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Tag Content
iUUCD ID IUUC-Lch-049905
Ensembl Protein ID ENSLACP00000020944.1
UniProt Accession H3BGC3; H3BGC3_LATCH
Genbank Protein ID ENSLACP00000020944
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01007606
Gene Name WDR38
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000018402.1 ENSLACT00000021084.1 ENSLACP00000020944.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-47 157.8 187 222
UBD/Beta-Prp 5.70e-66 222.9 14 198
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
    gH++ v+c++f s ++l++Gs+D t++vW++++gvl
   Q: 187 GHKGNVSCVCFsvS-GMLATGSWDRTVRVWNPKKGVL 222
    8**********744.****************999986 PP
   


   UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
    ++ + +h++ev+++ fspd +il+ +s+D+ ++vw+++t k + ++kgh+ v +++fsp+ + ++s+shd t+rvw++ t +cl+ +l
   Q: 14 IKYFPEHKGEVNSCAFSPDCQILLACSDDNRVYVWNVKTQKLICKVKGHTGPVNACAFSPDCSIFASASHDCTVRVWKTATTECLH-VL 101
    566789******************************************************99************************.** PP
   S: 134 sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
    + h ++v +v+++pd++ l s++ D t lWd + g l+t+ g h+d ++s +f+ ng++l++gs d t klw+l++ e +tl+gh+
   Q: 102 KDHLKSVETVCFNPDSRQLLSAGWDYTAILWDAQLGLNLKTFYG-HQDVIQSSAFSLNGQFLATGSWDYTAKLWNLRKDEPEKTLEGHK 189
    ******************************************99.******************************************** PP
   S: 223 dnvksvrfs 231
    nv++v fs
   Q: 190 GNVSCVCFS 198
    ******887 PP
   

Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MWRNPIESFV ITNIKYFPEH KGEVNSCAFS PDCQILLACS DDNRVYVWNV KTQKLICKVK 60
GHTGPVNACA FSPDCSIFAS ASHDCTVRVW KTATTECLHV LKDHLKSVET VCFNPDSRQL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Lch-049905|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTGGAGGA ATCCCATAGA AAGCTTTGTC ATAACTAACA TAAAATATTT TCCGGAACAC 60
AAGGGTGAGG TAAGAAAAGA TCTGTTATTT TTTATTTTCT ATATCATTAT ACGCTTCAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Lch-049905|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001664 Ailuropoda melanoleuca 50.87 3.00e-86 311.00
IUUC-Ame-010858 Astyanax mexicanus 55.67 1.00e-91 329.00
IUUC-Bta-012352 Bos taurus 49.15 9.00e-86 309.00
IUUC-Cja-019585 Callithrix jacchus 50.00 1.00e-85 309.00
IUUC-Cfa-020062 Canis familiaris 49.64 2.00e-72 265.00
IUUC-Csa-023528 Chlorocebus sabaeus 51.56 8.00e-89 320.00
IUUC-Cin-025426 Ciona intestinalis 43.51 6.00e-68 250.00
IUUC-Dre-027740 Danio rerio 53.66 1.00e-58 219.00
IUUC-Dno-030012 Dasypus novemcinctus 45.18 2.00e-83 301.00
IUUC-Dor-030536 Dipodomys ordii 50.65 3.00e-65 241.00
IUUC-Ete-032871 Echinops telfairi 54.15 2.00e-71 261.00
IUUC-Eca-033729 Equus caballus 51.74 4.00e-90 324.00
IUUC-Eeu-034740 Erinaceus europaeus 49.83 6.00e-84 303.00
IUUC-Fca-036514 Felis catus 50.35 5.00e-88 317.00
IUUC-Fox-037826 Fusarium oxysporum 39.49 5.00e-47 184.00
IUUC-Ggo-044793 Gorilla gorilla 51.56 1.00e-87 315.00
IUUC-Hsa-046414 Homo sapiens 52.07 1.00e-87 316.00
IUUC-Itr-048798 Ictidomys tridecemlineatus 47.95 3.00e-74 271.00
IUUC-Loc-052101 Lepisosteus oculatus 66.21 8.00e-120 422.00
IUUC-Laf-053443 Loxodonta africana 49.01 8.00e-83 300.00
IUUC-Mcc-055346 Macaca mulatta 51.90 2.00e-89 322.00
IUUC-Meu-056531 Macropus eugenii 56.71 2.00e-73 267.00
IUUC-Mla-058997 Melampsora laricipopulina 33.21 1.00e-36 148.00
IUUC-Mmr-061721 Microcebus murinus 51.72 2.00e-87 315.00
IUUC-Mdo-062379 Monodelphis domestica 54.51 2.00e-94 338.00
IUUC-Mmu-064175 Mus musculus 49.49 2.00e-83 301.00
IUUC-Mpu-066361 Mustela putorius furo 52.08 3.00e-88 318.00
IUUC-Mlu-067300 Myotis lucifugus 42.66 7.00e-57 213.00
IUUC-Nle-070150 Nomascus leucogenys 51.38 5.00e-87 313.00
IUUC-Opr-071060 Ochotona princeps 44.22 5.00e-65 240.00
IUUC-Ocu-074101 Oryctolagus cuniculus 47.97 6.00e-85 307.00
IUUC-Oga-088479 Otolemur garnettii 51.39 3.00e-86 311.00
IUUC-Oar-089608 Ovis aries 49.32 1.00e-85 309.00
IUUC-Ptr-091521 Pan troglodytes 52.60 2.00e-90 325.00
IUUC-Pan-092092 Papio anubis 52.25 1.00e-89 322.00
IUUC-Pab-098454 Pongo abelii 51.56 2.00e-88 318.00
IUUC-Pca-100981 Procavia capensis 51.21 2.00e-86 311.00
IUUC-Pva-102491 Pteropus vampyrus 53.29 2.00e-91 328.00
IUUC-Rno-105417 Rattus norvegicus 52.55 3.00e-82 298.00
IUUC-Sha-107649 Sarcophilus harrisii 56.10 9.00e-97 346.00
IUUC-Sar-113110 Sorex araneus 40.97 4.00e-48 184.00
IUUC-Ssc-116197 Sus scrofa 50.17 4.00e-86 311.00
IUUC-Tbe-127734 Tupaia belangeri 49.70 2.00e-45 175.00
IUUC-Ttr-128709 Tursiops truncatus 48.96 2.00e-79 288.00
Created Date 25-Jun-2017

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