iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078383

Ensembl Protein ID

OGLUM02G35250.1

UniProt Accession

A0A0D9YZ03; A0A0D9YZ03_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G35250	OGLUM02G35250.1	OGLUM02G35250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-06	29.7	57	118
E3 adaptor/Cullin RING/DCX/DWD	1.10e-27	95.9	557	594
UBD/Beta-Prp	1.10e-40	140.8	381	681

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           ++lCpI + + +d   +++G+++   +I  +l+++   cP ++  lt+ +l Pn  l ++ ++
   Q: 57   DLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSHKSD-CPCCGNYLTKAQLYPNFLLDKVLKK 118
           689*****************************99999.****************988766655 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 557  GHKKAVSYVKFlSTNELASASTDSTLRLWDVKENCPVR 594
           8999*******9889****************9887766 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkgh 93
            + ++++ f +d++l+at++ +++ikv++++t           + ++   + + +++++++ +   v +s+D  +++ vwd++t++ v+ +++h
   Q: 381  ANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNepsdvhcpVVEMATRS-KLSCLSWNKYS-KNVIASSDyeGIVTVWDVQTRQSVMEYEEH 472
           567899**************************5447777666655554444.599****9998.5677777777******************** PP
   S: 94   edsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkl.lrtltgghtdsvy 184
           e++++s++fs++  + lvsGs+d  ++vw ++++     ++   ++ +++v+++p +  +++ Gs+D  +  +dl++ +  ++ + g h+++v 
   Q: 473  EKRAWSVDFSRTEpSMLVSGSDDCKVKVWCTKQEASA--INIDMKANICSVKYNPGSsHYVAVGSADHHIHYFDLRNPSApVHVFGG-HKKAVS 563
           ***********888***************55555555..67777777*********99*****************988752788866.****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.............. 264
            ++f s+ +el+s+s+d+t++lwd++++  vrt++gh++  + v +s n+e++++gs+ + ++++   ++ + k  ++h+              
   Q: 564  YVKFLST-NELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSVNNEYIACGSETNEVFVY---HKAISKPAANHRfvssdlddadddpg 653
           *****96.7*******************99**********************************9...788888888888888999*******9 PP
   S: 265  ssvisvavlsfgdnvlvlgsedskvniw 292
           s +is  +++ + + ++++ + ++++++
   Q: 654  SYFISAVCWKSDSPTMLTANSQGTIKVL 681
           99999999*****************997 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MGDSTVAGAL VPSVPKQEQA PSGDASTAAL AVAGEGEEDA GARASAGGNG EAAADRDLLC 60
PICMAVIKDA FLTACGHSFC YMCIVTHLSH KSDCPCCGNY LTKAQLYPNF LLDKVLKKMS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGACT CGACGGTGGC CGGCGCGCTG GTGCCATCGG TGCCGAAGCA GGAGCAGGCG 60
CCGTCGGGGG ACGCGTCCAC GGCGGCGTTG GCGGTGGCGG GGGAGGGGGA GGAGGATGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0046283--P:anthocyanin-containing compound metabolic process
GO:0006281--P:DNA repair
GO:0009649--P:entrainment of circadian clock
GO:0009640--P:photomorphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0010119--P:regulation of stomatal movement
GO:0009641--P:shade avoidance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	89.27	0.00e+00	1175.00
IUUC-Aml-001265	Ailuropoda melanoleuca	38.83	3.00e-122	431.00
IUUC-Atr-002460	Amborella trichopoda	75.29	0.00e+00	996.00
IUUC-Apl-003796	Anas platyrhynchos	38.52	5.00e-116	410.00
IUUC-Aca-005078	Anolis carolinensis	38.53	5.00e-119	421.00
IUUC-Aly-006014	Arabidopsis lyrata	73.38	0.00e+00	964.00
IUUC-Ath-007636	Arabidopsis thaliana	70.18	0.00e+00	972.00
IUUC-Ame-011176	Astyanax mexicanus	53.72	3.00e-37	149.00
IUUC-Bta-012595	Bos taurus	38.90	1.00e-122	433.00
IUUC-Bdi-014152	Brachypodium distachyon	88.18	0.00e+00	1227.00
IUUC-Bol-016380	Brassica oleracea	69.90	0.00e+00	958.00
IUUC-Bra-017690	Brassica rapa	68.63	0.00e+00	932.00
IUUC-Cja-018926	Callithrix jacchus	38.54	5.00e-122	431.00
IUUC-Cfa-021088	Canis familiaris	38.58	4.00e-123	434.00
IUUC-Cpo-022442	Cavia porcellus	38.47	1.00e-115	409.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	31.50	9.00e-37	146.00
IUUC-Csa-024119	Chlorocebus sabaeus	38.80	6.00e-122	431.00
IUUC-Cho-024883	Choloepus hoffmanni	32.46	2.00e-38	153.00
IUUC-Cin-025375	Ciona intestinalis	39.01	1.00e-116	412.00
IUUC-Cme-027350	Cyanidioschyzon merolae	43.80	2.00e-89	323.00
IUUC-Dre-028453	Danio rerio	48.07	8.00e-104	370.00
IUUC-Dno-029887	Dasypus novemcinctus	38.96	1.00e-122	433.00
IUUC-Dor-031110	Dipodomys ordii	52.13	1.00e-90	327.00
IUUC-Ete-033016	Echinops telfairi	52.13	2.00e-90	326.00
IUUC-Eca-034403	Equus caballus	38.00	3.00e-115	408.00
IUUC-Eeu-034690	Erinaceus europaeus	52.31	3.00e-85	308.00
IUUC-Fca-036475	Felis catus	38.40	3.00e-116	411.00
IUUC-Fal-037189	Ficedula albicollis	39.04	3.00e-122	431.00
IUUC-Gmo-039245	Gadus morhua	46.56	3.00e-102	365.00
IUUC-Gga-040806	Gallus gallus	38.92	1.00e-122	433.00
IUUC-Gac-042177	Gasterosteus aculeatus	38.01	5.00e-120	424.00
IUUC-Gma-044187	Glycine max	74.53	0.00e+00	943.00
IUUC-Ggo-044430	Gorilla gorilla	35.00	5.00e-78	284.00
IUUC-Hsa-045853	Homo sapiens	38.90	1.00e-122	433.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	52.86	2.00e-70	258.00
IUUC-Lch-050420	Latimeria chalumnae	39.81	3.00e-121	428.00
IUUC-Lpe-051219	Leersia perrieri	94.16	0.00e+00	1292.00
IUUC-Loc-052728	Lepisosteus oculatus	39.45	2.00e-114	405.00
IUUC-Laf-053775	Loxodonta africana	39.14	6.00e-123	434.00
IUUC-Meu-056595	Macropus eugenii	38.62	2.00e-56	213.00
IUUC-Mtr-058555	Medicago truncatula	70.68	0.00e+00	967.00
IUUC-Mga-059646	Meleagris gallopavo	38.14	4.00e-116	411.00
IUUC-Mmr-060990	Microcebus murinus	38.83	8.00e-122	430.00
IUUC-Mdo-062287	Monodelphis domestica	38.90	1.00e-122	433.00
IUUC-Mmu-064097	Mus musculus	39.42	1.00e-122	433.00
IUUC-Mac-065240	Musa acuminata	76.93	0.00e+00	1043.00
IUUC-Mpu-066612	Mustela putorius furo	38.52	1.00e-115	409.00
IUUC-Mlu-067967	Myotis lucifugus	38.38	7.00e-114	404.00
IUUC-Nle-069543	Nomascus leucogenys	38.90	2.00e-122	432.00
IUUC-Opr-070366	Ochotona princeps	44.39	4.00e-46	178.00
IUUC-Ont-071522	Oreochromis niloticus	37.17	5.00e-116	411.00
IUUC-Oan-073409	Ornithorhynchus anatinus	38.34	3.00e-114	404.00
IUUC-Ocu-073756	Oryctolagus cuniculus	38.63	2.00e-117	415.00
IUUC-Oba-075149	Oryza barthii	99.71	0.00e+00	1364.00
IUUC-Obr-076563	Oryza brachyantha	98.10	0.00e+00	1297.00
IUUC-Ogl-077701	Oryza glaberrima	100.00	0.00e+00	1370.00
IUUC-Oin-079965	Oryza indica	92.86	0.00e+00	1215.00
IUUC-Olo-080639	Oryza longistaminata	96.77	0.00e+00	1297.00
IUUC-Ome-081821	Oryza meridionalis	99.50	0.00e+00	1231.00
IUUC-Oni-082622	Oryza nivara	100.00	0.00e+00	1370.00
IUUC-Opu-083295	Oryza punctata	97.82	0.00e+00	1360.00
IUUC-Oru-084661	Oryza rufipogon	100.00	0.00e+00	1370.00
IUUC-Osa-085766	Oryza sativa	100.00	0.00e+00	1370.00
IUUC-Ola-086727	Oryzias latipes	37.85	6.00e-123	434.00
IUUC-Olu-087702	Ostreococcus lucimarinus	48.70	3.00e-79	287.00
IUUC-Oga-088215	Otolemur garnettii	38.47	2.00e-117	416.00
IUUC-Oar-089880	Ovis aries	38.47	1.00e-117	416.00
IUUC-Ptr-090597	Pan troglodytes	38.90	1.00e-122	433.00
IUUC-Pan-091987	Papio anubis	38.90	1.00e-122	433.00
IUUC-Psi-094033	Pelodiscus sinensis	39.10	4.00e-118	417.00
IUUC-Pma-094587	Petromyzon marinus	37.78	6.00e-108	384.00
IUUC-Ppa-095401	Physcomitrella patens	62.16	0.00e+00	816.00
IUUC-Pfo-097388	Poecilia formosa	47.33	1.00e-103	370.00
IUUC-Pab-098029	Pongo abelii	38.90	1.00e-122	433.00
IUUC-Pop-099319	Populus trichocarpa	73.19	0.00e+00	947.00
IUUC-Pca-100846	Procavia capensis	46.87	8.00e-103	367.00
IUUC-Ppe-101250	Prunus persica	65.40	0.00e+00	859.00
IUUC-Pva-102407	Pteropus vampyrus	38.74	3.00e-119	422.00
IUUC-Rno-105312	Rattus norvegicus	39.26	2.00e-123	436.00
IUUC-Sha-106514	Sarcophilus harrisii	46.67	2.00e-98	351.00
IUUC-Smo-109418	Selaginella moellendorffii	61.37	0.00e+00	800.00
IUUC-Sit-110248	Setaria italica	89.24	0.00e+00	1249.00
IUUC-Sly-110895	Solanum lycopersicum	70.66	0.00e+00	983.00
IUUC-Stu-112882	Solanum tuberosum	70.84	0.00e+00	895.00
IUUC-Sar-113230	Sorex araneus	43.33	4.00e-67	248.00
IUUC-Sbi-113962	Sorghum bicolor	85.93	0.00e+00	1220.00
IUUC-Ssc-115987	Sus scrofa	26.72	7.00e-25	107.00
IUUC-Tgu-116471	Taeniopygia guttata	38.79	1.00e-121	429.00
IUUC-Tru-118231	Takifugu rubripes	47.45	3.00e-103	369.00
IUUC-Tsy-119415	Tarsius syrichta	38.10	2.00e-114	405.00
IUUC-Tni-120893	Tetraodon nigroviridis	47.45	2.00e-103	369.00
IUUC-Tca-121619	Theobroma cacao	73.15	0.00e+00	965.00
IUUC-Tae-125440	Triticum aestivum	86.91	0.00e+00	1216.00
IUUC-Tur-126557	Triticum urartu	90.54	0.00e+00	1179.00
IUUC-Tbe-127253	Tupaia belangeri	43.61	1.00e-68	253.00
IUUC-Ttr-129100	Tursiops truncatus	38.54	5.00e-114	404.00
IUUC-Vpa-130613	Vicugna pacos	35.13	8.00e-100	357.00
IUUC-Vvi-130880	Vitis vinifera	78.48	0.00e+00	969.00
IUUC-Xtr-132033	Xenopus tropicalis	37.50	2.00e-128	452.00
IUUC-Xma-133421	Xiphophorus maculatus	38.50	9.00e-120	423.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence