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Tag Content
iUUCD ID IUUC-Cpo-022237
Ensembl Protein ID ENSCPOP00000000003.2
UniProt Accession H0USZ0; H0USZ0_CAVPO
Genbank Protein ID ENSCPOP00000000003
Protein Name Presenilin
Genbank Nucleotide ID AAKN02025304
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000000004.3 ENSCPOT00000000004.2 ENSCPOP00000000003.2
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 1.10e-08 34.9 244 283
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnnLLe 41
    +eta+e+++++FP+l+ys+++v+L++++ +++a+ + +
   Q: 244 VETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSK 283
    89***************************99999987765 PP
   

Organism Cavia porcellus
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
QNDSRDRQEQ GDRRRPGNPQ PVSNGRPQGN SRQVVEQDEE EDEELTLKYG AKHVIMLFVP 60
VTLCMVVVVA TIKSVSFYTR KDGQLIYTPF TEDTETVGQR ALHSVLNAAI MISVIVVMTI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cpo-022237|UBD,CUE|Cavia porcellus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGAATGACA GTCGGGACCG GCAGGAGCAG GGTGATAGAC GGAGACCGGG CAACCCCCAG 60
CCAGTATCTA ATGGCCGGCC CCAGGGGAAC TCTCGGCAGG TGGTGGAACA AGATGAGGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cpo-022237|UBD,CUE|Cavia porcellus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 36.07 3.00e-25 110.00
IUUC-Aml-001648 Ailuropoda melanoleuca 91.51 3.00e-161 560.00
IUUC-Atr-003039 Amborella trichopoda 33.11 8.00e-40 157.00
IUUC-Apl-003727 Anas platyrhynchos 86.97 3.00e-175 608.00
IUUC-Aca-004582 Anolis carolinensis 85.78 5.00e-180 623.00
IUUC-Aly-005455 Arabidopsis lyrata 32.56 1.00e-18 87.40
IUUC-Ath-006730 Arabidopsis thaliana 33.95 3.00e-19 89.40
IUUC-Ame-011500 Astyanax mexicanus 74.50 3.00e-148 518.00
IUUC-Bta-013026 Bos taurus 89.30 0.00e+00 640.00
IUUC-Bdi-014196 Brachypodium distachyon 33.24 2.00e-29 123.00
IUUC-Bol-015841 Brassica oleracea 36.91 7.00e-33 134.00
IUUC-Bra-017580 Brassica rapa 52.29 7.00e-18 85.10
IUUC-Cel-018553 Caenorhabditis elegans 51.82 9.00e-94 337.00
IUUC-Cja-019994 Callithrix jacchus 96.22 0.00e+00 687.00
IUUC-Cfa-020074 Canis familiaris 94.33 0.00e+00 679.00
IUUC-Csa-023537 Chlorocebus sabaeus 95.44 0.00e+00 719.00
IUUC-Cho-024735 Choloepus hoffmanni 82.27 9.00e-177 612.00
IUUC-Cin-025780 Ciona intestinalis 63.41 2.00e-125 442.00
IUUC-Csv-025967 Ciona savignyi 62.96 1.00e-118 419.00
IUUC-Dre-028689 Danio rerio 78.80 3.00e-145 508.00
IUUC-Dno-029758 Dasypus novemcinctus 93.84 0.00e+00 671.00
IUUC-Dor-030609 Dipodomys ordii 72.89 2.00e-159 555.00
IUUC-Dme-031929 Drosophila melanogaster 56.04 1.00e-110 393.00
IUUC-Ete-032487 Echinops telfairi 83.81 2.00e-84 306.00
IUUC-Eca-033391 Equus caballus 74.47 7.00e-132 463.00
IUUC-Eeu-035134 Erinaceus europaeus 91.21 7.00e-143 499.00
IUUC-Fca-036243 Felis catus 94.56 0.00e+00 671.00
IUUC-Fal-036600 Ficedula albicollis 88.25 1.00e-176 612.00
IUUC-Gmo-038550 Gadus morhua 65.40 4.00e-113 401.00
IUUC-Gga-040993 Gallus gallus 87.89 5.00e-179 620.00
IUUC-Gac-042342 Gasterosteus aculeatus 71.43 2.00e-128 452.00
IUUC-Gma-043822 Glycine max 39.47 2.00e-24 106.00
IUUC-Ggo-044859 Gorilla gorilla 94.24 9.00e-168 582.00
IUUC-Hsa-046822 Homo sapiens 95.44 0.00e+00 719.00
IUUC-Hvu-047141 Hordeum vulgare 35.95 3.00e-26 112.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 95.96 5.00e-159 553.00
IUUC-Lch-049946 Latimeria chalumnae 72.12 3.00e-138 484.00
IUUC-Lpe-051132 Leersia perrieri 33.83 4.00e-30 125.00
IUUC-Laf-053979 Loxodonta africana 90.09 2.00e-179 621.00
IUUC-Mcc-055682 Macaca mulatta 95.44 0.00e+00 719.00
IUUC-Meu-056004 Macropus eugenii 74.94 3.00e-152 531.00
IUUC-Mtr-058392 Medicago truncatula 34.75 3.00e-32 132.00
IUUC-Mga-059466 Meleagris gallopavo 87.89 8.00e-179 619.00
IUUC-Mmr-061538 Microcebus murinus 76.31 3.00e-148 518.00
IUUC-Mdo-062122 Monodelphis domestica 89.13 0.00e+00 636.00
IUUC-Mmu-063176 Mus musculus 93.17 0.00e+00 682.00
IUUC-Mpu-065927 Mustela putorius furo 94.56 0.00e+00 681.00
IUUC-Mlu-067079 Myotis lucifugus 92.91 0.00e+00 694.00
IUUC-Nle-070180 Nomascus leucogenys 95.44 0.00e+00 719.00
IUUC-Opr-070847 Ochotona princeps 86.82 0.00e+00 628.00
IUUC-Ont-071846 Oreochromis niloticus 75.74 2.00e-144 505.00
IUUC-Oan-072783 Ornithorhynchus anatinus 82.82 2.00e-133 468.00
IUUC-Ocu-074527 Oryctolagus cuniculus 94.31 0.00e+00 710.00
IUUC-Oba-075256 Oryza barthii 33.13 2.00e-28 119.00
IUUC-Ogl-077097 Oryza glaberrima 32.24 4.00e-29 122.00
IUUC-Ogu-078570 Oryza glumaepatula 32.66 5.00e-29 122.00
IUUC-Oin-079244 Oryza indica 32.24 3.00e-29 123.00
IUUC-Olo-080484 Oryza longistaminata 35.07 3.00e-24 105.00
IUUC-Ome-081814 Oryza meridionalis 32.51 4.00e-30 125.00
IUUC-Oni-082057 Oryza nivara 32.66 3.00e-29 122.00
IUUC-Opu-084176 Oryza punctata 33.00 4.00e-29 122.00
IUUC-Oru-084618 Oryza rufipogon 32.66 6.00e-29 121.00
IUUC-Osa-085602 Oryza sativa 32.66 9.00e-29 120.00
IUUC-Olu-087811 Ostreococcus lucimarinus 35.20 1.00e-47 183.00
IUUC-Oar-090348 Ovis aries 90.00 0.00e+00 684.00
IUUC-Ptr-091060 Pan troglodytes 95.44 0.00e+00 719.00
IUUC-Pan-091855 Papio anubis 85.88 4.00e-177 614.00
IUUC-Psi-093505 Pelodiscus sinensis 86.46 2.00e-177 615.00
IUUC-Pfo-097396 Poecilia formosa 73.71 6.00e-149 520.00
IUUC-Pab-098591 Pongo abelii 95.21 0.00e+00 714.00
IUUC-Pop-099661 Populus trichocarpa 33.67 2.00e-33 136.00
IUUC-Pca-101029 Procavia capensis 88.89 9.00e-180 622.00
IUUC-Ppe-101495 Prunus persica 32.06 2.00e-38 153.00
IUUC-Pva-102244 Pteropus vampyrus 87.00 1.00e-180 625.00
IUUC-Pgr-103562 Puccinia graminis 31.11 1.70e-01 31.20
IUUC-Rno-105861 Rattus norvegicus 92.06 0.00e+00 658.00
IUUC-Sha-107045 Sarcophilus harrisii 89.15 0.00e+00 637.00
IUUC-Smo-109325 Selaginella moellendorffii 37.74 1.00e-37 150.00
IUUC-Sit-110624 Setaria italica 34.89 9.00e-27 114.00
IUUC-Stu-112433 Solanum tuberosum 35.80 8.00e-35 140.00
IUUC-Sar-113169 Sorex araneus 85.59 2.00e-138 485.00
IUUC-Sbi-114305 Sorghum bicolor 34.18 3.00e-27 116.00
IUUC-Ssc-115766 Sus scrofa 92.20 0.00e+00 654.00
IUUC-Tgu-116469 Taeniopygia guttata 87.32 3.00e-140 491.00
IUUC-Tru-117732 Takifugu rubripes 76.46 6.00e-144 503.00
IUUC-Tsy-119624 Tarsius syrichta 83.45 2.00e-175 608.00
IUUC-Tni-119852 Tetraodon nigroviridis 70.57 6.00e-135 474.00
IUUC-Tca-121865 Theobroma cacao 33.42 6.00e-38 151.00
IUUC-Tae-125925 Triticum aestivum 36.63 3.00e-27 116.00
IUUC-Tur-126237 Triticum urartu 36.45 1.00e-26 113.00
IUUC-Tbe-128148 Tupaia belangeri 85.63 1.00e-156 545.00
IUUC-Ttr-128793 Tursiops truncatus 91.47 0.00e+00 641.00
IUUC-Vpa-130625 Vicugna pacos 76.70 5.00e-145 507.00
IUUC-Vvi-131312 Vitis vinifera 32.99 2.00e-30 126.00
IUUC-Xtr-131790 Xenopus tropicalis 83.76 6.00e-155 540.00
IUUC-Xma-133377 Xiphophorus maculatus 74.18 6.00e-148 517.00
Created Date 25-Jun-2017

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