iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130995

UUCD1 version

UUC-ViV-00829

Ensembl Protein ID

VIT_14s0030g01350.t01

UniProt Accession

F6HTW0; F6HTW0_VITVI

Genbank Protein ID

CCB58121.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596249

Gene Name

LRS1; VIT_14s0030g01350

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_14s0030g01350	VIT_14s0030g01350.t01	VIT_14s0030g01350.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-34	114.5	223	260
UBD/Beta-Prp	7.10e-47	160.6	219	389

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++sv++la  ++ tllvsG+  +++++WD+rtg ++
   Q: 223  GHKESVYALAMnDSgTLLVSGGTEKVVRIWDPRTGSKT 260
           8**********7336*******************9875 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           ++ kgh++sv++l+++ sg  lvsG+  +++r+wd +tg++    l+gh++ ++ + ++++g+ + sGs D+++rlWdl ++++++  
   Q: 219  VAAKGHKESVYALAMNDSGTLLVSGGTEKVVRIWDPRTGSKTM-KLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSY 305
           5679**************************************9.9******************************************* PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
              htdsv  l+ +++  ++ sg++d ++ l dl t e +  ++  + ++++++++  d+ +  ++ D s+r W  + +++ k++q+ 
   Q: 306  AV-HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESILLCT-KEHPILQLALH--DDGIWAATTDSSVRRWPAEGRNPQKVFQRG 389
           98.*******************************9998555444.56789999999..5555555569******99999999999975 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MELRVSAMHR VGSAGNTSNS TRPRKEKRLT YVLNDADDTK HCAGINCLAV WKPLAPDGRD 60
YLFTGSRDGT LKRWELTEEV ATCSATFESH IDWVNDAVLA GDNTLVSCSS DTTLKTWNCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGGACAAT ATCAGAGTAA CCCAGGTAAG AACCACTGTA AAGCTGCAAA GAAAGTGATG 60
AGATATCTTC AAGGAACCAA AGATTACAAG CTTATGTACA GATGGACAAG CAATTTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001160	Aegilops tauschii	76.64	0.00e+00	810.00
IUUC-Aml-001533	Ailuropoda melanoleuca	35.01	3.00e-79	288.00
IUUC-Atr-003009	Amborella trichopoda	79.66	0.00e+00	1248.00
IUUC-Apl-003709	Anas platyrhynchos	53.99	9.00e-49	186.00
IUUC-Aca-004875	Anolis carolinensis	35.55	2.00e-81	296.00
IUUC-Aly-005464	Arabidopsis lyrata	72.62	0.00e+00	1081.00
IUUC-Ath-006969	Arabidopsis thaliana	73.38	0.00e+00	1069.00
IUUC-Acl-008203	Aspergillus clavatus	29.77	2.00e-55	210.00
IUUC-Afl-008571	Aspergillus flavus	30.35	1.00e-58	221.00
IUUC-Afu-009072	Aspergillus fumigatus	28.68	4.00e-52	199.00
IUUC-Ani-009413	Aspergillus nidulans	30.49	7.00e-56	211.00
IUUC-Ang-009571	Aspergillus niger	29.84	5.00e-58	218.00
IUUC-Aor-010064	Aspergillus oryzae	30.35	5.00e-59	222.00
IUUC-Ate-010463	Aspergillus terreus	29.60	3.00e-57	216.00
IUUC-Ame-010875	Astyanax mexicanus	34.35	2.00e-78	285.00
IUUC-Bgr-012288	Blumeria graminis	30.65	2.00e-61	230.00
IUUC-Bta-013379	Bos taurus	35.19	4.00e-80	291.00
IUUC-Bci-013859	Botrytis cinerea	29.27	1.00e-64	241.00
IUUC-Bdi-014645	Brachypodium distachyon	73.54	0.00e+00	1110.00
IUUC-Bol-015551	Brassica oleracea	72.72	0.00e+00	1067.00
IUUC-Bra-017253	Brassica rapa	72.98	0.00e+00	1048.00
IUUC-Cel-018656	Caenorhabditis elegans	27.94	1.00e-74	273.00
IUUC-Cja-018804	Callithrix jacchus	35.07	2.00e-79	289.00
IUUC-Cfa-020076	Canis familiaris	35.19	3.00e-80	292.00
IUUC-Cpo-021721	Cavia porcellus	35.55	1.00e-79	290.00
IUUC-Cre-022779	Chlamydomonas reinhardtii	32.41	5.00e-65	242.00
IUUC-Csa-023188	Chlorocebus sabaeus	35.19	3.00e-80	292.00
IUUC-Cho-024932	Choloepus hoffmanni	30.30	6.00e-79	287.00
IUUC-Cin-025591	Ciona intestinalis	30.31	1.00e-86	313.00
IUUC-Cgl-026540	Colletotrichum gloeosporioides	32.16	7.00e-21	95.50
IUUC-Cne-026819	Cryptococcus neoformans	30.51	1.00e-30	128.00
IUUC-Cme-027188	Cyanidioschyzon merolae	31.61	9.00e-69	253.00
IUUC-Dre-028370	Danio rerio	32.55	2.00e-98	352.00
IUUC-Dno-029960	Dasypus novemcinctus	33.08	4.00e-96	344.00
IUUC-Dor-030933	Dipodomys ordii	43.77	4.00e-67	247.00
IUUC-Dse-031532	Dothistroma septosporum	33.07	2.00e-40	160.00
IUUC-Dme-032168	Drosophila melanogaster	29.91	5.00e-74	271.00
IUUC-Ete-033107	Echinops telfairi	32.01	1.00e-87	316.00
IUUC-Eca-034028	Equus caballus	35.37	3.00e-80	291.00
IUUC-Eeu-034894	Erinaceus europaeus	37.12	3.00e-78	285.00
IUUC-Fca-035619	Felis catus	44.44	3.00e-69	255.00
IUUC-Fal-036869	Ficedula albicollis	35.37	3.00e-81	295.00
IUUC-Fox-037907	Fusarium oxysporum	31.36	1.00e-42	167.00
IUUC-Fso-038101	Fusarium solani	31.89	1.00e-41	164.00
IUUC-Gmo-038627	Gadus morhua	34.23	2.00e-81	295.00
IUUC-Ggr-039995	Gaeumannomyces graminis	30.40	5.00e-38	152.00
IUUC-Gga-040555	Gallus gallus	35.73	7.00e-82	297.00
IUUC-Gac-042497	Gasterosteus aculeatus	33.94	3.00e-80	292.00
IUUC-Gma-043327	Glycine max	82.32	0.00e+00	1305.00
IUUC-Ggo-045561	Gorilla gorilla	35.19	3.00e-80	292.00
IUUC-Hsa-045710	Homo sapiens	35.19	3.00e-80	292.00
IUUC-Hvu-047730	Hordeum vulgare	74.95	0.00e+00	799.00
IUUC-Itr-049030	Ictidomys tridecemlineatus	33.14	3.00e-64	238.00
IUUC-Kpa-049237	Komagataella pastoris	29.60	2.00e-24	107.00
IUUC-Lch-049507	Latimeria chalumnae	35.24	7.00e-79	287.00
IUUC-Lpe-051608	Leersia perrieri	71.83	0.00e+00	1076.00
IUUC-Loc-052373	Lepisosteus oculatus	32.52	2.00e-94	339.00
IUUC-Lma-053025	Leptosphaeria maculans	32.46	1.00e-41	164.00
IUUC-Laf-053706	Loxodonta africana	35.19	4.00e-80	291.00
IUUC-Mcc-055046	Macaca mulatta	35.19	3.00e-80	292.00
IUUC-Meu-056840	Macropus eugenii	34.22	5.00e-28	118.00
IUUC-Mor-057284	Magnaporthe oryzae	27.50	2.00e-54	206.00
IUUC-Mpo-057418	Magnaporthe poae	30.48	8.00e-37	148.00
IUUC-Mtr-058384	Medicago truncatula	80.21	0.00e+00	1194.00
IUUC-Mla-059101	Melampsora laricipopulina	33.86	5.00e-39	156.00
IUUC-Mga-059297	Meleagris gallopavo	35.73	7.00e-82	297.00
IUUC-Mvi-060419	Microbotryum violaceum	34.83	9.00e-38	152.00
IUUC-Mmr-061196	Microcebus murinus	35.19	3.00e-79	288.00
IUUC-Mdo-062762	Monodelphis domestica	35.64	7.00e-82	297.00
IUUC-Mmu-063915	Mus musculus	35.73	1.00e-80	293.00
IUUC-Mac-065217	Musa acuminata	77.25	0.00e+00	1151.00
IUUC-Mpu-065999	Mustela putorius furo	45.13	4.00e-65	241.00
IUUC-Mlu-068226	Myotis lucifugus	35.19	6.00e-80	291.00
IUUC-Nfi-068416	Neosartorya fischeri	29.07	3.00e-56	213.00
IUUC-Ncr-068825	Neurospora crassa	28.71	2.00e-59	223.00
IUUC-Nle-069416	Nomascus leucogenys	35.19	3.00e-80	292.00
IUUC-Opr-070515	Ochotona princeps	33.21	3.00e-69	255.00
IUUC-Ont-072052	Oreochromis niloticus	31.13	2.00e-92	332.00
IUUC-Oan-073636	Ornithorhynchus anatinus	35.79	4.00e-83	301.00
IUUC-Ocu-074799	Oryctolagus cuniculus	35.19	3.00e-80	292.00
IUUC-Oba-075146	Oryza barthii	71.56	0.00e+00	1076.00
IUUC-Obr-076699	Oryza brachyantha	72.52	0.00e+00	1092.00
IUUC-Ogl-077883	Oryza glaberrima	73.25	0.00e+00	709.00
IUUC-Ogu-078114	Oryza glumaepatula	65.74	0.00e+00	955.00
IUUC-Oin-079575	Oryza indica	72.35	0.00e+00	1099.00
IUUC-Olo-080531	Oryza longistaminata	67.70	0.00e+00	1020.00
IUUC-Ome-081368	Oryza meridionalis	67.24	0.00e+00	989.00
IUUC-Oni-082457	Oryza nivara	71.47	0.00e+00	1078.00
IUUC-Opu-084050	Oryza punctata	71.20	0.00e+00	1066.00
IUUC-Oru-084330	Oryza rufipogon	71.56	0.00e+00	1076.00
IUUC-Osa-085408	Oryza sativa	72.35	0.00e+00	1099.00
IUUC-Ola-087546	Oryzias latipes	33.87	3.00e-80	291.00
IUUC-Olu-087710	Ostreococcus lucimarinus	32.56	3.00e-90	325.00
IUUC-Oga-087998	Otolemur garnettii	35.19	3.00e-80	292.00
IUUC-Oar-090303	Ovis aries	35.19	4.00e-80	291.00
IUUC-Ptr-090588	Pan troglodytes	35.19	3.00e-80	292.00
IUUC-Pan-092722	Papio anubis	35.19	3.00e-80	292.00
IUUC-Psi-093911	Pelodiscus sinensis	35.73	6.00e-82	297.00
IUUC-Pma-094580	Petromyzon marinus	35.68	3.00e-83	301.00
IUUC-Pno-095085	Phaeosphaeria nodorum	34.01	3.00e-42	166.00
IUUC-Ppa-095594	Physcomitrella patens	62.26	0.00e+00	928.00
IUUC-Pfo-096994	Poecilia formosa	32.01	6.00e-96	344.00
IUUC-Pab-097586	Pongo abelii	35.19	4.00e-80	291.00
IUUC-Pop-099389	Populus trichocarpa	87.02	0.00e+00	1320.00
IUUC-Pca-100458	Procavia capensis	36.76	9.00e-33	134.00
IUUC-Ppe-102060	Prunus persica	89.27	0.00e+00	1345.00
IUUC-Pva-102698	Pteropus vampyrus	33.87	7.00e-81	294.00
IUUC-Pgr-103649	Puccinia graminis	29.18	4.00e-33	136.00
IUUC-Ptt-103910	Puccinia triticina	32.08	4.00e-38	152.00
IUUC-Pte-104181	Pyrenophora teres	32.07	3.00e-40	160.00
IUUC-Pyt-104439	Pyrenophora triticirepentis	32.07	3.00e-40	160.00
IUUC-Rno-104978	Rattus norvegicus	35.65	6.00e-80	291.00
IUUC-Sha-107079	Sarcophilus harrisii	37.24	4.00e-75	275.00
IUUC-Sja-107716	Schizosaccharomyces japonicus	30.46	1.00e-65	244.00
IUUC-Spo-108325	Schizosaccharomyces pombe	28.65	4.00e-51	195.00
IUUC-Ssl-108542	Sclerotinia sclerotiorum	31.55	4.00e-43	169.00
IUUC-Smo-109427	Selaginella moellendorffii	62.06	0.00e+00	942.00
IUUC-Sit-110755	Setaria italica	73.15	0.00e+00	1072.00
IUUC-Sly-111099	Solanum lycopersicum	82.86	0.00e+00	1197.00
IUUC-Sar-113408	Sorex araneus	45.23	3.00e-57	215.00
IUUC-Sbi-113789	Sorghum bicolor	72.18	0.00e+00	1072.00
IUUC-Sre-114998	Sporisorium reilianum	33.43	9.00e-43	168.00
IUUC-Ssc-115434	Sus scrofa	35.19	3.00e-80	292.00
IUUC-Tgu-116517	Taeniopygia guttata	35.55	2.00e-81	296.00
IUUC-Tru-118174	Takifugu rubripes	33.94	2.00e-81	295.00
IUUC-Tsy-118935	Tarsius syrichta	35.37	1.00e-82	300.00
IUUC-Tni-119744	Tetraodon nigroviridis	33.57	9.00e-79	287.00
IUUC-Tca-121360	Theobroma cacao	88.21	0.00e+00	1352.00
IUUC-Tre-122198	Trichoderma reesei	31.95	3.00e-41	162.00
IUUC-Tvi-122389	Trichoderma virens	31.77	2.00e-42	167.00
IUUC-Tae-123915	Triticum aestivum	72.49	0.00e+00	1106.00
IUUC-Tur-126699	Triticum urartu	71.30	0.00e+00	1093.00
IUUC-Tme-126932	Tuber melanosporum	28.96	1.00e-59	224.00
IUUC-Tbe-127267	Tupaia belangeri	39.92	1.00e-44	173.00
IUUC-Ttr-129153	Tursiops truncatus	35.73	1.00e-82	300.00
IUUC-Uma-129604	Ustilago maydis	32.11	5.00e-39	156.00
IUUC-Vda-129925	Verticillium dahliae	33.07	3.00e-45	176.00
IUUC-Vpa-130553	Vicugna pacos	36.43	3.00e-83	301.00
IUUC-Xtr-132346	Xenopus tropicalis	33.16	3.00e-98	351.00
IUUC-Xma-133654	Xiphophorus maculatus	39.27	6.00e-62	229.00
IUUC-Yli-134451	Yarrowia lipolytica	23.88	9.00e-22	98.20
IUUC-Zma-135647	Zea mays	72.62	0.00e+00	1075.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence