iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108365

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized ATP-dependent helicase C23E6.02

Genbank Nucleotide ID

CU329671

Gene Name

rrp2; SPBC23E6.02

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPBC23E6.02	SPBC23E6.02.1	SPBC23E6.02.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.87	7.00e-124	440.00	IUUC-Sce-106194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MRNNTAFEQF TLNPCEQIPL DDKHNIGFNK NNTPDYSSSA SSDQLLKNDI NRHEMERRIA 60
FLNRKQALFN AFMHDSSSSL NTMESNIEKV NGLFPNDNSV IALKPNEEKL NSSLSVENND 120

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Nucleotide Sequence
(Fasta)

GTTTTTATAA AATATGTATA CAGATGACTC TTCAATACCC CTTTGATTTC TTTCAGGTTT 60
ACTGATCAGC ATTTTTATAA AACTCTCCCA AAACAGAAAT TATTATAATA AGAATTTTTT 120

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Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000790--C:nuclear chromatin
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0004003--F:ATP-dependent DNA helicase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006338--P:chromatin remodeling
GO:0006281--P:DNA repair
GO:0000724--P:double-strand break repair via homologous recombination
GO:1990505--P:mitotic DNA replication maintenance of fidelity
GO:0016567--P:protein ubiquitination

KEGG

spo:SPBC23E6.02

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004994	Anolis carolinensis	31.40	2.00e-86	311.00
IUUC-Ago-007725	Ashbya gossypii	37.62	4.00e-125	441.00
IUUC-Acl-008336	Aspergillus clavatus	45.66	1.00e-94	339.00
IUUC-Afl-008458	Aspergillus flavus	46.12	2.00e-98	352.00
IUUC-Afu-008951	Aspergillus fumigatus	45.90	4.00e-97	348.00
IUUC-Ani-009199	Aspergillus nidulans	45.29	1.00e-106	379.00
IUUC-Ang-009874	Aspergillus niger	44.28	8.00e-152	528.00
IUUC-Aor-009948	Aspergillus oryzae	46.12	6.00e-98	350.00
IUUC-Ate-010469	Aspergillus terreus	43.54	8.00e-97	346.00
IUUC-Bgr-012000	Blumeria graminis	33.71	3.00e-86	311.00
IUUC-Bci-013730	Botrytis cinerea	38.24	2.00e-99	355.00
IUUC-Cgl-026675	Colletotrichum gloeosporioides	39.52	5.00e-77	281.00
IUUC-Cne-026959	Cryptococcus neoformans	32.33	3.00e-98	351.00
IUUC-Dor-030651	Dipodomys ordii	33.23	2.00e-43	169.00
IUUC-Dse-031175	Dothistroma septosporum	41.77	1.00e-95	342.00
IUUC-Fso-038275	Fusarium solani	43.68	3.00e-104	371.00
IUUC-Ggr-040047	Gaeumannomyces graminis	40.31	5.00e-84	304.00
IUUC-Kpa-049107	Komagataella pastoris	36.01	2.00e-119	421.00
IUUC-Lch-050617	Latimeria chalumnae	31.73	7.00e-86	310.00
IUUC-Lma-053036	Leptosphaeria maculans	39.78	3.00e-89	321.00
IUUC-Mor-057208	Magnaporthe oryzae	42.19	6.00e-91	327.00
IUUC-Mpo-057593	Magnaporthe poae	37.33	5.00e-82	297.00
IUUC-Mac-065666	Musa acuminata	32.62	3.00e-93	334.00
IUUC-Nfi-068359	Neosartorya fischeri	45.90	3.00e-97	348.00
IUUC-Oan-073331	Ornithorhynchus anatinus	31.06	2.00e-75	275.00
IUUC-Pno-094784	Phaeosphaeria nodorum	40.45	8.00e-86	310.00
IUUC-Ppe-101371	Prunus persica	33.38	2.00e-98	352.00
IUUC-Pte-104122	Pyrenophora teres	38.89	3.00e-86	311.00
IUUC-Pyt-104793	Pyrenophora triticirepentis	38.44	1.00e-84	306.00
IUUC-Sce-106194	Saccharomyces cerevisiae	36.71	7.00e-120	424.00
IUUC-Sja-107672	Schizosaccharomyces japonicus	51.50	0.00e+00	867.00
IUUC-Smo-109469	Selaginella moellendorffii	30.50	1.00e-84	306.00
IUUC-Sit-110351	Setaria italica	32.73	3.00e-103	368.00
IUUC-Sbi-114641	Sorghum bicolor	32.56	1.00e-98	353.00
IUUC-Tre-122222	Trichoderma reesei	41.11	1.00e-140	491.00
IUUC-Tvi-122366	Trichoderma virens	43.78	2.00e-99	355.00
IUUC-Tme-127220	Tuber melanosporum	47.30	6.00e-110	390.00
IUUC-Ttr-129132	Tursiops truncatus	33.23	9.00e-43	167.00
IUUC-Vda-129942	Verticillium dahliae	36.29	3.00e-82	298.00
IUUC-Zma-135168	Zea mays	32.12	5.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence