp
   S: 41   tgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.dlstgkcvhtlkghedsv..lslsfspsg.dklvsGshdrtirvwdlet 125
           +  l  +l  h+++v+ + +s  ++ l+++s D+ti++w ++++++c++t++g+++    +s++f   +  ++v+  +     ++dlet
   Q: 566  PNVLAGTLVAHTDAVWGLAYSGIKNRLLSCSADGTIRLWnPPEKSPCISTYNGEKEHGipTSIDFIGCDpAHIVASFNTGSTVLYDLET 654
           44557899*******************************8899*********87776413556666644277777667777778***** PP
   S: 126  gqclee......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
            q l          s+    +n vv+hp+  + ++++ +r ++++d ktgk ++ +   h d+v+sl++d+ng +l+sgs+d +++lw+
   Q: 655  SQPLIVlasqvdAASPSANQINRVVSHPTLPVTITAHENRHIKFFDNKTGKSIHSMVA-HLDAVTSLAVDPNGIYLMSGSHDCSIRLWN 742
           ****88999988888889999*******99**************************98.****************************** PP
   S: 209  lqtgecvrtlnght....dnvksvrfspnderlvsgssDgsir 247
           l++++cv++ ++h+    + +++v+f+p + +++++++D   +
   Q: 743  LESKTCVQEITAHRkkydESIYDVAFHPSKAYIACAGADALAK 785
           **************99999*******************97655 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MDEHPGGVGA AGGGGMAAPR QQGSNNNNNP QSGGVGQQEA GGVSSEVSRP QQYTIPGILH 60
YIQHEWARFE MERAHWEVER AELQARIAFL QGERKGQENL KKDLVRRIKM LEYALKQERA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050441|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCCTTTTGTA CCTTTTCTGT GTTGACAAAC TGTTCACTAA TAGGGTTACC AGACATCCCT 60
TATTTTAAGA GATGTCTCTC ATTTTTGGCA AAAAAAACTA TAATCATCCA GTGTCTCCCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050441|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08232--Striatin
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
KEGG lcm:102362345
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002046 Ailuropoda melanoleuca 88.84 0.00e+00 1252.00
IUUC-Apl-003472 Anas platyrhynchos 90.68 0.00e+00 1228.00
IUUC-Aca-005286 Anolis carolinensis 89.01 0.00e+00 1263.00
IUUC-Afl-008585 Aspergillus flavus 27.19 4.00e-35 143.00
IUUC-Afu-009096 Aspergillus fumigatus 24.10 5.00e-21 96.30
IUUC-Aor-009982 Aspergillus oryzae 26.96 4.00e-35 143.00
IUUC-Bta-012797 Bos taurus 89.66 0.00e+00 1274.00
IUUC-Cel-018443 Caenorhabditis elegans 39.16 5.00e-103 368.00
IUUC-Cja-018786 Callithrix jacchus 89.28 0.00e+00 1270.00
IUUC-Cfa-021098 Canis familiaris 87.38 0.00e+00 1225.00
IUUC-Cpo-022357 Cavia porcellus 87.42 0.00e+00 1228.00
IUUC-Csa-023725 Chlorocebus sabaeus 89.78 0.00e+00 1277.00
IUUC-Cho-024338 Choloepus hoffmanni 85.13 0.00e+00 1115.00
IUUC-Cin-025167 Ciona intestinalis 48.31 0.00e+00 654.00
IUUC-Csv-026143 Ciona savignyi 51.18 0.00e+00 669.00
IUUC-Cne-026783 Cryptococcus neoformans 33.61 5.00e-59 222.00
IUUC-Dno-029926 Dasypus novemcinctus 89.40 0.00e+00 1267.00
IUUC-Dse-031486 Dothistroma septosporum 27.71 4.00e-36 146.00
IUUC-Dme-032158 Drosophila melanogaster 61.96 9.00e-142 497.00
IUUC-Ete-032770 Echinops telfairi 77.02 0.00e+00 1069.00
IUUC-Eca-033309 Equus caballus 88.89 0.00e+00 1252.00
IUUC-Eeu-034939 Erinaceus europaeus 87.46 0.00e+00 920.00
IUUC-Fca-035719 Felis catus 86.54 0.00e+00 1138.00
IUUC-Fal-037408 Ficedula albicollis 90.16 0.00e+00 1169.00
IUUC-Fox-037678 Fusarium oxysporum 27.16 4.00e-35 143.00
IUUC-Fso-038364 Fusarium solani 26.88 2.00e-36 147.00
IUUC-Ggr-039846 Gaeumannomyces graminis 26.02 3.00e-34 140.00
IUUC-Gga-041218 Gallus gallus 91.41 0.00e+00 1310.00
IUUC-Gac-042142 Gasterosteus aculeatus 71.68 0.00e+00 1075.00
IUUC-Ggo-045607 Gorilla gorilla 87.50 0.00e+00 930.00
IUUC-Hsa-045717 Homo sapiens 89.52 0.00e+00 1274.00
IUUC-Itr-048177 Ictidomys tridecemlineatus 90.35 0.00e+00 890.00
IUUC-Loc-052193 Lepisosteus oculatus 87.45 0.00e+00 1289.00
IUUC-Lma-053183 Leptosphaeria maculans 29.06 3.00e-39 157.00
IUUC-Laf-053964 Loxodonta africana 89.80 0.00e+00 1249.00
IUUC-Mcc-055639 Macaca mulatta 89.80 0.00e+00 1278.00
IUUC-Mpo-057337 Magnaporthe poae 25.87 5.00e-30 126.00
IUUC-Mmr-061084 Microcebus murinus 89.66 0.00e+00 1275.00
IUUC-Mdo-063016 Monodelphis domestica 90.32 0.00e+00 1305.00
IUUC-Mmu-063914 Mus musculus 90.05 0.00e+00 1280.00
IUUC-Mpu-066348 Mustela putorius furo 90.86 0.00e+00 709.00
IUUC-Mlu-067303 Myotis lucifugus 87.13 0.00e+00 1211.00
IUUC-Nfi-068560 Neosartorya fischeri 26.02 4.00e-31 130.00
IUUC-Nle-070032 Nomascus leucogenys 89.52 0.00e+00 1275.00
IUUC-Opr-070496 Ochotona princeps 83.14 2.00e-173 602.00
IUUC-Oan-072822 Ornithorhynchus anatinus 89.28 0.00e+00 1159.00
IUUC-Ocu-073876 Oryctolagus cuniculus 87.47 0.00e+00 1241.00
IUUC-Ola-086321 Oryzias latipes 67.44 0.00e+00 1001.00
IUUC-Oga-088045 Otolemur garnettii 89.89 0.00e+00 1274.00
IUUC-Oar-089737 Ovis aries 88.70 0.00e+00 1180.00
IUUC-Ptr-090871 Pan troglodytes 89.24 0.00e+00 1195.00
IUUC-Pan-092139 Papio anubis 88.81 0.00e+00 1182.00
IUUC-Psi-093424 Pelodiscus sinensis 90.40 0.00e+00 1239.00
IUUC-Pma-094286 Petromyzon marinus 70.41 0.00e+00 691.00
IUUC-Pno-094905 Phaeosphaeria nodorum 28.95 9.00e-35 142.00
IUUC-Pfo-096564 Poecilia formosa 72.44 0.00e+00 1067.00
IUUC-Pab-098626 Pongo abelii 89.38 0.00e+00 1311.00
IUUC-Pva-102445 Pteropus vampyrus 84.30 0.00e+00 1150.00
IUUC-Pte-104374 Pyrenophora teres 29.10 2.00e-33 137.00
IUUC-Pyt-104568 Pyrenophora triticirepentis 28.57 8.00e-37 148.00
IUUC-Rno-105999 Rattus norvegicus 89.52 0.00e+00 1288.00
IUUC-Sha-106786 Sarcophilus harrisii 89.61 0.00e+00 1229.00
IUUC-Sar-113296 Sorex araneus 82.06 2.00e-139 489.00
IUUC-Tgu-117199 Taeniopygia guttata 87.01 0.00e+00 1151.00
IUUC-Tsy-119356 Tarsius syrichta 74.52 0.00e+00 879.00
IUUC-Tvi-122312 Trichoderma virens 26.25 5.00e-35 142.00
IUUC-Tme-126990 Tuber melanosporum 27.60 4.00e-37 149.00
IUUC-Tbe-127691 Tupaia belangeri 74.32 0.00e+00 718.00
IUUC-Ttr-128600 Tursiops truncatus 82.75 0.00e+00 1172.00
IUUC-Xtr-132330 Xenopus tropicalis 80.65 0.00e+00 1222.00
Created Date 25-Jun-2017

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