iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000003635.1	ENSLACT00000004127.1	ENSLACP00000004091.1
ENSLACG00000003635.1	ENSLACT00000004128.1	ENSLACP00000004092.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-41	139.2	512	544
UBD/Beta-Prp	2.40e-66	224.2	268	562

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gHtd +t+laf +d  l++s+s D+++++WD+r
   Q: 512  GHTDNITSLAFsPDsSLIASASMDNSVRLWDIR 544
           8***********999****************76 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.................................lrslsgheaevtavkfsp 62
           ++ ++ ++   +spd++lla+g++++++k+w+++++kl                                 ++ l gh ++v+ +kf +
   Q: 268  HNTDQLLNTAEISPDSKLLASGFDNSCVKLWSLRSKKLklepnqvdvskinlacdilgeededdersmgteMKILRGHCGPVYGTKFLS 356
           455666777889***************************************************************************** PP
   S: 63   dgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnl 151
           d++ l+++seD  i+ w+l++++ ++ ++gh + v+++++sp + +++sGs+drt+r+w  +    l+ + +gh + v c+++hp++n+
   Q: 357  DSSGLLSCSEDTSIRYWNLRSFTNTVLYHGHAYPVWDIDISPCSLYFASGSNDRTARLWTFDRTCPLR-IYAGHLADVDCIKFHPNSNY 444
           ***********************************************************999999999.******************** PP
   S: 152  lvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsg 240
           +++Gs+D+tvrlW+ ++g+ +r +tg h ++v sl+f++ngk+l+s+++d+++klwdl++g   + ++ghtdn++s++fsp++ +++s+
   Q: 445  IATGSTDKTVRLWSTQQGNAVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLSSGALYKDMRGHTDNITSLAFSPDSSLIASA 532
           *************************9.************************************************************** PP
   S: 241  ssDgsiriWdlrsgdllktlqlhnssvisv 270
           s+D+s+r+Wd+r+  +  t+ ++ s +i v
   Q: 533  SMDNSVRLWDIRNTYCSATTDGSSSELIGV 562
           *******************99999888776 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MKRVRTEQIQ MAAACYLKRR QYVDSDSALK QGLRLNQTAE EMAANLTELV LGVSYLNRHL 60
ILFPCIPEEE NYIVRLGRFQ DYLPTDSDSQ YSREVMPLLY PLFVYLHLDM VHNGLKSAAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCGAG TACGCACAGA GCAGATCCAG ATGGCAGCAG CTTGCTACCT CAAGCGGCGA 60
CAGTATGTGG ATTCGGATAG CGCACTAAAG CAAGGACTGC GATTGAATCA GACGGCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	39.94	1.00e-59	224.00
IUUC-Aml-002016	Ailuropoda melanoleuca	78.37	0.00e+00	848.00
IUUC-Apl-003636	Anas platyrhynchos	78.76	0.00e+00	914.00
IUUC-Aca-004229	Anolis carolinensis	79.43	0.00e+00	892.00
IUUC-Ame-010599	Astyanax mexicanus	62.87	0.00e+00	728.00
IUUC-Bta-013404	Bos taurus	74.82	0.00e+00	807.00
IUUC-Cja-019643	Callithrix jacchus	78.01	0.00e+00	857.00
IUUC-Cfa-020913	Canis familiaris	78.37	0.00e+00	858.00
IUUC-Cpo-021777	Cavia porcellus	76.95	0.00e+00	830.00
IUUC-Csa-024184	Chlorocebus sabaeus	78.01	0.00e+00	868.00
IUUC-Cho-024638	Choloepus hoffmanni	78.37	0.00e+00	849.00
IUUC-Cin-025618	Ciona intestinalis	34.69	8.00e-88	317.00
IUUC-Csv-025874	Ciona savignyi	33.66	1.00e-84	307.00
IUUC-Cne-026876	Cryptococcus neoformans	47.39	3.00e-69	256.00
IUUC-Dre-028817	Danio rerio	63.26	0.00e+00	707.00
IUUC-Dno-029969	Dasypus novemcinctus	72.70	0.00e+00	813.00
IUUC-Dor-031117	Dipodomys ordii	76.06	0.00e+00	850.00
IUUC-Ete-032712	Echinops telfairi	75.18	0.00e+00	805.00
IUUC-Eca-033742	Equus caballus	78.37	0.00e+00	858.00
IUUC-Eeu-035096	Erinaceus europaeus	76.95	0.00e+00	870.00
IUUC-Fca-035769	Felis catus	78.37	0.00e+00	890.00
IUUC-Fal-036645	Ficedula albicollis	80.18	0.00e+00	915.00
IUUC-Gmo-038636	Gadus morhua	59.59	0.00e+00	677.00
IUUC-Gga-040144	Gallus gallus	79.96	0.00e+00	901.00
IUUC-Gac-041716	Gasterosteus aculeatus	63.00	0.00e+00	716.00
IUUC-Ggo-044568	Gorilla gorilla	78.19	0.00e+00	858.00
IUUC-Hsa-046178	Homo sapiens	78.19	0.00e+00	858.00
IUUC-Itr-048967	Ictidomys tridecemlineatus	73.76	0.00e+00	847.00
IUUC-Loc-052895	Lepisosteus oculatus	77.91	4.00e-165	574.00
IUUC-Laf-053950	Loxodonta africana	75.53	0.00e+00	828.00
IUUC-Mcc-055450	Macaca mulatta	78.01	0.00e+00	853.00
IUUC-Meu-056182	Macropus eugenii	77.66	0.00e+00	854.00
IUUC-Mga-059619	Meleagris gallopavo	79.79	0.00e+00	899.00
IUUC-Mvi-060208	Microbotryum violaceum	43.45	2.00e-78	286.00
IUUC-Mmr-061074	Microcebus murinus	76.81	0.00e+00	868.00
IUUC-Mdo-062307	Monodelphis domestica	78.10	0.00e+00	741.00
IUUC-Mmu-063226	Mus musculus	75.18	0.00e+00	825.00
IUUC-Mpu-066016	Mustela putorius furo	78.19	0.00e+00	843.00
IUUC-Mlu-067257	Myotis lucifugus	73.52	0.00e+00	853.00
IUUC-Nle-070139	Nomascus leucogenys	78.37	0.00e+00	860.00
IUUC-Opr-070243	Ochotona princeps	76.81	0.00e+00	860.00
IUUC-Ont-072686	Oreochromis niloticus	64.24	0.00e+00	736.00
IUUC-Oan-073670	Ornithorhynchus anatinus	74.79	0.00e+00	732.00
IUUC-Ocu-074525	Oryctolagus cuniculus	78.01	0.00e+00	865.00
IUUC-Ola-086524	Oryzias latipes	64.24	0.00e+00	763.00
IUUC-Oga-088540	Otolemur garnettii	77.84	0.00e+00	855.00
IUUC-Oar-089793	Ovis aries	72.34	0.00e+00	752.00
IUUC-Ptr-091154	Pan troglodytes	78.19	0.00e+00	858.00
IUUC-Pan-092759	Papio anubis	78.01	0.00e+00	853.00
IUUC-Psi-094008	Pelodiscus sinensis	76.95	0.00e+00	876.00
IUUC-Pma-094593	Petromyzon marinus	42.37	4.00e-122	431.00
IUUC-Pfo-097409	Poecilia formosa	62.22	0.00e+00	714.00
IUUC-Pab-097946	Pongo abelii	71.63	0.00e+00	774.00
IUUC-Pca-100727	Procavia capensis	75.00	0.00e+00	805.00
IUUC-Pva-103211	Pteropus vampyrus	70.04	0.00e+00	798.00
IUUC-Pgr-103603	Puccinia graminis	41.90	2.00e-71	263.00
IUUC-Ptt-103995	Puccinia triticina	46.04	1.00e-68	255.00
IUUC-Rno-105236	Rattus norvegicus	75.71	0.00e+00	808.00
IUUC-Sha-106833	Sarcophilus harrisii	79.33	0.00e+00	879.00
IUUC-Sar-113381	Sorex araneus	78.55	0.00e+00	888.00
IUUC-Ssc-116421	Sus scrofa	76.95	0.00e+00	884.00
IUUC-Tgu-117143	Taeniopygia guttata	79.79	0.00e+00	915.00
IUUC-Tru-118680	Takifugu rubripes	63.72	0.00e+00	743.00
IUUC-Tsy-119622	Tarsius syrichta	68.09	0.00e+00	685.00
IUUC-Tni-120131	Tetraodon nigroviridis	63.37	0.00e+00	741.00
IUUC-Ttr-129171	Tursiops truncatus	75.71	0.00e+00	830.00
IUUC-Xtr-132241	Xenopus tropicalis	73.81	0.00e+00	832.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence