iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000014532.2	ENSCJAT00000028331.2	ENSCJAP00000026804.2
ENSCJAG00000014532.2	ENSCJAT00000028293.2	ENSCJAP00000026769.2
ENSCJAG00000014532.2	ENSCJAT00000028382.1	ENSCJAP00000026852.1
ENSCJAG00000014532.2	ENSCJAT00000028368.2	ENSCJAP00000026838.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-07	31.4	101	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           +Ht+++t l++ ++ + l+sG + g++ +W l+
   Q: 101  THTADITVLSWsPSgNCLLSGDRLGVLLLWKLD 133
           5***********6669**************986 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MALYFDHRIE APDAAGSPSH ISWHPVHPFL AVAYISTTST GSVDIYLEQA TCVPDTHVER 60
PFRVASLCWH PTRLVLAVGW ETGEVTVFNK QDKEQHPVSP THTADITVLS WSPSGNCLLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCCAATA GGCCAGCACC CAGGCTGTGA TTGGCCGCGG CCGTGTTGAC GGATACGTGA 60
GAAGAAAACG CCGCGGTAGC TCGGGGACTG GATTCCGGCG CGAACCTGAG TTCTGAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001534	Ailuropoda melanoleuca	80.20	0.00e+00	849.00
IUUC-Apl-004045	Anas platyrhynchos	67.78	0.00e+00	732.00
IUUC-Aca-004856	Anolis carolinensis	62.62	0.00e+00	668.00
IUUC-Bta-013342	Bos taurus	79.17	0.00e+00	807.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	22.56	2.00e-23	105.00
IUUC-Csa-023417	Chlorocebus sabaeus	93.70	0.00e+00	950.00
IUUC-Cin-025150	Ciona intestinalis	35.71	3.00e-85	310.00
IUUC-Csv-025810	Ciona savignyi	30.16	4.00e-61	229.00
IUUC-Dre-027680	Danio rerio	51.28	2.00e-155	543.00
IUUC-Eca-033444	Equus caballus	82.48	0.00e+00	899.00
IUUC-Fca-036025	Felis catus	79.92	0.00e+00	850.00
IUUC-Gmo-038491	Gadus morhua	53.82	3.00e-160	559.00
IUUC-Loc-052740	Lepisosteus oculatus	56.78	9.00e-176	611.00
IUUC-Mpu-065874	Mustela putorius furo	80.31	0.00e+00	851.00
IUUC-Mlu-067077	Myotis lucifugus	78.82	0.00e+00	830.00
IUUC-Ont-072303	Oreochromis niloticus	51.38	1.00e-147	518.00
IUUC-Ola-086338	Oryzias latipes	51.57	3.00e-157	550.00
IUUC-Ptr-090583	Pan troglodytes	91.14	0.00e+00	924.00
IUUC-Pan-092689	Papio anubis	93.11	0.00e+00	946.00
IUUC-Psi-093824	Pelodiscus sinensis	69.55	0.00e+00	755.00
IUUC-Pma-094497	Petromyzon marinus	51.96	3.00e-156	546.00
IUUC-Pfo-096612	Poecilia formosa	52.35	2.00e-152	533.00
IUUC-Pva-102236	Pteropus vampyrus	83.07	0.00e+00	848.00
IUUC-Sha-106814	Sarcophilus harrisii	76.12	0.00e+00	821.00
IUUC-Tru-118007	Takifugu rubripes	51.77	2.00e-152	533.00
IUUC-Ttr-128400	Tursiops truncatus	80.31	0.00e+00	845.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence