iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027392

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring finger protein 11b

Genbank Nucleotide ID

CT025878

Gene Name

rnf11b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000040635.6	ENSDART00000098691.4	ENSDARP00000089462.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	36.1	99	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ df   d+ ++lpC H++h+dC+  w       +++f+CP C
   Q: 99   CVICMMDFvyGDPIRFLPCMHIYHLDCIDDW------LMRSFTCPSC 139
           ********99888******************......********** PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MGNCLKSPTS DDISLLHESQ SDRASFGDAN DPDQEPPPPY QEQIHVPVYH PTPSQARLAT 60
QLTEEEQVRI AQRIGLIQHL PKGVYDPGSD GTEKKIRECV ICMMDFVYGD PIRFLPCMHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGACTTAG AATGACTGCC TGAAAGGCAA CATTGCCTGA GTCGCCATTG AGAGCGAGCG 60
CATATTTGAT ATTGTGGAAA TTATCTCCTG GAAGGCTAAC CAGTGTGTTT ACTATTAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

dre:100150568

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001762	Ailuropoda melanoleuca	92.86	2.00e-73	267.00
IUUC-Apl-003879	Anas platyrhynchos	94.69	5.00e-62	228.00
IUUC-Aca-004887	Anolis carolinensis	93.51	4.00e-71	259.00
IUUC-Ame-011194	Astyanax mexicanus	95.45	9.00e-79	285.00
IUUC-Bta-013543	Bos taurus	94.78	3.00e-63	233.00
IUUC-Cel-018152	Caenorhabditis elegans	38.96	5.00e-24	103.00
IUUC-Cja-019172	Callithrix jacchus	93.51	4.00e-71	259.00
IUUC-Cfa-020423	Canis familiaris	94.64	3.00e-61	226.00
IUUC-Cpo-021457	Cavia porcellus	93.51	4.00e-71	259.00
IUUC-Csa-024165	Chlorocebus sabaeus	93.51	4.00e-71	259.00
IUUC-Cho-024439	Choloepus hoffmanni	86.11	1.00e-69	254.00
IUUC-Cin-025246	Ciona intestinalis	79.66	5.00e-25	105.00
IUUC-Dno-029468	Dasypus novemcinctus	94.69	5.00e-62	228.00
IUUC-Dor-030265	Dipodomys ordii	93.51	4.00e-71	259.00
IUUC-Dme-032121	Drosophila melanogaster	51.95	2.00e-40	157.00
IUUC-Ete-032526	Echinops telfairi	93.51	4.00e-71	259.00
IUUC-Eca-033516	Equus caballus	85.91	3.00e-61	226.00
IUUC-Eeu-035261	Erinaceus europaeus	94.69	5.00e-62	228.00
IUUC-Fca-036029	Felis catus	93.51	4.00e-71	259.00
IUUC-Fal-036620	Ficedula albicollis	93.91	6.00e-63	231.00
IUUC-Gmo-038539	Gadus morhua	92.86	2.00e-75	274.00
IUUC-Gga-040240	Gallus gallus	93.51	7.00e-71	259.00
IUUC-Gac-041863	Gasterosteus aculeatus	94.81	7.00e-76	275.00
IUUC-Ggo-045517	Gorilla gorilla	93.51	4.00e-71	259.00
IUUC-Hsa-046313	Homo sapiens	93.51	4.00e-71	259.00
IUUC-Itr-048979	Ictidomys tridecemlineatus	92.86	1.00e-70	258.00
IUUC-Loc-052731	Lepisosteus oculatus	89.17	2.00e-70	258.00
IUUC-Laf-053374	Loxodonta africana	94.74	1.00e-62	230.00
IUUC-Mcc-055336	Macaca mulatta	93.51	4.00e-71	259.00
IUUC-Meu-055960	Macropus eugenii	93.81	1.00e-61	227.00
IUUC-Mla-059167	Melampsora laricipopulina	45.61	1.00e-09	58.50
IUUC-Mga-059363	Meleagris gallopavo	94.69	5.00e-62	228.00
IUUC-Mmr-061456	Microcebus murinus	93.51	2.00e-73	267.00
IUUC-Mdo-062780	Monodelphis domestica	91.11	6.00e-58	216.00
IUUC-Mmu-064330	Mus musculus	92.86	5.00e-74	269.00
IUUC-Mpu-065844	Mustela putorius furo	93.51	4.00e-71	259.00
IUUC-Mlu-067557	Myotis lucifugus	93.51	4.00e-71	259.00
IUUC-Nle-069160	Nomascus leucogenys	94.69	5.00e-62	228.00
IUUC-Opr-070708	Ochotona princeps	87.66	6.00e-67	246.00
IUUC-Ont-071784	Oreochromis niloticus	89.68	3.00e-75	273.00
IUUC-Oan-073071	Ornithorhynchus anatinus	86.82	2.00e-63	234.00
IUUC-Ocu-074236	Oryctolagus cuniculus	93.51	4.00e-71	259.00
IUUC-Oba-075233	Oryza barthii	36.62	1.00e-07	50.10
IUUC-Ola-086848	Oryzias latipes	95.45	7.00e-86	308.00
IUUC-Oga-088630	Otolemur garnettii	68.83	2.00e-57	214.00
IUUC-Oar-089615	Ovis aries	93.51	4.00e-71	259.00
IUUC-Ptr-091459	Pan troglodytes	93.51	4.00e-71	259.00
IUUC-Pan-092848	Papio anubis	93.51	4.00e-71	259.00
IUUC-Psi-092968	Pelodiscus sinensis	93.51	4.00e-71	259.00
IUUC-Pfo-096923	Poecilia formosa	95.45	1.00e-85	308.00
IUUC-Pab-098483	Pongo abelii	93.51	4.00e-71	259.00
IUUC-Pca-100978	Procavia capensis	60.39	2.00e-39	154.00
IUUC-Pva-102550	Pteropus vampyrus	93.51	4.00e-71	259.00
IUUC-Rno-105946	Rattus norvegicus	91.56	6.00e-68	249.00
IUUC-Sha-106723	Sarcophilus harrisii	93.86	3.00e-62	229.00
IUUC-Stu-112368	Solanum tuberosum	47.06	2.00e-13	69.30
IUUC-Sar-113209	Sorex araneus	93.51	4.00e-71	259.00
IUUC-Ssc-115813	Sus scrofa	93.51	4.00e-71	259.00
IUUC-Tgu-117220	Taeniopygia guttata	94.74	1.00e-62	230.00
IUUC-Tru-118754	Takifugu rubripes	94.81	3.00e-77	280.00
IUUC-Tsy-118863	Tarsius syrichta	94.69	5.00e-62	228.00
IUUC-Tni-119702	Tetraodon nigroviridis	94.81	4.00e-77	280.00
IUUC-Tbe-127266	Tupaia belangeri	89.69	9.00e-35	137.00
IUUC-Ttr-128337	Tursiops truncatus	93.51	4.00e-71	259.00
IUUC-Vpa-130786	Vicugna pacos	94.69	5.00e-62	228.00
IUUC-Xtr-132840	Xenopus tropicalis	93.51	3.00e-75	273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence