iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.80e-11	42.8	151	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekk 73
           ++v+ ++g++  l+ +  dtV++LK+++++++gi p  qr+ ++Gk+L d   L++ +++ + +i ++  +
   Q: 151  LKVRLSTGKDVRLSASLPDTVGQLKRQLHSQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQ 221
           789******9999999999***********************************************98765 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGNCVGRQRR ERPAAPGHPR KRAGRNEPLK KERLKWKSDY PMTDGQLRSK RDEFWDTAPA 60
FEGRKEIWDA LKAAAYAAEA NDHELAQAIL DGASITLPHG TLCECYDELG NRYQLPIYCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGCGGTAC GCACCCTAGG AGAAGCCAAT GAGAAAACCA GGCCCGGCCC GAGGGGCGGT 60
GCCGTCGGTC ACATGCGCAC CTGGGGCGGC TGGCGGCCGT GGCGCGGGCA CCCCGAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032752--UBD
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF16455--UBD
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

KEGG

rno:309373

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001383	Ailuropoda melanoleuca	91.47	3.00e-84	304.00
IUUC-Apl-003196	Anas platyrhynchos	82.78	2.00e-75	274.00
IUUC-Aca-004269	Anolis carolinensis	82.80	1.00e-79	288.00
IUUC-Ame-011592	Astyanax mexicanus	73.98	7.00e-76	276.00
IUUC-Bta-013114	Bos taurus	99.06	2.00e-97	348.00
IUUC-Cja-019457	Callithrix jacchus	98.12	3.00e-98	350.00
IUUC-Cfa-020741	Canis familiaris	99.47	4.00e-83	300.00
IUUC-Cpo-021371	Cavia porcellus	98.12	1.00e-97	348.00
IUUC-Csa-023250	Chlorocebus sabaeus	98.59	6.00e-98	349.00
IUUC-Cin-025159	Ciona intestinalis	52.86	2.00e-57	215.00
IUUC-Cgl-026644	Colletotrichum gloeosporioides	27.64	2.00e-09	56.20
IUUC-Dre-027583	Danio rerio	73.33	6.00e-87	313.00
IUUC-Dno-030068	Dasypus novemcinctus	97.65	1.00e-99	355.00
IUUC-Dor-030232	Dipodomys ordii	98.59	2.00e-97	348.00
IUUC-Eca-033708	Equus caballus	98.12	2.00e-93	335.00
IUUC-Eeu-035163	Erinaceus europaeus	97.88	5.00e-83	300.00
IUUC-Fca-035668	Felis catus	99.53	5.00e-98	350.00
IUUC-Fal-036699	Ficedula albicollis	84.39	3.00e-88	317.00
IUUC-Gmo-039077	Gadus morhua	71.68	1.00e-81	295.00
IUUC-Gga-041047	Gallus gallus	80.63	6.00e-88	316.00
IUUC-Gac-042551	Gasterosteus aculeatus	67.86	4.00e-77	280.00
IUUC-Ggo-044627	Gorilla gorilla	99.06	1.00e-98	352.00
IUUC-Hsa-046628	Homo sapiens	99.06	1.00e-98	352.00
IUUC-Itr-048767	Ictidomys tridecemlineatus	98.95	6.00e-81	293.00
IUUC-Loc-052047	Lepisosteus oculatus	80.20	5.00e-82	296.00
IUUC-Laf-053550	Loxodonta africana	98.59	2.00e-100	358.00
IUUC-Meu-056853	Macropus eugenii	79.31	1.00e-78	285.00
IUUC-Mga-059546	Meleagris gallopavo	80.68	2.00e-34	136.00
IUUC-Mmu-063366	Mus musculus	99.53	6.00e-98	349.00
IUUC-Mpu-066364	Mustela putorius furo	98.12	5.00e-97	346.00
IUUC-Mlu-067342	Myotis lucifugus	98.95	2.00e-84	305.00
IUUC-Nle-069026	Nomascus leucogenys	99.06	1.00e-98	352.00
IUUC-Opr-070485	Ochotona princeps	96.73	7.00e-95	339.00
IUUC-Ont-072182	Oreochromis niloticus	70.98	1.00e-79	289.00
IUUC-Oan-072707	Ornithorhynchus anatinus	84.11	7.00e-87	313.00
IUUC-Ocu-074767	Oryctolagus cuniculus	98.12	3.00e-100	357.00
IUUC-Ola-086457	Oryzias latipes	64.35	2.00e-76	278.00
IUUC-Oga-088568	Otolemur garnettii	98.95	6.00e-83	299.00
IUUC-Oar-090346	Ovis aries	99.47	1.00e-83	301.00
IUUC-Ptr-091385	Pan troglodytes	99.06	1.00e-98	352.00
IUUC-Pan-092096	Papio anubis	98.95	3.00e-84	303.00
IUUC-Pfo-097280	Poecilia formosa	73.30	5.00e-81	293.00
IUUC-Pop-099605	Populus trichocarpa	54.26	2.00e-17	80.10
IUUC-Pca-100398	Procavia capensis	97.18	2.00e-99	354.00
IUUC-Ppe-101177	Prunus persica	51.06	2.00e-16	77.00
IUUC-Pva-103033	Pteropus vampyrus	99.53	5.00e-98	350.00
IUUC-Sha-107383	Sarcophilus harrisii	87.62	9.00e-96	342.00
IUUC-Sar-113655	Sorex araneus	97.35	3.00e-82	297.00
IUUC-Ssc-116443	Sus scrofa	98.12	1.00e-100	358.00
IUUC-Tgu-116742	Taeniopygia guttata	83.26	2.00e-97	347.00
IUUC-Tru-117755	Takifugu rubripes	65.80	5.00e-75	273.00
IUUC-Tni-120518	Tetraodon nigroviridis	73.24	7.00e-82	296.00
IUUC-Tca-121067	Theobroma cacao	45.61	1.00e-16	77.80
IUUC-Tme-127068	Tuber melanosporum	34.10	5.00e-18	84.70
IUUC-Ttr-129064	Tursiops truncatus	97.73	4.00e-99	353.00
IUUC-Vpa-130248	Vicugna pacos	98.34	9.00e-76	275.00
IUUC-Vvi-131279	Vitis vinifera	51.09	3.00e-16	76.60
IUUC-Xtr-131999	Xenopus tropicalis	74.03	2.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence