iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090913

Ensembl Protein ID

ENSPTRP00000011457.3

UniProt Accession

H2Q8X6; H2Q8X6_PANTR

Genbank Protein ID

ENSPTRP00000011457

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03097013

Gene Name

WDR25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000006722.3	ENSPTRT00000012376.3	ENSPTRP00000011457.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-17	63.4	244	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvW.Dlrtgvllk 37
           gH ++v+ +++    s  ++l+s s D+t kvW  +++g++l+
   Q: 244  GHRGPVNTIQWcpvlSKsHMLLSTSMDKTFKVWnAVDSGHCLQ 286
           8*************95569**************8888888877 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MTARTLSLMA SLVAYDDSDS EAETEHAGSF NATGQQKDTS GVARPPGQDF ASGTLDVPKA 60
GAQPTKHGSC EDPGGHRLPL AQLGRSDRGS CPSQRLQWPG KEPQVTFPIK EPSCSSLWTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGCAA GAACTCTGTC TTTAATGGCT TCATTGGTAG CGTATGATGA TTCGGACTCG 60
GAGGCTGAGA CAGAGCATGC AGGAAGTTTT AATGCCACCG GCCAGCAGAA AGACACTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001588	Ailuropoda melanoleuca	64.52	0.00e+00	677.00
IUUC-Atr-003155	Amborella trichopoda	30.79	3.00e-43	169.00
IUUC-Apl-003544	Anas platyrhynchos	45.97	7.00e-51	193.00
IUUC-Ath-007329	Arabidopsis thaliana	30.25	5.00e-46	178.00
IUUC-Ame-010607	Astyanax mexicanus	40.19	7.00e-39	153.00
IUUC-Bta-013542	Bos taurus	65.56	0.00e+00	699.00
IUUC-Bdi-014736	Brachypodium distachyon	31.86	2.00e-47	182.00
IUUC-Cja-018883	Callithrix jacchus	80.11	0.00e+00	861.00
IUUC-Cfa-021278	Canis familiaris	63.05	0.00e+00	661.00
IUUC-Cpo-022449	Cavia porcellus	65.60	1.00e-134	472.00
IUUC-Csa-023916	Chlorocebus sabaeus	85.26	0.00e+00	889.00
IUUC-Dno-029053	Dasypus novemcinctus	63.66	2.00e-109	388.00
IUUC-Dor-030299	Dipodomys ordii	68.87	1.00e-139	489.00
IUUC-Ete-032974	Echinops telfairi	49.05	2.00e-89	323.00
IUUC-Eca-033484	Equus caballus	61.40	1.00e-175	609.00
IUUC-Fca-035673	Felis catus	63.79	0.00e+00	644.00
IUUC-Fal-036795	Ficedula albicollis	52.60	1.00e-101	362.00
IUUC-Gmo-039062	Gadus morhua	42.65	2.00e-60	225.00
IUUC-Gga-040773	Gallus gallus	48.14	2.00e-78	285.00
IUUC-Gac-042364	Gasterosteus aculeatus	40.96	1.00e-58	219.00
IUUC-Gma-043100	Glycine max	29.78	1.00e-41	163.00
IUUC-Ggo-045220	Gorilla gorilla	87.68	0.00e+00	932.00
IUUC-Hsa-046511	Homo sapiens	88.42	0.00e+00	940.00
IUUC-Hvu-047431	Hordeum vulgare	30.65	5.00e-43	167.00
IUUC-Lch-049590	Latimeria chalumnae	50.18	3.00e-75	274.00
IUUC-Lpe-050810	Leersia perrieri	30.66	5.00e-32	131.00
IUUC-Loc-052196	Lepisosteus oculatus	45.43	2.00e-88	319.00
IUUC-Laf-053481	Loxodonta africana	71.95	2.00e-127	448.00
IUUC-Mcc-055622	Macaca mulatta	84.53	0.00e+00	895.00
IUUC-Meu-055978	Macropus eugenii	35.83	2.00e-40	159.00
IUUC-Mtr-058041	Medicago truncatula	29.78	3.00e-45	175.00
IUUC-Mga-060149	Meleagris gallopavo	45.45	6.00e-51	193.00
IUUC-Mmr-061552	Microcebus murinus	72.56	0.00e+00	798.00
IUUC-Mdo-061969	Monodelphis domestica	43.53	9.00e-119	420.00
IUUC-Mmu-063343	Mus musculus	68.66	0.00e+00	665.00
IUUC-Mac-065079	Musa acuminata	28.12	2.00e-38	153.00
IUUC-Mpu-065949	Mustela putorius furo	68.62	0.00e+00	649.00
IUUC-Mlu-067523	Myotis lucifugus	64.54	5.00e-168	583.00
IUUC-Nle-069645	Nomascus leucogenys	97.55	0.00e+00	710.00
IUUC-Ont-072361	Oreochromis niloticus	37.38	3.00e-78	285.00
IUUC-Ocu-074916	Oryctolagus cuniculus	71.87	2.00e-129	455.00
IUUC-Oba-075367	Oryza barthii	30.98	5.00e-37	148.00
IUUC-Obr-076738	Oryza brachyantha	31.73	2.00e-46	180.00
IUUC-Ogu-078590	Oryza glumaepatula	30.98	4.00e-37	148.00
IUUC-Oin-079678	Oryza indica	31.41	2.00e-42	166.00
IUUC-Olo-080453	Oryza longistaminata	30.69	3.00e-40	158.00
IUUC-Ome-081794	Oryza meridionalis	31.69	7.00e-32	131.00
IUUC-Oni-082432	Oryza nivara	31.41	2.00e-42	166.00
IUUC-Opu-083897	Oryza punctata	31.63	2.00e-42	166.00
IUUC-Oru-085068	Oryza rufipogon	29.41	2.00e-34	140.00
IUUC-Osa-085805	Oryza sativa	31.41	1.00e-42	167.00
IUUC-Ola-087567	Oryzias latipes	41.54	2.00e-59	222.00
IUUC-Oga-088168	Otolemur garnettii	73.13	0.00e+00	779.00
IUUC-Oar-090158	Ovis aries	58.93	8.00e-161	560.00
IUUC-Pan-092157	Papio anubis	85.64	0.00e+00	903.00
IUUC-Psi-093817	Pelodiscus sinensis	51.84	2.00e-79	288.00
IUUC-Pma-094263	Petromyzon marinus	51.08	2.00e-36	144.00
IUUC-Pfo-097526	Poecilia formosa	39.20	6.00e-75	274.00
IUUC-Pab-098152	Pongo abelii	82.82	0.00e+00	863.00
IUUC-Pop-099987	Populus trichocarpa	31.65	4.00e-48	185.00
IUUC-Pca-100527	Procavia capensis	67.08	2.00e-122	432.00
IUUC-Ppe-101575	Prunus persica	28.30	4.00e-45	175.00
IUUC-Pva-102942	Pteropus vampyrus	68.07	0.00e+00	728.00
IUUC-Rno-104857	Rattus norvegicus	67.35	0.00e+00	683.00
IUUC-Sha-106763	Sarcophilus harrisii	42.27	1.00e-113	403.00
IUUC-Sit-110488	Setaria italica	32.05	7.00e-43	167.00
IUUC-Sly-110893	Solanum lycopersicum	30.42	2.00e-46	179.00
IUUC-Stu-112566	Solanum tuberosum	29.77	5.00e-45	175.00
IUUC-Sar-113617	Sorex araneus	49.89	3.00e-98	352.00
IUUC-Sbi-114566	Sorghum bicolor	30.99	1.00e-44	173.00
IUUC-Tgu-117015	Taeniopygia guttata	52.60	3.00e-101	361.00
IUUC-Tsy-119467	Tarsius syrichta	61.59	2.00e-100	358.00
IUUC-Tca-121587	Theobroma cacao	29.56	7.00e-47	181.00
IUUC-Tae-123717	Triticum aestivum	31.61	5.00e-43	168.00
IUUC-Tbe-127502	Tupaia belangeri	70.22	1.00e-135	476.00
IUUC-Ttr-129033	Tursiops truncatus	72.38	0.00e+00	782.00
IUUC-Vvi-131505	Vitis vinifera	29.07	8.00e-45	174.00
IUUC-Xtr-132851	Xenopus tropicalis	41.35	2.00e-44	171.00
IUUC-Xma-133463	Xiphophorus maculatus	40.27	3.00e-75	275.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence