iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G58220	AT3G58220.2	AT3G58220.2
AT3G58220	AT3G58220.1	AT3G58220.1
AT3G58220	AT3G58220.4	AT3G58220.4
AT3G58220	AT3G58220.3	AT3G58220.3
AT3G58220	AT3G58220.5	AT3G58220.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.46	2.00e-07	54.30	IUUC-Hsa-046400
E3 activity/RING/RING	29.46	2.00e-07	54.30	IUUC-Mmu-064161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGRIGSPLGK NEFSWVIKDF SSLGVRAIYS DEFVIGGCKW RLIAYPMGNR IKKYMSLYVE 60
VADSKHLPSG WSINTELRME VVNHNLYKPS QQKYRKNLWF DQKTPSWGYK TMIRHSKLSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTTGGATT TGTGTGTGCT GTGCCACACT CTCCACTCTT TAGGGTTGCG ACGGAGTCTT 60
CAATGGGGAG AATAGGGAGT CCACTTGGTA AGAACGAGTT CAGTTGGGTA ATCAAGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR008974--TRAF-like

PROSITE

PS50144--MATH

Pfam

PF00917--MATH

SMART

SM00061--MATH

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002402	Ailuropoda melanoleuca	29.46	1.00e-08	55.10
IUUC-Apl-003421	Anas platyrhynchos	29.46	1.00e-08	55.10
IUUC-Aca-004895	Anolis carolinensis	28.68	4.00e-08	53.10
IUUC-Aly-005536	Arabidopsis lyrata	84.00	2.00e-74	271.00
IUUC-Ame-011010	Astyanax mexicanus	30.23	6.00e-08	52.80
IUUC-Bta-012395	Bos taurus	29.46	1.00e-08	54.70
IUUC-Cja-019077	Callithrix jacchus	29.46	1.00e-08	55.10
IUUC-Cfa-020944	Canis familiaris	29.46	1.00e-08	55.10
IUUC-Cpo-021701	Cavia porcellus	29.46	1.00e-08	55.10
IUUC-Csa-023468	Chlorocebus sabaeus	29.46	1.00e-08	55.10
IUUC-Dre-027580	Danio rerio	31.01	6.00e-08	52.80
IUUC-Dno-029665	Dasypus novemcinctus	29.46	2.00e-08	54.30
IUUC-Eca-034388	Equus caballus	29.46	1.00e-08	55.10
IUUC-Fca-035842	Felis catus	29.46	1.00e-08	55.10
IUUC-Fal-037490	Ficedula albicollis	29.37	5.00e-08	52.80
IUUC-Gga-040199	Gallus gallus	29.46	2.00e-08	54.70
IUUC-Gac-041724	Gasterosteus aculeatus	31.01	8.00e-08	52.00
IUUC-Hsa-046400	Homo sapiens	29.46	1.00e-08	55.10
IUUC-Itr-048382	Ictidomys tridecemlineatus	29.46	1.00e-08	55.10
IUUC-Loc-051900	Lepisosteus oculatus	31.54	7.00e-07	49.30
IUUC-Laf-053606	Loxodonta africana	29.46	1.00e-08	55.10
IUUC-Mcc-054607	Macaca mulatta	29.46	1.00e-08	55.10
IUUC-Meu-056746	Macropus eugenii	28.32	6.00e-06	45.80
IUUC-Mga-060028	Meleagris gallopavo	29.46	2.00e-08	54.70
IUUC-Mmr-061345	Microcebus murinus	29.46	1.00e-08	54.70
IUUC-Mdo-062615	Monodelphis domestica	29.46	2.00e-08	54.30
IUUC-Mmu-064161	Mus musculus	29.46	1.00e-08	55.10
IUUC-Mpu-066437	Mustela putorius furo	29.46	1.00e-08	55.10
IUUC-Mlu-068208	Myotis lucifugus	29.46	1.00e-08	55.10
IUUC-Nle-069104	Nomascus leucogenys	29.46	1.00e-08	55.10
IUUC-Ont-071969	Oreochromis niloticus	31.01	1.00e-07	52.00
IUUC-Ocu-074943	Oryctolagus cuniculus	29.46	1.00e-08	55.10
IUUC-Oga-088371	Otolemur garnettii	29.46	1.00e-08	54.70
IUUC-Oar-090383	Ovis aries	29.46	1.00e-08	54.70
IUUC-Ptr-091450	Pan troglodytes	29.46	1.00e-08	55.10
IUUC-Psi-093665	Pelodiscus sinensis	29.46	1.00e-08	54.70
IUUC-Pfo-097163	Poecilia formosa	37.74	2.00e-04	40.40
IUUC-Pab-098742	Pongo abelii	29.46	1.00e-08	55.10
IUUC-Rno-105564	Rattus norvegicus	29.46	1.00e-08	55.10
IUUC-Tgu-117396	Taeniopygia guttata	29.46	2.00e-08	54.70
IUUC-Tru-118296	Takifugu rubripes	31.01	1.00e-07	51.60
IUUC-Tsy-119188	Tarsius syrichta	29.46	1.00e-08	55.10
IUUC-Tbe-127682	Tupaia belangeri	27.91	5.00e-06	46.20
IUUC-Ttr-129176	Tursiops truncatus	29.46	2.00e-08	54.70
IUUC-Vpa-130336	Vicugna pacos	24.39	2.00e-03	37.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence