iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107350

Ensembl Protein ID

ENSSHAP00000022021.1

UniProt Accession

G3X2W6; G3X2W6_SARHA

Genbank Protein ID

ENSSHAP00000022021

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01123414

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000018641.1	ENSSHAT00000022197.1	ENSSHAP00000022021.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.60e-16	60.4	351	395

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 351  EFCRVCKDGGE----LLCCDTCPSSYHLHCLNPP-LPEIPNGE-WLCPRCT 395
           58*********....*******************.*******8.******6 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

QGSNDELSDN DEEMEEKSDS EGSDYSPNKK KKKKLKEKKE KKSKRKKKDE EDDDNEDGGL 60
KEPKSSGQLM EEWGLDDVDY LFSEEDYHTL TNYKAFSQFL RPLIAKKNPK IPMSKMMTVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGGAGCA ACGATGAGCT GTCTGATAAC GATGAGGAGA TGGAAGAGAA ATCTGACAGT 60
GAGGGGAGTG ATTATTCTCC GAATAAAAAG AAGAAGAAAA AACTCAAAGA GAAGAAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	85.59	0.00e+00	2615.00
IUUC-Apl-003406	Anas platyrhynchos	74.61	0.00e+00	2268.00
IUUC-Aca-004671	Anolis carolinensis	79.24	0.00e+00	2315.00
IUUC-Aly-005645	Arabidopsis lyrata	38.77	3.00e-150	527.00
IUUC-Ame-011883	Astyanax mexicanus	82.04	0.00e+00	1895.00
IUUC-Bta-012951	Bos taurus	80.17	0.00e+00	2308.00
IUUC-Bol-016073	Brassica oleracea	40.43	2.00e-155	544.00
IUUC-Bra-016724	Brassica rapa	40.66	2.00e-156	548.00
IUUC-Cja-018871	Callithrix jacchus	80.10	0.00e+00	2442.00
IUUC-Cfa-021063	Canis familiaris	86.40	0.00e+00	2567.00
IUUC-Cpo-022083	Cavia porcellus	84.81	0.00e+00	2552.00
IUUC-Csa-023084	Chlorocebus sabaeus	86.55	0.00e+00	2709.00
IUUC-Cin-025596	Ciona intestinalis	55.45	4.00e-62	232.00
IUUC-Dno-029923	Dasypus novemcinctus	92.91	0.00e+00	1890.00
IUUC-Eca-034372	Equus caballus	86.56	0.00e+00	2565.00
IUUC-Fca-036048	Felis catus	85.90	0.00e+00	2576.00
IUUC-Fal-037282	Ficedula albicollis	83.54	0.00e+00	2535.00
IUUC-Gga-040607	Gallus gallus	83.78	0.00e+00	2231.00
IUUC-Ggo-044514	Gorilla gorilla	86.44	0.00e+00	2702.00
IUUC-Hsa-046181	Homo sapiens	86.49	0.00e+00	2699.00
IUUC-Loc-052795	Lepisosteus oculatus	74.27	0.00e+00	2403.00
IUUC-Laf-053749	Loxodonta africana	87.08	0.00e+00	2684.00
IUUC-Mcc-055856	Macaca mulatta	86.53	0.00e+00	2706.00
IUUC-Meu-056050	Macropus eugenii	74.20	0.00e+00	983.00
IUUC-Mga-059630	Meleagris gallopavo	84.36	0.00e+00	2476.00
IUUC-Mmu-063644	Mus musculus	85.20	0.00e+00	2631.00
IUUC-Mpu-066528	Mustela putorius furo	89.22	0.00e+00	2243.00
IUUC-Nle-069824	Nomascus leucogenys	84.89	0.00e+00	2523.00
IUUC-Oga-088775	Otolemur garnettii	86.45	0.00e+00	2625.00
IUUC-Oar-090301	Ovis aries	85.06	0.00e+00	2327.00
IUUC-Ptr-090586	Pan troglodytes	84.59	0.00e+00	2672.00
IUUC-Pan-092282	Papio anubis	86.50	0.00e+00	2669.00
IUUC-Psi-093007	Pelodiscus sinensis	92.97	0.00e+00	1982.00
IUUC-Pab-097677	Pongo abelii	91.21	0.00e+00	2276.00
IUUC-Pca-100559	Procavia capensis	82.91	0.00e+00	2485.00
IUUC-Rno-105378	Rattus norvegicus	84.33	0.00e+00	2565.00
IUUC-Smo-108946	Selaginella moellendorffii	38.83	9.00e-158	551.00
IUUC-Ssc-116303	Sus scrofa	86.24	0.00e+00	2216.00
IUUC-Tgu-116779	Taeniopygia guttata	77.44	0.00e+00	2242.00
IUUC-Ttr-128301	Tursiops truncatus	84.15	0.00e+00	2581.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence