iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107777

Ensembl Protein ID

EEB05855

UniProt Accession

B6JWV4; B6JWV4_SCHJY

Genbank Protein ID

EEB05855.1

Protein Name

U3 snoRNP protein Utp4

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00879

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00879	EEB05855	EEB05855

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-19	66.5	156	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclafsdtllvsGsdDgtikvWDl 30
           t+++ +la+ d+llv G+ Dg +kvWD+
   Q: 156  TSRILSLAWKDNLLVGGCADGIVKVWDT 183
           789******669***************6 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDIHRCRFVD YTPSPITAVD FSHPADPTKH APPNLRLAVG RSNGNIEIWN PRHGWCMEAI 60
MYGAKSRSIE GLAWALTDNT PRLFSIGFST MITEWNLNTT KPLVHEASNA GAAWSLAINN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATCTTTTG GCATAGCACA GAGGGTTTTC ATGAACGAAT GATACCTGTC ACTACTTTCA 60
TTTGGTTGGT TTAACGTTAA CTTCAACCTT AAACAGCTTT TTGCTGCCCA CCACCCTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0072686--C:mitotic spindle
GO:0032040--C:small-subunit processome
GO:0034455--C:t-UTP complex
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0045943--P:positive regulation of transcription from RNA polymerase I promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	26.82	3.00e-47	181.00
IUUC-Aml-001310	Ailuropoda melanoleuca	28.72	2.00e-67	248.00
IUUC-Atr-003076	Amborella trichopoda	24.44	1.00e-25	109.00
IUUC-Apl-003367	Anas platyrhynchos	31.74	3.00e-10	55.80
IUUC-Aca-004429	Anolis carolinensis	29.13	2.00e-35	140.00
IUUC-Aly-006271	Arabidopsis lyrata	24.13	2.00e-42	165.00
IUUC-Ath-007331	Arabidopsis thaliana	24.61	1.00e-42	166.00
IUUC-Ago-007843	Ashbya gossypii	36.49	2.00e-121	427.00
IUUC-Acl-008229	Aspergillus clavatus	31.19	3.00e-104	371.00
IUUC-Afl-008438	Aspergillus flavus	31.93	9.00e-102	362.00
IUUC-Afu-008910	Aspergillus fumigatus	37.33	2.00e-89	322.00
IUUC-Ani-009321	Aspergillus nidulans	31.95	2.00e-85	308.00
IUUC-Ang-009592	Aspergillus niger	33.06	3.00e-102	364.00
IUUC-Aor-010220	Aspergillus oryzae	31.07	1.00e-105	375.00
IUUC-Ate-010317	Aspergillus terreus	31.99	2.00e-98	352.00
IUUC-Ame-010957	Astyanax mexicanus	28.15	1.00e-56	212.00
IUUC-Bgr-012057	Blumeria graminis	30.47	2.00e-94	338.00
IUUC-Bta-012473	Bos taurus	27.98	2.00e-65	241.00
IUUC-Bdi-014203	Brachypodium distachyon	26.21	2.00e-52	198.00
IUUC-Bol-016163	Brassica oleracea	25.43	1.00e-50	192.00
IUUC-Bra-017482	Brassica rapa	25.12	3.00e-51	194.00
IUUC-Cja-019942	Callithrix jacchus	28.44	2.00e-64	238.00
IUUC-Cfa-020549	Canis familiaris	30.49	8.00e-52	196.00
IUUC-Cpo-022088	Cavia porcellus	27.83	8.00e-62	229.00
IUUC-Csa-023773	Chlorocebus sabaeus	28.44	6.00e-66	243.00
IUUC-Cho-024302	Choloepus hoffmanni	27.63	1.00e-49	189.00
IUUC-Cin-025384	Ciona intestinalis	25.34	7.00e-61	226.00
IUUC-Dre-027460	Danio rerio	26.59	2.00e-61	228.00
IUUC-Dno-029594	Dasypus novemcinctus	28.49	7.00e-63	233.00
IUUC-Dor-030564	Dipodomys ordii	25.22	4.00e-28	117.00
IUUC-Dse-031179	Dothistroma septosporum	32.93	2.00e-68	252.00
IUUC-Dme-031603	Drosophila melanogaster	22.70	5.00e-29	120.00
IUUC-Ete-032655	Echinops telfairi	27.92	3.00e-53	201.00
IUUC-Eca-033838	Equus caballus	28.53	1.00e-67	248.00
IUUC-Eeu-034548	Erinaceus europaeus	28.11	3.00e-59	221.00
IUUC-Fca-035715	Felis catus	28.95	2.00e-66	244.00
IUUC-Fal-037394	Ficedula albicollis	26.31	3.00e-43	167.00
IUUC-Gmo-039235	Gadus morhua	25.30	1.00e-43	169.00
IUUC-Ggr-040043	Gaeumannomyces graminis	28.76	7.00e-77	280.00
IUUC-Gga-041172	Gallus gallus	25.91	2.00e-56	211.00
IUUC-Gac-042466	Gasterosteus aculeatus	26.96	4.00e-60	224.00
IUUC-Gma-044222	Glycine max	22.52	5.00e-41	160.00
IUUC-Ggo-045416	Gorilla gorilla	27.19	9.00e-58	216.00
IUUC-Hsa-046115	Homo sapiens	28.87	4.00e-63	234.00
IUUC-Hvu-047229	Hordeum vulgare	27.20	4.00e-47	180.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	28.92	6.00e-68	249.00
IUUC-Kpa-049370	Komagataella pastoris	33.99	3.00e-111	394.00
IUUC-Lch-050153	Latimeria chalumnae	27.24	7.00e-56	209.00
IUUC-Lpe-051220	Leersia perrieri	24.45	2.00e-47	182.00
IUUC-Loc-052617	Lepisosteus oculatus	27.99	4.00e-65	240.00
IUUC-Laf-053613	Loxodonta africana	28.17	3.00e-65	241.00
IUUC-Mcc-055707	Macaca mulatta	28.21	2.00e-61	228.00
IUUC-Meu-056800	Macropus eugenii	26.39	2.00e-24	105.00
IUUC-Mor-057245	Magnaporthe oryzae	30.97	2.00e-79	288.00
IUUC-Mpo-057446	Magnaporthe poae	34.00	1.00e-69	255.00
IUUC-Mtr-058748	Medicago truncatula	23.67	1.00e-40	159.00
IUUC-Mga-060018	Meleagris gallopavo	26.89	1.00e-51	196.00
IUUC-Mmr-061115	Microcebus murinus	28.86	9.00e-65	239.00
IUUC-Mdo-062235	Monodelphis domestica	28.11	2.00e-65	241.00
IUUC-Mmu-063158	Mus musculus	28.44	3.00e-67	247.00
IUUC-Mac-065380	Musa acuminata	24.34	4.00e-50	191.00
IUUC-Mpu-065805	Mustela putorius furo	28.74	1.00e-67	249.00
IUUC-Mlu-066951	Myotis lucifugus	28.24	3.00e-64	237.00
IUUC-Nfi-068295	Neosartorya fischeri	32.46	2.00e-105	375.00
IUUC-Ncr-068880	Neurospora crassa	34.06	6.00e-77	280.00
IUUC-Nle-069657	Nomascus leucogenys	28.84	2.00e-67	248.00
IUUC-Opr-070250	Ochotona princeps	28.50	2.00e-64	238.00
IUUC-Ont-072642	Oreochromis niloticus	29.38	4.00e-57	214.00
IUUC-Ocu-074741	Oryctolagus cuniculus	28.71	3.00e-67	247.00
IUUC-Oba-074974	Oryza barthii	25.00	8.00e-49	186.00
IUUC-Obr-076586	Oryza brachyantha	26.42	4.00e-46	177.00
IUUC-Ogl-077782	Oryza glaberrima	25.00	6.00e-50	190.00
IUUC-Ogu-078333	Oryza glumaepatula	24.45	6.00e-46	177.00
IUUC-Oin-079852	Oryza indica	25.37	4.00e-51	194.00
IUUC-Olo-080370	Oryza longistaminata	26.83	3.00e-44	171.00
IUUC-Ome-081442	Oryza meridionalis	24.73	4.00e-49	187.00
IUUC-Oni-082341	Oryza nivara	24.25	6.00e-46	177.00
IUUC-Opu-083824	Oryza punctata	24.61	4.00e-48	184.00
IUUC-Oru-084827	Oryza rufipogon	25.21	3.00e-50	191.00
IUUC-Osa-085742	Oryza sativa	25.21	4.00e-51	194.00
IUUC-Ola-086466	Oryzias latipes	26.62	8.00e-58	216.00
IUUC-Olu-087761	Ostreococcus lucimarinus	25.31	2.00e-44	171.00
IUUC-Oga-088721	Otolemur garnettii	29.52	2.00e-55	208.00
IUUC-Oar-089532	Ovis aries	27.71	2.00e-65	241.00
IUUC-Ptr-091604	Pan troglodytes	28.94	2.00e-67	248.00
IUUC-Pan-092060	Papio anubis	32.19	3.00e-42	163.00
IUUC-Psi-093070	Pelodiscus sinensis	25.96	1.00e-52	198.00
IUUC-Pma-094201	Petromyzon marinus	26.11	2.00e-37	148.00
IUUC-Pno-094924	Phaeosphaeria nodorum	30.23	9.00e-32	129.00
IUUC-Ppa-095599	Physcomitrella patens	29.03	2.00e-37	149.00
IUUC-Pfo-097207	Poecilia formosa	27.41	1.00e-56	212.00
IUUC-Pab-097746	Pongo abelii	28.34	2.00e-66	245.00
IUUC-Pop-099991	Populus trichocarpa	24.14	3.00e-42	164.00
IUUC-Pca-100562	Procavia capensis	28.09	5.00e-39	154.00
IUUC-Ppe-101747	Prunus persica	23.27	3.00e-42	164.00
IUUC-Pva-103054	Pteropus vampyrus	28.98	3.00e-66	244.00
IUUC-Pte-104064	Pyrenophora teres	32.06	3.00e-77	281.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	33.57	1.00e-80	292.00
IUUC-Rno-105155	Rattus norvegicus	28.30	6.00e-66	243.00
IUUC-Sce-106369	Saccharomyces cerevisiae	34.72	1.00e-128	451.00
IUUC-Sha-107149	Sarcophilus harrisii	28.69	5.00e-66	243.00
IUUC-Spo-108372	Schizosaccharomyces pombe	61.88	0.00e+00	927.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	30.35	7.00e-95	339.00
IUUC-Smo-108851	Selaginella moellendorffii	23.64	3.00e-43	168.00
IUUC-Sit-110454	Setaria italica	23.92	7.00e-47	180.00
IUUC-Sly-111875	Solanum lycopersicum	24.34	1.00e-42	166.00
IUUC-Stu-112275	Solanum tuberosum	23.47	2.00e-39	155.00
IUUC-Sar-113254	Sorex araneus	36.59	1.00e-23	102.00
IUUC-Sbi-114624	Sorghum bicolor	26.23	2.00e-43	168.00
IUUC-Sre-114985	Sporisorium reilianum	27.52	3.00e-31	129.00
IUUC-Tgu-117407	Taeniopygia guttata	26.03	5.00e-33	133.00
IUUC-Tru-118733	Takifugu rubripes	30.65	4.00e-51	194.00
IUUC-Tsy-119213	Tarsius syrichta	30.23	7.00e-32	130.00
IUUC-Tni-120894	Tetraodon nigroviridis	29.91	9.00e-37	145.00
IUUC-Tca-121606	Theobroma cacao	23.47	6.00e-44	170.00
IUUC-Tre-121958	Trichoderma reesei	33.20	8.00e-77	280.00
IUUC-Tvi-122290	Trichoderma virens	33.47	1.00e-77	282.00
IUUC-Tae-125538	Triticum aestivum	24.82	5.00e-50	190.00
IUUC-Tme-126995	Tuber melanosporum	30.72	4.00e-102	363.00
IUUC-Tbe-127605	Tupaia belangeri	28.40	4.00e-10	57.80
IUUC-Ttr-128720	Tursiops truncatus	27.81	6.00e-64	236.00
IUUC-Uma-129564	Ustilago maydis	27.70	2.00e-30	125.00
IUUC-Vpa-130412	Vicugna pacos	33.20	6.00e-33	133.00
IUUC-Vvi-131256	Vitis vinifera	23.31	1.00e-44	172.00
IUUC-Xtr-131828	Xenopus tropicalis	25.74	3.00e-49	187.00
IUUC-Xma-133394	Xiphophorus maculatus	28.36	2.00e-56	211.00
IUUC-Yli-134565	Yarrowia lipolytica	37.64	2.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence