iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022050

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02055764

Gene Name

TRIM23

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000019526.1	ENSCPOT00000027663.1	ENSCPOP00000018623.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	97.04	0.00e+00	1150.00	IUUC-Hsa-045801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MATLVVNKPG AGLDSGRQGT RGTAVVKVLE CGVCEDVFSL QGDKIPRLLL CGHTVCHDCL 60
TRLPLHGRAI RCPFDRQVTD LGDSGVWGLK KNFALLELLE RLQNGHIGQY GAAEEAIGVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACTC TGGTTGTAAA CAAGCCTGGA GCGGGGCTAG ACAGTGGGCG ACAGGGCACC 60
CGGGGAACGG CTGTGGTGAA GGTGAGGGAT CTTGCGTGCT CCGTTCTCCA TCGTCAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0342--GTP-binding
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR024156--Small_GTPase_ARF
IPR006689--Small_GTPase_ARF/SAR
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51417--ARF
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00025--Arf
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR00328--SAR1GTPBP

SMART

SM00502--BBC
SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0000139--C:Golgi membrane
GO:0005765--C:lysosomal membrane
GO:0005634--C:nucleus
GO:0019003--F:GDP binding
GO:0005525--F:GTP binding
GO:0003924--F:GTPase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001685	Ailuropoda melanoleuca	97.92	0.00e+00	1129.00
IUUC-Apl-003280	Anas platyrhynchos	94.40	0.00e+00	1085.00
IUUC-Aca-004587	Anolis carolinensis	91.35	0.00e+00	1001.00
IUUC-Ame-010760	Astyanax mexicanus	88.31	0.00e+00	1045.00
IUUC-Bta-013139	Bos taurus	95.34	0.00e+00	1100.00
IUUC-Cel-018197	Caenorhabditis elegans	36.16	3.00e-95	342.00
IUUC-Cja-019407	Callithrix jacchus	96.69	0.00e+00	1118.00
IUUC-Cfa-020758	Canis familiaris	97.54	0.00e+00	1113.00
IUUC-Csa-023938	Chlorocebus sabaeus	97.04	0.00e+00	1120.00
IUUC-Cho-024793	Choloepus hoffmanni	77.03	0.00e+00	747.00
IUUC-Cin-025424	Ciona intestinalis	56.61	0.00e+00	633.00
IUUC-Csv-025949	Ciona savignyi	55.56	6.00e-180	624.00
IUUC-Dre-028835	Danio rerio	87.50	0.00e+00	1041.00
IUUC-Dno-029080	Dasypus novemcinctus	88.83	0.00e+00	1022.00
IUUC-Dor-031092	Dipodomys ordii	90.24	0.00e+00	1053.00
IUUC-Ete-033169	Echinops telfairi	83.62	0.00e+00	939.00
IUUC-Eca-033509	Equus caballus	98.08	0.00e+00	1130.00
IUUC-Eeu-034669	Erinaceus europaeus	98.23	6.00e-131	461.00
IUUC-Fca-035813	Felis catus	97.91	0.00e+00	1130.00
IUUC-Fal-037222	Ficedula albicollis	95.63	0.00e+00	1093.00
IUUC-Gmo-038996	Gadus morhua	88.00	0.00e+00	1042.00
IUUC-Gga-040181	Gallus gallus	93.08	0.00e+00	1106.00
IUUC-Gac-041763	Gasterosteus aculeatus	87.13	0.00e+00	1031.00
IUUC-Ggo-044808	Gorilla gorilla	91.32	0.00e+00	1055.00
IUUC-Hsa-045801	Homo sapiens	97.04	0.00e+00	1120.00
IUUC-Itr-048568	Ictidomys tridecemlineatus	97.91	0.00e+00	1129.00
IUUC-Lch-049531	Latimeria chalumnae	91.86	0.00e+00	1058.00
IUUC-Loc-052929	Lepisosteus oculatus	88.43	0.00e+00	1049.00
IUUC-Laf-053593	Loxodonta africana	97.74	0.00e+00	1127.00
IUUC-Mcc-055065	Macaca mulatta	97.04	0.00e+00	1120.00
IUUC-Meu-056372	Macropus eugenii	98.67	5.00e-131	461.00
IUUC-Mga-059665	Meleagris gallopavo	94.56	0.00e+00	952.00
IUUC-Mmr-061643	Microcebus murinus	97.91	0.00e+00	1128.00
IUUC-Mdo-062624	Monodelphis domestica	93.50	0.00e+00	1107.00
IUUC-Mmu-064210	Mus musculus	97.74	0.00e+00	1157.00
IUUC-Mpu-066292	Mustela putorius furo	97.83	0.00e+00	1086.00
IUUC-Mlu-066952	Myotis lucifugus	97.91	0.00e+00	1127.00
IUUC-Nle-069002	Nomascus leucogenys	97.04	0.00e+00	1120.00
IUUC-Opr-070405	Ochotona princeps	87.63	0.00e+00	1023.00
IUUC-Ont-071487	Oreochromis niloticus	88.35	0.00e+00	1044.00
IUUC-Oan-073274	Ornithorhynchus anatinus	95.34	0.00e+00	978.00
IUUC-Ocu-074788	Oryctolagus cuniculus	97.39	0.00e+00	1123.00
IUUC-Ola-086339	Oryzias latipes	87.11	0.00e+00	1031.00
IUUC-Oga-089037	Otolemur garnettii	97.91	0.00e+00	1128.00
IUUC-Oar-089458	Ovis aries	97.50	0.00e+00	1100.00
IUUC-Pan-092120	Papio anubis	96.37	0.00e+00	1105.00
IUUC-Psi-093157	Pelodiscus sinensis	91.88	0.00e+00	1095.00
IUUC-Pfo-096904	Poecilia formosa	87.65	0.00e+00	1035.00
IUUC-Pab-098358	Pongo abelii	97.04	0.00e+00	1120.00
IUUC-Pva-102674	Pteropus vampyrus	95.99	0.00e+00	1104.00
IUUC-Rno-105352	Rattus norvegicus	97.56	0.00e+00	1157.00
IUUC-Sha-106532	Sarcophilus harrisii	86.07	2.00e-61	227.00
IUUC-Sar-113483	Sorex araneus	95.29	2.00e-150	525.00
IUUC-Ssc-116170	Sus scrofa	97.56	0.00e+00	1126.00
IUUC-Tgu-116968	Taeniopygia guttata	92.35	0.00e+00	1084.00
IUUC-Tru-118246	Takifugu rubripes	88.91	0.00e+00	1032.00
IUUC-Tni-120692	Tetraodon nigroviridis	89.44	0.00e+00	1028.00
IUUC-Ttr-128956	Tursiops truncatus	98.08	0.00e+00	1130.00
IUUC-Vpa-130291	Vicugna pacos	90.94	0.00e+00	1063.00
IUUC-Xtr-132331	Xenopus tropicalis	91.28	0.00e+00	912.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence