iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oar-089677

Ensembl Protein ID

ENSOARP00000001800.1

UniProt Accession

W5NUF6; W5NUF6_SHEEP

Genbank Protein ID

ENSOARP00000001800

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AMGL01056771

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOARG00000001712.1	ENSOART00000001844.1	ENSOARP00000001800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-42	142.1	150	184
UBD/Beta-Prp	5.20e-62	209.9	63	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 150  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 184
           8*******9659955588999***********876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 63   LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 150
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 151  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgs...iriWdlr 252
            v+ + +s+++ +l+s ++D++   +r+Wd+r
   Q: 238  SVTGLSLSSEGSYLLSNAMDNTefaVRVWDVR 269
           ******************9997777999*986 PP

Organism

Ovis aries

Protein Sequence
(Fasta)

MIEQQKRKGP ELPLVPVKRQ RHELLLGAAG SGPGAGQQQA APGALLQAGP PRCSSLQAPI 60
MLLSGHEGEV YCCKFHPNGS TLASAGFDRL ILLWNVYGDC DNYATLKGHS GAVMELHYNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAGAAC AGCAGAAGCG TAAGGGCCCA GAGTTGCCAC TGGTCCCAGT CAAGCGGCAG 60
CGACATGAAT TACTGTTGGG AGCGGCAGGG TCGGGCCCTG GAGCCGGGCA GCAGCAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	58.15	5.00e-118	417.00
IUUC-Aml-001428	Ailuropoda melanoleuca	95.94	3.00e-179	620.00
IUUC-Atr-003164	Amborella trichopoda	58.44	2.00e-120	424.00
IUUC-Apl-003447	Anas platyrhynchos	96.21	7.00e-161	559.00
IUUC-Aca-004270	Anolis carolinensis	90.68	4.00e-169	587.00
IUUC-Aly-005659	Arabidopsis lyrata	60.56	5.00e-123	434.00
IUUC-Ath-006764	Arabidopsis thaliana	61.22	4.00e-122	431.00
IUUC-Acl-008324	Aspergillus clavatus	46.96	6.00e-93	333.00
IUUC-Afl-008607	Aspergillus flavus	49.17	5.00e-88	317.00
IUUC-Afu-008998	Aspergillus fumigatus	46.67	1.00e-92	333.00
IUUC-Ani-009363	Aspergillus nidulans	48.59	6.00e-94	337.00
IUUC-Ang-009513	Aspergillus niger	48.04	2.00e-83	302.00
IUUC-Aor-010237	Aspergillus oryzae	47.54	3.00e-94	338.00
IUUC-Ate-010374	Aspergillus terreus	45.77	9.00e-82	296.00
IUUC-Ame-010728	Astyanax mexicanus	82.92	7.00e-170	589.00
IUUC-Bgr-012297	Blumeria graminis	45.65	8.00e-69	253.00
IUUC-Bta-012433	Bos taurus	99.17	0.00e+00	649.00
IUUC-Bci-013763	Botrytis cinerea	50.31	9.00e-94	336.00
IUUC-Bdi-014490	Brachypodium distachyon	58.36	5.00e-118	417.00
IUUC-Bol-016479	Brassica oleracea	59.88	8.00e-123	432.00
IUUC-Bra-017219	Brassica rapa	61.54	1.00e-122	432.00
IUUC-Cel-018512	Caenorhabditis elegans	55.73	2.00e-112	398.00
IUUC-Cja-019308	Callithrix jacchus	98.06	0.00e+00	652.00
IUUC-Cfa-020998	Canis familiaris	98.89	0.00e+00	655.00
IUUC-Cpo-021580	Cavia porcellus	97.78	0.00e+00	649.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	52.89	2.00e-106	378.00
IUUC-Csa-023456	Chlorocebus sabaeus	95.57	0.00e+00	651.00
IUUC-Cho-024644	Choloepus hoffmanni	98.72	3.00e-178	617.00
IUUC-Cin-025463	Ciona intestinalis	58.33	5.00e-125	440.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	47.65	6.00e-93	333.00
IUUC-Cne-026780	Cryptococcus neoformans	41.88	3.00e-66	245.00
IUUC-Dre-027671	Danio rerio	80.72	3.00e-175	607.00
IUUC-Dno-029769	Dasypus novemcinctus	98.06	0.00e+00	659.00
IUUC-Dor-030776	Dipodomys ordii	98.31	3.00e-86	311.00
IUUC-Dse-031316	Dothistroma septosporum	43.02	9.00e-85	306.00
IUUC-Dme-031756	Drosophila melanogaster	61.20	4.00e-123	434.00
IUUC-Ete-032753	Echinops telfairi	89.20	4.00e-163	567.00
IUUC-Eca-033979	Equus caballus	98.89	0.00e+00	649.00
IUUC-Eeu-034862	Erinaceus europaeus	97.89	1.00e-70	260.00
IUUC-Fca-036110	Felis catus	98.71	1.00e-158	551.00
IUUC-Fal-037648	Ficedula albicollis	96.17	2.00e-175	607.00
IUUC-Fox-037861	Fusarium oxysporum	45.83	4.00e-90	324.00
IUUC-Fso-038405	Fusarium solani	45.83	6.00e-90	323.00
IUUC-Gmo-039383	Gadus morhua	81.82	1.00e-170	592.00
IUUC-Ggr-040082	Gaeumannomyces graminis	45.00	4.00e-82	298.00
IUUC-Gga-040785	Gallus gallus	90.37	1.00e-178	619.00
IUUC-Gac-041645	Gasterosteus aculeatus	82.37	2.00e-168	584.00
IUUC-Gma-044329	Glycine max	60.00	2.00e-121	428.00
IUUC-Ggo-044800	Gorilla gorilla	86.13	6.00e-157	546.00
IUUC-Hsa-045918	Homo sapiens	95.57	0.00e+00	651.00
IUUC-Hvu-047342	Hordeum vulgare	58.15	1.00e-117	416.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	99.09	5.00e-113	399.00
IUUC-Kpa-049149	Komagataella pastoris	33.97	5.00e-35	141.00
IUUC-Lch-050395	Latimeria chalumnae	86.19	0.00e+00	647.00
IUUC-Lpe-051275	Leersia perrieri	58.20	4.00e-119	421.00
IUUC-Loc-052666	Lepisosteus oculatus	84.66	6.00e-171	593.00
IUUC-Lma-053129	Leptosphaeria maculans	44.83	2.00e-86	312.00
IUUC-Laf-054512	Loxodonta africana	95.84	0.00e+00	644.00
IUUC-Mcc-055819	Macaca mulatta	95.57	0.00e+00	651.00
IUUC-Meu-056350	Macropus eugenii	82.42	8.00e-158	549.00
IUUC-Mor-057063	Magnaporthe oryzae	47.96	3.00e-90	325.00
IUUC-Mpo-057369	Magnaporthe poae	45.94	8.00e-83	300.00
IUUC-Mtr-058228	Medicago truncatula	59.06	5.00e-121	427.00
IUUC-Mla-059093	Melampsora laricipopulina	41.99	8.00e-68	250.00
IUUC-Mga-059719	Meleagris gallopavo	95.90	7.00e-177	612.00
IUUC-Mvi-060285	Microbotryum violaceum	39.71	6.00e-62	231.00
IUUC-Mmr-061685	Microcebus murinus	92.52	4.00e-170	590.00
IUUC-Mdo-062121	Monodelphis domestica	91.21	0.00e+00	630.00
IUUC-Mmu-063216	Mus musculus	97.51	0.00e+00	660.00
IUUC-Mac-065463	Musa acuminata	55.11	2.00e-108	385.00
IUUC-Mpu-066390	Mustela putorius furo	98.61	0.00e+00	665.00
IUUC-Mlu-066932	Myotis lucifugus	98.26	5.00e-180	623.00
IUUC-Nfi-068509	Neosartorya fischeri	48.90	9.00e-93	333.00
IUUC-Ncr-068870	Neurospora crassa	47.06	3.00e-91	328.00
IUUC-Nle-069539	Nomascus leucogenys	95.57	0.00e+00	651.00
IUUC-Opr-070555	Ochotona princeps	86.43	1.00e-166	578.00
IUUC-Ont-071490	Oreochromis niloticus	81.32	5.00e-168	583.00
IUUC-Oan-073044	Ornithorhynchus anatinus	79.45	3.00e-155	541.00
IUUC-Ocu-073764	Oryctolagus cuniculus	98.61	0.00e+00	666.00
IUUC-Oba-075704	Oryza barthii	58.20	3.00e-119	421.00
IUUC-Obr-076455	Oryza brachyantha	58.51	8.00e-119	420.00
IUUC-Ogl-077382	Oryza glaberrima	58.51	2.00e-119	421.00
IUUC-Ogu-078739	Oryza glumaepatula	58.20	3.00e-119	421.00
IUUC-Oin-079072	Oryza indica	58.20	3.00e-119	421.00
IUUC-Olo-080809	Oryza longistaminata	58.20	3.00e-119	421.00
IUUC-Ome-081677	Oryza meridionalis	58.20	7.00e-119	419.00
IUUC-Oni-082937	Oryza nivara	58.20	3.00e-119	421.00
IUUC-Opu-083510	Oryza punctata	58.20	3.00e-119	421.00
IUUC-Oru-084360	Oryza rufipogon	58.20	5.00e-119	421.00
IUUC-Osa-085640	Oryza sativa	58.20	4.00e-119	421.00
IUUC-Ola-086504	Oryzias latipes	81.82	6.00e-170	589.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.23	1.00e-61	229.00
IUUC-Oga-088773	Otolemur garnettii	98.61	0.00e+00	654.00
IUUC-Ptr-090724	Pan troglodytes	95.38	2.00e-179	621.00
IUUC-Pan-092683	Papio anubis	95.57	0.00e+00	651.00
IUUC-Psi-093415	Pelodiscus sinensis	97.10	9.00e-175	605.00
IUUC-Pma-094562	Petromyzon marinus	74.52	1.00e-165	575.00
IUUC-Pno-095014	Phaeosphaeria nodorum	48.36	6.00e-87	314.00
IUUC-Ppa-095728	Physcomitrella patens	57.30	4.00e-120	424.00
IUUC-Pfo-096579	Poecilia formosa	81.54	2.00e-167	581.00
IUUC-Pab-098313	Pongo abelii	95.57	0.00e+00	651.00
IUUC-Pop-099747	Populus trichocarpa	60.90	7.00e-122	429.00
IUUC-Pca-100871	Procavia capensis	84.45	1.00e-128	451.00
IUUC-Ppe-101389	Prunus persica	60.56	5.00e-123	433.00
IUUC-Pva-102468	Pteropus vampyrus	100.00	2.00e-125	442.00
IUUC-Pgr-103523	Puccinia graminis	41.39	3.00e-71	262.00
IUUC-Ptt-103930	Puccinia triticina	41.30	6.00e-71	260.00
IUUC-Pte-104299	Pyrenophora teres	47.98	1.00e-92	332.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	48.60	1.00e-92	333.00
IUUC-Rno-105796	Rattus norvegicus	98.06	0.00e+00	653.00
IUUC-Sha-107191	Sarcophilus harrisii	90.93	0.00e+00	630.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.38	3.00e-62	231.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.40	1.00e-78	286.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	49.38	4.00e-93	334.00
IUUC-Sit-110805	Setaria italica	57.28	5.00e-118	417.00
IUUC-Sly-111567	Solanum lycopersicum	60.94	4.00e-124	437.00
IUUC-Stu-112562	Solanum tuberosum	60.75	6.00e-125	440.00
IUUC-Sar-112991	Sorex araneus	97.30	7.00e-119	419.00
IUUC-Sbi-114010	Sorghum bicolor	57.50	1.00e-117	416.00
IUUC-Sre-114947	Sporisorium reilianum	42.59	2.00e-72	266.00
IUUC-Ssc-115371	Sus scrofa	99.17	0.00e+00	649.00
IUUC-Tgu-117429	Taeniopygia guttata	93.55	5.00e-173	600.00
IUUC-Tru-118081	Takifugu rubripes	82.64	2.00e-171	595.00
IUUC-Tsy-119101	Tarsius syrichta	86.70	2.00e-158	551.00
IUUC-Tni-120532	Tetraodon nigroviridis	82.37	3.00e-168	584.00
IUUC-Tca-121373	Theobroma cacao	60.62	6.00e-124	436.00
IUUC-Tre-122050	Trichoderma reesei	45.19	9.00e-89	320.00
IUUC-Tvi-122394	Trichoderma virens	44.37	4.00e-83	301.00
IUUC-Tae-124661	Triticum aestivum	58.28	4.00e-117	414.00
IUUC-Tme-126998	Tuber melanosporum	50.96	1.00e-92	332.00
IUUC-Tbe-128032	Tupaia belangeri	98.34	0.00e+00	655.00
IUUC-Ttr-129102	Tursiops truncatus	88.64	9.00e-159	552.00
IUUC-Uma-129363	Ustilago maydis	43.21	5.00e-76	277.00
IUUC-Vda-129891	Verticillium dahliae	48.75	6.00e-92	330.00
IUUC-Vpa-130827	Vicugna pacos	98.34	0.00e+00	646.00
IUUC-Vvi-131202	Vitis vinifera	60.00	2.00e-122	431.00
IUUC-Xtr-132769	Xenopus tropicalis	82.21	2.00e-168	584.00
IUUC-Xma-133147	Xiphophorus maculatus	81.54	5.00e-167	580.00
IUUC-Yli-134352	Yarrowia lipolytica	33.77	8.00e-35	140.00
IUUC-Zma-135294	Zea mays	57.50	2.00e-117	415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence