iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114461

Ensembl Protein ID

Sb04g022240.1

UniProt Accession

C5XU47; C5XU47_SORBI

Genbank Protein ID

EES05216.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G171200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g022240	Sb04g022240.1	Sb04g022240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-32	109.1	21	59
UBD/Beta-Prp	2.50e-52	178.7	18	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v +++f  d ++ +s++ D t+++W+++tg  +k
   Q: 21   GHEGAVLAVRFnRDgNYCLSCGKDRTLRLWNPHTGAHVK 59
           8***********888******************997665 PP

UBD/Beta-Prp

   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
            lsgh+g+v  v+++ dgn++ s+++Drt+rlW+  tg  ++t ++ h + v+ +  +s+   lvs++ d+++ +wd+ +g+++r+++gh++ v+s
   Q: 18   SLSGHEGAVLAVRFNRDGNYCLSCGKDRTLRLWNPHTGAHVKTYKS-HAREVRDVHSSSDNAKLVSCGADRQIFYWDVASGRVIRKFRGHNSEVNS 112
           6899****************************************99.************************************************* PP
   S: 228  vrfspnderlvsgssDgsiriWdlrs..gdllktlqlhnssvisvav 272
           v+f + +  +vs++ D+++r +d+rs  +d+++t+   ++sv+sv +
   Q: 113  VKFNEYNAVVVSAGYDRTVRAFDCRSqsSDPIQTIDTFQDSVMSVNL 159
           **********************9875226899999999999999976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTSSGTGAQQ LPRTEARSLS GHEGAVLAVR FNRDGNYCLS CGKDRTLRLW NPHTGAHVKT 60
YKSHAREVRD VHSSSDNAKL VSCGADRQIF YWDVASGRVI RKFRGHNSEV NSVKFNEYNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGGTCGTC GAACTCGTCG TCTTCCGTCC ATCCCATCCT CGGCGGCGGC GGCGGAGAGA 60
GAGCAAGAGA TGACGTCCTC GGGGACGGGC GCGCAGCAGC TGCCGCGGAC GGAGGCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_04g022240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	47.12	1.00e-84	305.00
IUUC-Atr-002647	Amborella trichopoda	76.37	6.00e-140	489.00
IUUC-Aca-004948	Anolis carolinensis	49.47	7.00e-85	306.00
IUUC-Aly-006489	Arabidopsis lyrata	71.04	3.00e-125	440.00
IUUC-Ath-007099	Arabidopsis thaliana	71.53	9.00e-125	438.00
IUUC-Acl-008374	Aspergillus clavatus	33.94	2.00e-49	188.00
IUUC-Afl-008506	Aspergillus flavus	35.31	5.00e-48	184.00
IUUC-Afu-009098	Aspergillus fumigatus	31.73	4.00e-43	167.00
IUUC-Ang-009705	Aspergillus niger	34.27	1.00e-45	176.00
IUUC-Aor-010031	Aspergillus oryzae	35.20	4.00e-48	184.00
IUUC-Ame-011056	Astyanax mexicanus	48.14	8.00e-84	302.00
IUUC-Bgr-012109	Blumeria graminis	34.88	3.00e-41	161.00
IUUC-Bta-012476	Bos taurus	48.81	5.00e-87	313.00
IUUC-Bci-013860	Botrytis cinerea	33.44	5.00e-40	157.00
IUUC-Bdi-014565	Brachypodium distachyon	89.80	3.00e-166	576.00
IUUC-Bol-016204	Brassica oleracea	72.35	1.00e-125	441.00
IUUC-Bra-018093	Brassica rapa	72.35	3.00e-125	440.00
IUUC-Cel-018500	Caenorhabditis elegans	43.86	8.00e-72	262.00
IUUC-Cja-019279	Callithrix jacchus	49.65	5.00e-84	303.00
IUUC-Cfa-020516	Canis familiaris	47.12	2.00e-84	305.00
IUUC-Cpo-021427	Cavia porcellus	47.12	6.00e-81	293.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	53.90	1.00e-91	328.00
IUUC-Csa-023449	Chlorocebus sabaeus	48.95	4.00e-84	303.00
IUUC-Cin-025637	Ciona intestinalis	43.22	2.00e-72	265.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	34.32	1.00e-46	179.00
IUUC-Cne-026994	Cryptococcus neoformans	35.53	1.00e-54	206.00
IUUC-Dre-028239	Danio rerio	47.90	2.00e-81	295.00
IUUC-Dno-029408	Dasypus novemcinctus	48.14	1.00e-85	308.00
IUUC-Dor-030684	Dipodomys ordii	45.36	1.00e-50	192.00
IUUC-Dse-031344	Dothistroma septosporum	36.94	3.00e-42	164.00
IUUC-Dme-031634	Drosophila melanogaster	41.70	8.00e-63	232.00
IUUC-Ete-033126	Echinops telfairi	44.07	2.00e-74	271.00
IUUC-Eca-034356	Equus caballus	42.03	5.00e-68	250.00
IUUC-Eeu-035196	Erinaceus europaeus	51.03	1.00e-40	159.00
IUUC-Fca-036231	Felis catus	48.14	4.00e-85	306.00
IUUC-Fox-038076	Fusarium oxysporum	34.02	7.00e-45	173.00
IUUC-Fso-038093	Fusarium solani	33.00	2.00e-36	145.00
IUUC-Gmo-039056	Gadus morhua	45.76	1.00e-77	282.00
IUUC-Ggr-039981	Gaeumannomyces graminis	31.69	4.00e-40	157.00
IUUC-Gga-041042	Gallus gallus	46.76	6.00e-84	303.00
IUUC-Gac-042638	Gasterosteus aculeatus	46.78	4.00e-80	290.00
IUUC-Gma-042689	Glycine max	75.59	3.00e-137	479.00
IUUC-Ggo-044720	Gorilla gorilla	49.65	1.00e-84	305.00
IUUC-Hsa-046056	Homo sapiens	50.00	4.00e-85	306.00
IUUC-Hvu-047675	Hordeum vulgare	80.55	3.00e-158	550.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	48.46	1.00e-85	308.00
IUUC-Lch-050634	Latimeria chalumnae	48.25	3.00e-76	277.00
IUUC-Lpe-051470	Leersia perrieri	88.85	4.00e-160	555.00
IUUC-Loc-052452	Lepisosteus oculatus	47.72	6.00e-79	286.00
IUUC-Lma-053235	Leptosphaeria maculans	37.93	2.00e-26	112.00
IUUC-Laf-054315	Loxodonta africana	48.95	2.00e-83	301.00
IUUC-Mcc-054923	Macaca mulatta	48.60	2.00e-83	301.00
IUUC-Mor-056936	Magnaporthe oryzae	33.90	6.00e-39	154.00
IUUC-Mtr-058595	Medicago truncatula	73.38	7.00e-135	472.00
IUUC-Mla-058902	Melampsora laricipopulina	37.94	1.00e-62	232.00
IUUC-Mvi-060471	Microbotryum violaceum	39.39	4.00e-66	243.00
IUUC-Mmr-061665	Microcebus murinus	48.14	2.00e-85	307.00
IUUC-Mdo-062750	Monodelphis domestica	50.39	6.00e-72	263.00
IUUC-Mmu-063750	Mus musculus	49.15	8.00e-87	312.00
IUUC-Mac-065441	Musa acuminata	78.15	2.00e-145	507.00
IUUC-Mpu-066863	Mustela putorius furo	46.78	3.00e-84	304.00
IUUC-Mlu-067645	Myotis lucifugus	49.32	1.00e-85	308.00
IUUC-Nfi-068549	Neosartorya fischeri	34.17	1.00e-45	176.00
IUUC-Ncr-068816	Neurospora crassa	31.89	1.00e-31	130.00
IUUC-Nle-069457	Nomascus leucogenys	49.65	2.00e-84	305.00
IUUC-Ont-071674	Oreochromis niloticus	46.15	1.00e-70	259.00
IUUC-Oan-073391	Ornithorhynchus anatinus	48.46	7.00e-86	309.00
IUUC-Ocu-074186	Oryctolagus cuniculus	49.49	2.00e-83	301.00
IUUC-Oba-075414	Oryza barthii	88.58	9.00e-156	541.00
IUUC-Obr-076739	Oryza brachyantha	89.70	3.00e-164	569.00
IUUC-Ogl-076962	Oryza glaberrima	90.82	6.00e-163	565.00
IUUC-Ogu-078831	Oryza glumaepatula	91.16	5.00e-163	565.00
IUUC-Oin-079985	Oryza indica	90.82	6.00e-163	565.00
IUUC-Ome-081333	Oryza meridionalis	90.41	5.00e-148	515.00
IUUC-Oni-082558	Oryza nivara	90.82	6.00e-163	565.00
IUUC-Opu-084091	Oryza punctata	90.57	2.00e-163	567.00
IUUC-Oru-085253	Oryza rufipogon	88.89	3.00e-151	526.00
IUUC-Osa-086077	Oryza sativa	90.82	6.00e-163	565.00
IUUC-Ola-086946	Oryzias latipes	46.62	3.00e-81	293.00
IUUC-Olu-087604	Ostreococcus lucimarinus	42.77	8.00e-66	242.00
IUUC-Oga-088681	Otolemur garnettii	47.80	7.00e-84	302.00
IUUC-Oar-089913	Ovis aries	49.15	2.00e-86	311.00
IUUC-Ptr-091343	Pan troglodytes	49.65	6.00e-85	306.00
IUUC-Pan-092078	Papio anubis	48.95	4.00e-84	303.00
IUUC-Psi-093190	Pelodiscus sinensis	47.44	2.00e-82	298.00
IUUC-Pno-095078	Phaeosphaeria nodorum	32.17	9.00e-45	172.00
IUUC-Ppa-095777	Physcomitrella patens	71.53	6.00e-130	455.00
IUUC-Pfo-097153	Poecilia formosa	46.85	1.00e-80	292.00
IUUC-Pab-098307	Pongo abelii	49.64	2.00e-83	301.00
IUUC-Pop-099315	Populus trichocarpa	76.79	3.00e-135	473.00
IUUC-Pca-100538	Procavia capensis	49.44	1.00e-78	285.00
IUUC-Ppe-101632	Prunus persica	74.66	2.00e-137	480.00
IUUC-Pva-102484	Pteropus vampyrus	49.15	4.00e-86	310.00
IUUC-Pgr-103495	Puccinia graminis	38.52	1.00e-62	231.00
IUUC-Ptt-103975	Puccinia triticina	37.46	6.00e-62	229.00
IUUC-Pte-104354	Pyrenophora teres	32.52	3.00e-35	141.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	32.03	2.00e-34	139.00
IUUC-Rno-105655	Rattus norvegicus	49.83	2.00e-87	315.00
IUUC-Sha-107130	Sarcophilus harrisii	48.03	1.00e-59	221.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	37.18	9.00e-55	206.00
IUUC-Spo-108131	Schizosaccharomyces pombe	34.13	3.00e-49	187.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	32.99	8.00e-39	153.00
IUUC-Smo-108996	Selaginella moellendorffii	66.22	4.00e-114	403.00
IUUC-Sit-110508	Setaria italica	96.37	3.00e-176	609.00
IUUC-Sly-111093	Solanum lycopersicum	73.22	8.00e-127	445.00
IUUC-Stu-112380	Solanum tuberosum	72.88	1.00e-126	444.00
IUUC-Sar-113127	Sorex araneus	46.67	9.00e-35	139.00
IUUC-Sre-115020	Sporisorium reilianum	35.74	7.00e-36	144.00
IUUC-Ssc-115632	Sus scrofa	48.81	3.00e-86	310.00
IUUC-Tru-118039	Takifugu rubripes	46.08	4.00e-74	270.00
IUUC-Tsy-119239	Tarsius syrichta	49.38	1.00e-45	175.00
IUUC-Tni-120097	Tetraodon nigroviridis	45.45	8.00e-72	262.00
IUUC-Tca-121695	Theobroma cacao	74.66	1.00e-136	478.00
IUUC-Tre-122182	Trichoderma reesei	34.21	1.00e-41	162.00
IUUC-Tvi-122429	Trichoderma virens	35.37	5.00e-44	170.00
IUUC-Tae-125136	Triticum aestivum	88.26	1.00e-163	567.00
IUUC-Tur-126216	Triticum urartu	87.54	2.00e-161	560.00
IUUC-Tme-127030	Tuber melanosporum	41.85	3.00e-63	234.00
IUUC-Tbe-127686	Tupaia belangeri	48.00	5.00e-48	183.00
IUUC-Ttr-128770	Tursiops truncatus	49.15	8.00e-86	309.00
IUUC-Uma-129446	Ustilago maydis	32.36	5.00e-39	155.00
IUUC-Vda-129680	Verticillium dahliae	33.61	3.00e-32	130.00
IUUC-Vvi-131292	Vitis vinifera	76.01	6.00e-140	489.00
IUUC-Xtr-132204	Xenopus tropicalis	48.47	2.00e-88	318.00
IUUC-Xma-133727	Xiphophorus maculatus	46.15	7.00e-79	286.00
IUUC-Zma-135908	Zea mays	98.35	7.00e-168	581.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence