iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108728

UUCD1 version

UUC-SeM-01117

Ensembl Protein ID

EFJ07495

UniProt Accession

D8SYB1; D8SYB1_SELML

Genbank Protein ID

EFJ07495.1; EFJ10670.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Genbank Nucleotide ID

GL377684; GL377652

Gene Name

TRIP1-1; TRIP1-2; SELMODRAFT_236283; SELMODRAFT_269383

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_236283	EFJ07495	EFJ07495

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-30	103.6	50	89
UBD/Beta-Prp	4.70e-44	151.5	132	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH++ v+c++   ++t+l++Gs D ++k+WD+ tg++l++
   Q: 50   GHNGAVWCCDVsrHSTRLITGSADQSVKLWDVETGTQLHT 89
           8**********9644********************99985 PP

UBD/Beta-Prp

   S: 44   l....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk...ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghd 137
           l    ++++ g ++ ++ v + p  k++++++eD +i++wd++tg+ + +     gh++ ++sls+s++g+++++Gs+d+t+++wd++t + l+ t s ++
   Q: 132  LqqgsIKTFTGPTGRINRVVWGPLNKTIISAGEDTVIRIWDVETGEVIKKTDkenGHSRAITSLSLSADGSHFITGSQDKTAKLWDTRTLTLLK-TYSTER 231
           1555578888888888888888888899999999999999999999888887778899999999999999999999999999999999999998.444443 PP
   S: 138  gvvncvvvhpdgnllvsGslD..rtvrlWdlktgkllrtl............tgghtdsvyslsfdsngkelvsgsldgtvkl 206
             vn v+++p  n +v G+    ++v   d + gk   ++            +g h ++++ l+f+++g+++ sg++dg+v+l
   Q: 232  -PVNAVAISPLMNHVVVGGGQeaSQVTTSDRRAGKFEAKFfhkifcdeiggvRG-HFGPINALAFNPDGRSFSSGGEDGYVRL 312
           .68888888888777766654114566667788888888888888999888777.9999999999999999999999998887 PP

Organism

Selaginella moellendorffii

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLKYNR DGDLLFSCAK DHNPTVWYGH NGERLGTYRG HNGAVWCCDV 60
SRHSTRLITG SADQSVKLWD VETGTQLHTF NFVSPARAVD FAEGDKLAVI STDPFMESVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA TTCTCATGAA GGGCCACGAG CGCCCGCTCA CGTTCCTCAA GTATAACAGG 60
GACGGGGATC TGCTCTTCTC GTGCGCCAAG GATCACAATC CCACTGTGTG GTACGGCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

smo:SELMODRAFT_236283; smo:SELMODRAFT_269383

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	75.83	1.00e-50	192.00
IUUC-Aml-001321	Ailuropoda melanoleuca	48.15	5.00e-86	310.00
IUUC-Atr-002468	Amborella trichopoda	76.60	5.00e-86	309.00
IUUC-Apl-003841	Anas platyrhynchos	47.53	1.00e-85	308.00
IUUC-Aca-005123	Anolis carolinensis	47.38	2.00e-86	311.00
IUUC-Aly-005473	Arabidopsis lyrata	71.25	8.00e-142	495.00
IUUC-Ath-007094	Arabidopsis thaliana	69.11	4.00e-138	483.00
IUUC-Ago-008000	Ashbya gossypii	43.84	2.00e-74	271.00
IUUC-Acl-008098	Aspergillus clavatus	42.60	6.00e-75	273.00
IUUC-Afl-008494	Aspergillus flavus	44.27	8.00e-80	289.00
IUUC-Afu-009080	Aspergillus fumigatus	43.20	1.00e-76	279.00
IUUC-Ani-009230	Aspergillus nidulans	44.00	1.00e-77	282.00
IUUC-Aor-010114	Aspergillus oryzae	44.27	8.00e-80	289.00
IUUC-Ate-010285	Aspergillus terreus	44.65	4.00e-78	283.00
IUUC-Ame-011534	Astyanax mexicanus	47.42	7.00e-88	316.00
IUUC-Bgr-012121	Blumeria graminis	42.72	5.00e-74	270.00
IUUC-Bta-013143	Bos taurus	48.31	1.00e-86	312.00
IUUC-Bci-013950	Botrytis cinerea	44.79	9.00e-81	292.00
IUUC-Bdi-015019	Brachypodium distachyon	72.31	3.00e-142	496.00
IUUC-Bol-015709	Brassica oleracea	72.04	5.00e-142	497.00
IUUC-Bra-017760	Brassica rapa	72.04	4.00e-143	500.00
IUUC-Cel-018226	Caenorhabditis elegans	40.19	2.00e-72	265.00
IUUC-Cja-019741	Callithrix jacchus	48.31	6.00e-87	313.00
IUUC-Cfa-021204	Canis familiaris	48.15	4.00e-86	310.00
IUUC-Cpo-021661	Cavia porcellus	47.84	7.00e-86	309.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	51.86	1.00e-98	351.00
IUUC-Csa-024038	Chlorocebus sabaeus	48.31	6.00e-87	313.00
IUUC-Cin-025597	Ciona intestinalis	46.93	2.00e-86	311.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	42.41	1.00e-75	275.00
IUUC-Cne-026838	Cryptococcus neoformans	43.64	3.00e-80	291.00
IUUC-Cme-027304	Cyanidioschyzon merolae	52.62	7.00e-90	322.00
IUUC-Dre-028567	Danio rerio	48.00	3.00e-88	317.00
IUUC-Dno-029171	Dasypus novemcinctus	48.15	2.00e-85	308.00
IUUC-Dor-030257	Dipodomys ordii	36.14	4.00e-24	104.00
IUUC-Dse-031191	Dothistroma septosporum	44.21	3.00e-79	287.00
IUUC-Dme-031879	Drosophila melanogaster	49.07	1.00e-93	335.00
IUUC-Ete-032336	Echinops telfairi	49.35	9.00e-41	159.00
IUUC-Eca-033259	Equus caballus	48.15	5.00e-86	310.00
IUUC-Eeu-035153	Erinaceus europaeus	43.62	5.00e-29	120.00
IUUC-Fca-036489	Felis catus	48.15	5.00e-86	310.00
IUUC-Fal-037485	Ficedula albicollis	47.22	2.00e-85	308.00
IUUC-Fox-037860	Fusarium oxysporum	44.58	7.00e-78	283.00
IUUC-Fso-038188	Fusarium solani	43.96	1.00e-76	279.00
IUUC-Gmo-039311	Gadus morhua	47.53	1.00e-86	311.00
IUUC-Ggr-040045	Gaeumannomyces graminis	45.20	6.00e-79	286.00
IUUC-Gga-040645	Gallus gallus	46.55	4.00e-84	303.00
IUUC-Gac-042086	Gasterosteus aculeatus	46.77	2.00e-85	307.00
IUUC-Gma-043246	Glycine max	76.31	2.00e-153	533.00
IUUC-Ggo-045578	Gorilla gorilla	48.31	6.00e-87	313.00
IUUC-Hsa-046734	Homo sapiens	48.31	6.00e-87	313.00
IUUC-Hvu-047553	Hordeum vulgare	72.70	9.00e-143	498.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	47.84	1.00e-85	308.00
IUUC-Kpa-049325	Komagataella pastoris	45.57	4.00e-79	286.00
IUUC-Lch-049620	Latimeria chalumnae	48.84	3.00e-79	287.00
IUUC-Lpe-051338	Leersia perrieri	71.70	8.00e-135	472.00
IUUC-Loc-052094	Lepisosteus oculatus	42.90	2.00e-73	268.00
IUUC-Lma-053047	Leptosphaeria maculans	46.13	2.00e-81	294.00
IUUC-Laf-053801	Loxodonta africana	48.11	2.00e-83	301.00
IUUC-Mcc-055498	Macaca mulatta	42.46	7.00e-68	249.00
IUUC-Meu-056729	Macropus eugenii	44.79	2.00e-78	285.00
IUUC-Mor-057025	Magnaporthe oryzae	45.20	3.00e-77	281.00
IUUC-Mpo-057511	Magnaporthe poae	45.51	2.00e-77	281.00
IUUC-Mtr-058051	Medicago truncatula	76.00	2.00e-151	527.00
IUUC-Mla-059061	Melampsora laricipopulina	45.37	4.00e-80	290.00
IUUC-Mga-059229	Meleagris gallopavo	46.93	4.00e-83	300.00
IUUC-Mvi-060399	Microbotryum violaceum	42.39	5.00e-76	276.00
IUUC-Mmr-060764	Microcebus murinus	48.31	4.00e-87	313.00
IUUC-Mdo-062088	Monodelphis domestica	48.31	2.00e-87	315.00
IUUC-Mmu-064304	Mus musculus	48.00	9.00e-87	312.00
IUUC-Mac-065520	Musa acuminata	76.25	5.00e-151	525.00
IUUC-Mpu-066340	Mustela putorius furo	48.15	5.00e-86	310.00
IUUC-Mlu-067111	Myotis lucifugus	48.15	4.00e-86	310.00
IUUC-Nfi-068478	Neosartorya fischeri	43.20	3.00e-77	281.00
IUUC-Ncr-068820	Neurospora crassa	44.89	9.00e-78	282.00
IUUC-Nle-069903	Nomascus leucogenys	48.15	2.00e-86	311.00
IUUC-Opr-070221	Ochotona princeps	47.08	6.00e-84	303.00
IUUC-Ont-071765	Oreochromis niloticus	48.31	6.00e-90	323.00
IUUC-Oan-073660	Ornithorhynchus anatinus	46.23	3.00e-72	264.00
IUUC-Ocu-074039	Oryctolagus cuniculus	48.15	3.00e-86	310.00
IUUC-Oba-075395	Oryza barthii	66.15	2.00e-125	440.00
IUUC-Obr-076334	Oryza brachyantha	68.92	8.00e-134	468.00
IUUC-Ogl-077751	Oryza glaberrima	73.23	9.00e-145	505.00
IUUC-Ogu-078207	Oryza glumaepatula	71.69	3.00e-141	493.00
IUUC-Oin-079878	Oryza indica	72.00	9.00e-142	495.00
IUUC-Olo-080677	Oryza longistaminata	60.95	5.00e-130	456.00
IUUC-Ome-081228	Oryza meridionalis	54.17	4.00e-69	253.00
IUUC-Oni-082411	Oryza nivara	66.25	8.00e-125	438.00
IUUC-Opu-083136	Oryza punctata	73.23	1.00e-144	504.00
IUUC-Oru-084916	Oryza rufipogon	70.06	5.00e-140	489.00
IUUC-Osa-085776	Oryza sativa	73.23	9.00e-145	505.00
IUUC-Ola-087053	Oryzias latipes	47.08	1.00e-86	312.00
IUUC-Olu-087602	Ostreococcus lucimarinus	61.23	2.00e-119	421.00
IUUC-Oga-088154	Otolemur garnettii	47.84	3.00e-85	307.00
IUUC-Oar-089915	Ovis aries	48.15	6.00e-86	309.00
IUUC-Ptr-091124	Pan troglodytes	37.65	1.00e-56	212.00
IUUC-Pan-092035	Papio anubis	48.31	6.00e-87	313.00
IUUC-Psi-094096	Pelodiscus sinensis	49.44	9.00e-51	192.00
IUUC-Pno-094988	Phaeosphaeria nodorum	41.23	1.00e-67	249.00
IUUC-Ppa-095949	Physcomitrella patens	76.92	3.00e-154	536.00
IUUC-Pfo-096101	Poecilia formosa	47.69	1.00e-88	318.00
IUUC-Pab-097726	Pongo abelii	48.31	6.00e-87	313.00
IUUC-Pop-099617	Populus trichocarpa	74.46	3.00e-150	523.00
IUUC-Pca-101014	Procavia capensis	48.31	6.00e-87	313.00
IUUC-Ppe-101320	Prunus persica	75.38	3.00e-150	523.00
IUUC-Pva-102789	Pteropus vampyrus	56.38	4.00e-46	177.00
IUUC-Pgr-103479	Puccinia graminis	43.56	4.00e-78	284.00
IUUC-Ptt-103981	Puccinia triticina	43.89	6.00e-79	286.00
IUUC-Pte-104278	Pyrenophora teres	44.31	3.00e-77	281.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	44.31	3.00e-77	281.00
IUUC-Rno-105867	Rattus norvegicus	44.81	4.00e-75	273.00
IUUC-Sce-106251	Saccharomyces cerevisiae	41.27	3.00e-74	271.00
IUUC-Sha-107039	Sarcophilus harrisii	48.31	2.00e-87	315.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	44.17	7.00e-82	296.00
IUUC-Spo-108314	Schizosaccharomyces pombe	43.56	2.00e-82	298.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	44.48	4.00e-80	290.00
IUUC-Sit-110801	Setaria italica	71.69	1.00e-140	491.00
IUUC-Sly-111326	Solanum lycopersicum	75.69	3.00e-151	526.00
IUUC-Stu-112458	Solanum tuberosum	76.00	7.00e-152	528.00
IUUC-Sbi-114063	Sorghum bicolor	70.77	2.00e-139	487.00
IUUC-Sre-115096	Sporisorium reilianum	43.54	3.00e-72	264.00
IUUC-Ssc-116080	Sus scrofa	48.31	9.00e-87	312.00
IUUC-Tgu-116988	Taeniopygia guttata	47.22	2.00e-85	308.00
IUUC-Tru-118766	Takifugu rubripes	48.31	5.00e-89	320.00
IUUC-Tni-120197	Tetraodon nigroviridis	48.00	4.00e-89	320.00
IUUC-Tca-121316	Theobroma cacao	76.31	1.00e-152	531.00
IUUC-Tre-122097	Trichoderma reesei	45.20	1.00e-78	285.00
IUUC-Tvi-122442	Trichoderma virens	44.89	1.00e-78	285.00
IUUC-Tae-125800	Triticum aestivum	72.39	3.00e-142	497.00
IUUC-Tur-126334	Triticum urartu	62.27	8.00e-116	409.00
IUUC-Tme-127038	Tuber melanosporum	45.99	2.00e-83	301.00
IUUC-Ttr-128659	Tursiops truncatus	46.15	9.00e-68	249.00
IUUC-Uma-129464	Ustilago maydis	44.14	8.00e-73	266.00
IUUC-Vda-129841	Verticillium dahliae	44.58	2.00e-78	285.00
IUUC-Vvi-131076	Vitis vinifera	75.08	5.00e-151	526.00
IUUC-Xtr-132395	Xenopus tropicalis	48.77	2.00e-87	314.00
IUUC-Xma-133383	Xiphophorus maculatus	47.69	2.00e-88	317.00
IUUC-Yli-134586	Yarrowia lipolytica	45.54	2.00e-71	261.00
IUUC-Zma-135904	Zea mays	71.08	3.00e-140	490.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence