iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091147

Ensembl Protein ID

ENSPTRP00000061322.1

UniProt Accession

H2RIG4; H2RIG4_PANTR

Genbank Protein ID

ENSPTRP00000061322

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03113280

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000040512.1	ENSPTRT00000075423.1	ENSPTRP00000061322.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	90.61	8.00e-162	566.00	IUUC-Hsa-046680
UBD/Other/Other	90.61	8.00e-162	566.00	IUUC-Hsa-046680
UBD/Other/Other	44.90	9.00e-47	181.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MFSFNMFNHL IPRVFQNHFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMLP STLDQLSQLN 60
ITYPMLFKLT SKNLDRMTHC GVLEFVADEG ICYLPHWMRQ NLLLEEGSLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTCTT TCAACATGTT CAACCACCTA ATTCCCAGGG TCTTCCAAAA CCACTTCTCC 60
ACACAGTACC GCTGCTTCTC TGTGTCCATG CTAGCAGGGC CTAATGACAG GTCAGATGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	48.20	7.00e-59	220.00
IUUC-Aml-001398	Ailuropoda melanoleuca	90.58	5.00e-158	550.00
IUUC-Atr-002449	Amborella trichopoda	45.16	3.00e-48	185.00
IUUC-Apl-004065	Anas platyrhynchos	83.33	1.00e-124	438.00
IUUC-Aca-004973	Anolis carolinensis	84.79	2.00e-153	534.00
IUUC-Aly-005501	Arabidopsis lyrata	48.29	5.00e-59	221.00
IUUC-Ath-007324	Arabidopsis thaliana	49.33	2.00e-59	223.00
IUUC-Ago-007918	Ashbya gossypii	39.68	3.00e-46	178.00
IUUC-Acl-008362	Aspergillus clavatus	39.05	2.00e-55	209.00
IUUC-Afl-008690	Aspergillus flavus	50.24	3.00e-55	209.00
IUUC-Afu-008787	Aspergillus fumigatus	41.44	1.00e-55	210.00
IUUC-Ani-009385	Aspergillus nidulans	51.41	4.00e-49	188.00
IUUC-Ang-009709	Aspergillus niger	51.23	7.00e-56	211.00
IUUC-Aor-010240	Aspergillus oryzae	50.24	3.00e-55	209.00
IUUC-Ate-010551	Aspergillus terreus	51.44	2.00e-56	213.00
IUUC-Ame-011417	Astyanax mexicanus	80.65	8.00e-140	489.00
IUUC-Bgr-011986	Blumeria graminis	51.55	3.00e-54	205.00
IUUC-Bta-012559	Bos taurus	89.52	8.00e-116	409.00
IUUC-Bci-013767	Botrytis cinerea	51.05	9.00e-50	190.00
IUUC-Bdi-014336	Brachypodium distachyon	48.02	2.00e-58	218.00
IUUC-Bol-015423	Brassica oleracea	48.26	7.00e-58	217.00
IUUC-Bra-017620	Brassica rapa	46.88	1.00e-53	202.00
IUUC-Cel-018590	Caenorhabditis elegans	43.17	4.00e-42	165.00
IUUC-Cja-019487	Callithrix jacchus	89.97	5.00e-158	550.00
IUUC-Cfa-020497	Canis familiaris	90.29	3.00e-158	550.00
IUUC-Cpo-022150	Cavia porcellus	90.26	3.00e-157	547.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	47.62	2.00e-52	198.00
IUUC-Csa-023602	Chlorocebus sabaeus	90.61	9.00e-159	552.00
IUUC-Cin-025594	Ciona intestinalis	53.16	1.00e-80	292.00
IUUC-Csv-026040	Ciona savignyi	52.12	2.00e-81	295.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	43.46	5.00e-44	171.00
IUUC-Cne-026990	Cryptococcus neoformans	37.31	2.00e-31	130.00
IUUC-Cme-027323	Cyanidioschyzon merolae	43.12	3.00e-35	142.00
IUUC-Dre-027987	Danio rerio	79.68	2.00e-136	478.00
IUUC-Dor-030294	Dipodomys ordii	88.03	9.00e-154	535.00
IUUC-Dse-031411	Dothistroma septosporum	46.60	1.00e-47	183.00
IUUC-Dme-031798	Drosophila melanogaster	52.48	1.00e-82	299.00
IUUC-Ete-032432	Echinops telfairi	88.67	3.00e-155	540.00
IUUC-Eca-034427	Equus caballus	90.61	9.00e-159	552.00
IUUC-Eeu-034917	Erinaceus europaeus	91.93	2.00e-81	295.00
IUUC-Fca-035380	Felis catus	90.29	3.00e-158	550.00
IUUC-Fal-037659	Ficedula albicollis	84.87	4.00e-148	516.00
IUUC-Fox-038062	Fusarium oxysporum	39.80	2.00e-17	81.30
IUUC-Fso-038111	Fusarium solani	41.38	8.00e-45	174.00
IUUC-Gmo-039298	Gadus morhua	78.46	2.00e-127	448.00
IUUC-Ggr-039771	Gaeumannomyces graminis	46.43	3.00e-48	185.00
IUUC-Gga-040313	Gallus gallus	85.76	4.00e-152	530.00
IUUC-Gac-042009	Gasterosteus aculeatus	77.88	6.00e-129	453.00
IUUC-Gma-043844	Glycine max	49.35	6.00e-61	227.00
IUUC-Ggo-044639	Gorilla gorilla	80.87	8.00e-153	532.00
IUUC-Hsa-046680	Homo sapiens	90.61	9.00e-159	552.00
IUUC-Hvu-047614	Hordeum vulgare	48.20	6.00e-59	221.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	90.58	5.00e-158	550.00
IUUC-Kpa-049136	Komagataella pastoris	37.45	8.00e-47	180.00
IUUC-Lch-050607	Latimeria chalumnae	79.93	2.00e-137	481.00
IUUC-Lpe-050726	Leersia perrieri	46.58	2.00e-54	206.00
IUUC-Loc-051848	Lepisosteus oculatus	81.03	1.00e-141	495.00
IUUC-Lma-053187	Leptosphaeria maculans	46.79	3.00e-55	208.00
IUUC-Laf-053569	Loxodonta africana	88.75	2.00e-154	538.00
IUUC-Mcc-055275	Macaca mulatta	90.29	8.00e-158	549.00
IUUC-Mor-056967	Magnaporthe oryzae	45.45	1.00e-48	187.00
IUUC-Mpo-057399	Magnaporthe poae	46.94	1.00e-48	186.00
IUUC-Mtr-058353	Medicago truncatula	48.21	3.00e-57	214.00
IUUC-Mla-058830	Melampsora laricipopulina	40.51	2.00e-35	143.00
IUUC-Mga-059803	Meleagris gallopavo	84.47	6.00e-126	442.00
IUUC-Mvi-060456	Microbotryum violaceum	42.63	3.00e-38	152.00
IUUC-Mmr-060573	Microcebus murinus	90.29	5.00e-158	550.00
IUUC-Mdo-062831	Monodelphis domestica	88.03	8.00e-155	539.00
IUUC-Mmu-064302	Mus musculus	89.32	1.00e-156	545.00
IUUC-Mac-064745	Musa acuminata	48.91	7.00e-59	221.00
IUUC-Mpu-065922	Mustela putorius furo	90.29	1.00e-158	551.00
IUUC-Mlu-068236	Myotis lucifugus	89.39	4.00e-156	543.00
IUUC-Nfi-068417	Neosartorya fischeri	41.44	9.00e-56	210.00
IUUC-Ncr-068747	Neurospora crassa	43.81	1.00e-45	176.00
IUUC-Nle-069948	Nomascus leucogenys	80.92	1.00e-153	535.00
IUUC-Opr-070919	Ochotona princeps	75.25	2.00e-121	427.00
IUUC-Ont-071467	Oreochromis niloticus	78.46	3.00e-134	470.00
IUUC-Oan-073436	Ornithorhynchus anatinus	69.70	1.00e-60	225.00
IUUC-Ocu-074427	Oryctolagus cuniculus	88.67	3.00e-148	517.00
IUUC-Oba-075440	Oryza barthii	49.12	1.00e-58	219.00
IUUC-Obr-076275	Oryza brachyantha	47.03	9.00e-53	200.00
IUUC-Ogl-077237	Oryza glaberrima	49.12	2.00e-58	219.00
IUUC-Ogu-078934	Oryza glumaepatula	49.12	1.00e-58	219.00
IUUC-Oin-079475	Oryza indica	49.56	5.00e-59	221.00
IUUC-Olo-080285	Oryza longistaminata	54.17	2.00e-49	187.00
IUUC-Ome-081887	Oryza meridionalis	48.46	2.00e-58	218.00
IUUC-Oni-082064	Oryza nivara	49.56	6.00e-59	220.00
IUUC-Opu-083610	Oryza punctata	48.46	2.00e-58	218.00
IUUC-Oru-084911	Oryza rufipogon	49.12	1.00e-58	219.00
IUUC-Osa-085366	Oryza sativa	49.12	1.00e-58	219.00
IUUC-Ola-086846	Oryzias latipes	68.57	2.00e-119	422.00
IUUC-Olu-087879	Ostreococcus lucimarinus	40.29	7.00e-49	187.00
IUUC-Oga-089017	Otolemur garnettii	89.07	5.00e-155	539.00
IUUC-Oar-089970	Ovis aries	85.71	2.00e-148	518.00
IUUC-Pan-091757	Papio anubis	83.55	2.00e-139	488.00
IUUC-Psi-093931	Pelodiscus sinensis	86.08	4.00e-152	530.00
IUUC-Pno-094775	Phaeosphaeria nodorum	44.25	1.00e-50	193.00
IUUC-Ppa-095156	Physcomitrella patens	47.79	1.00e-56	213.00
IUUC-Pfo-097295	Poecilia formosa	77.32	3.00e-132	464.00
IUUC-Pab-098537	Pongo abelii	90.61	9.00e-159	552.00
IUUC-Pop-099436	Populus trichocarpa	48.21	4.00e-59	221.00
IUUC-Pca-100631	Procavia capensis	78.39	3.00e-146	510.00
IUUC-Ppe-101259	Prunus persica	47.21	6.00e-60	224.00
IUUC-Pva-102679	Pteropus vampyrus	82.05	4.00e-140	490.00
IUUC-Pgr-103475	Puccinia graminis	42.35	5.00e-37	148.00
IUUC-Ptt-104012	Puccinia triticina	35.20	2.00e-25	109.00
IUUC-Pte-104071	Pyrenophora teres	46.79	3.00e-53	202.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	46.79	3.00e-53	202.00
IUUC-Rno-104858	Rattus norvegicus	89.32	1.00e-156	545.00
IUUC-Sce-106174	Saccharomyces cerevisiae	44.90	4.00e-47	181.00
IUUC-Sha-107075	Sarcophilus harrisii	87.99	2.00e-154	538.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	40.79	5.00e-52	197.00
IUUC-Spo-108259	Schizosaccharomyces pombe	41.25	2.00e-44	172.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	53.42	1.00e-42	166.00
IUUC-Smo-109290	Selaginella moellendorffii	48.91	2.00e-58	218.00
IUUC-Sit-109992	Setaria italica	48.89	2.00e-57	216.00
IUUC-Sly-110858	Solanum lycopersicum	47.11	1.00e-55	209.00
IUUC-Stu-112129	Solanum tuberosum	46.64	4.00e-56	211.00
IUUC-Sar-113061	Sorex araneus	89.64	2.00e-156	544.00
IUUC-Sbi-114882	Sorghum bicolor	48.68	1.00e-57	216.00
IUUC-Sre-115104	Sporisorium reilianum	43.52	4.00e-38	152.00
IUUC-Ssc-115403	Sus scrofa	89.64	2.00e-157	547.00
IUUC-Tgu-117013	Taeniopygia guttata	85.39	4.00e-151	526.00
IUUC-Tru-118307	Takifugu rubripes	78.71	6.00e-130	456.00
IUUC-Tsy-119309	Tarsius syrichta	81.43	2.00e-59	222.00
IUUC-Tni-120209	Tetraodon nigroviridis	78.14	6.00e-129	452.00
IUUC-Tca-121421	Theobroma cacao	46.44	7.00e-60	223.00
IUUC-Tre-122235	Trichoderma reesei	41.33	6.00e-44	171.00
IUUC-Tvi-122421	Trichoderma virens	41.46	9.00e-45	174.00
IUUC-Tae-124587	Triticum aestivum	48.20	4.00e-59	221.00
IUUC-Tur-126353	Triticum urartu	36.84	3.00e-19	90.10
IUUC-Tme-126918	Tuber melanosporum	48.97	8.00e-51	194.00
IUUC-Ttr-129286	Tursiops truncatus	81.12	2.00e-141	495.00
IUUC-Uma-129404	Ustilago maydis	44.56	3.00e-39	155.00
IUUC-Vda-129746	Verticillium dahliae	43.94	2.00e-45	176.00
IUUC-Vpa-130648	Vicugna pacos	88.24	1.00e-20	93.60
IUUC-Vvi-131301	Vitis vinifera	48.50	8.00e-59	220.00
IUUC-Xtr-132583	Xenopus tropicalis	82.52	2.00e-144	504.00
IUUC-Xma-133129	Xiphophorus maculatus	77.32	5.00e-132	463.00
IUUC-Yli-134515	Yarrowia lipolytica	44.50	8.00e-45	174.00
IUUC-Zma-135266	Zea mays	48.02	2.00e-57	215.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence