iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005963

Ensembl Protein ID

fgenesh2_kg.2__47__AT1G64350.1

UniProt Accession

D7KSB2; D7KSB2_ARALL

Genbank Protein ID

EFH64154.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348714

Gene Name

SEH1H; ARALYDRAFT_474917

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__47__AT1G64350.1	fgenesh2_kg.2__47__AT1G64350.1	fgenesh2_kg.2__47__AT1G64350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-09	38.1	278	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v+ +++  s+ +l+s + Dg +k+W 
   Q: 278  GHQGEVWQMEWdmSGMTLASTGSDGMVKLWQ 308
           8**********987755777777*******5 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAKSMATLDS GTTCSSWNHS GRRLATGSLD GSFSVYDSST SSSSTFTCTS KVRVSESSIV 60
KIVWLPSEYG DAVACICEDG SLSTWEELSE DSHALEWKLC KSIKNKSSQV LDVQFGVSRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAATGGCG AAATCAATGG CGACGCTAGA TTCTGGCACC ACATGTTCCT CCTGGAATCA 60
CTCCGGCCGC CGATTAGCCA CCGGATCCCT CGACGGAAGC TTTTCCGTAT ACGACTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

KEGG

aly:ARALYDRAFT_474917

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	68.16	2.00e-81	293.00
IUUC-Aca-004378	Anolis carolinensis	26.24	2.00e-23	102.00
IUUC-Ath-007107	Arabidopsis thaliana	95.09	7.00e-175	605.00
IUUC-Bdi-014594	Brachypodium distachyon	59.38	4.00e-112	397.00
IUUC-Bol-016565	Brassica oleracea	86.77	8.00e-161	558.00
IUUC-Bra-017831	Brassica rapa	88.00	4.00e-163	566.00
IUUC-Eca-033425	Equus caballus	25.18	1.00e-22	99.80
IUUC-Gma-044300	Glycine max	68.92	2.00e-131	461.00
IUUC-Hvu-047455	Hordeum vulgare	58.12	2.00e-110	390.00
IUUC-Lpe-051064	Leersia perrieri	59.06	9.00e-113	399.00
IUUC-Meu-055958	Macropus eugenii	25.00	4.00e-16	78.20
IUUC-Mtr-057876	Medicago truncatula	65.14	3.00e-126	443.00
IUUC-Mla-058820	Melampsora laricipopulina	24.75	5.00e-13	67.80
IUUC-Mac-064960	Musa acuminata	59.57	7.00e-106	376.00
IUUC-Opr-070773	Ochotona princeps	22.22	1.00e-07	50.10
IUUC-Oba-075325	Oryza barthii	54.69	4.00e-101	360.00
IUUC-Obr-076089	Oryza brachyantha	56.25	9.00e-108	382.00
IUUC-Ogl-077279	Oryza glaberrima	57.81	6.00e-111	393.00
IUUC-Ogu-078901	Oryza glumaepatula	54.69	2.00e-101	360.00
IUUC-Oin-079385	Oryza indica	55.16	4.00e-109	387.00
IUUC-Ome-081809	Oryza meridionalis	60.74	3.00e-102	365.00
IUUC-Oni-082185	Oryza nivara	53.12	2.00e-96	344.00
IUUC-Opu-083324	Oryza punctata	56.25	3.00e-104	370.00
IUUC-Oru-084801	Oryza rufipogon	58.12	1.00e-111	395.00
IUUC-Osa-085790	Oryza sativa	57.81	6.00e-111	393.00
IUUC-Olu-087855	Ostreococcus lucimarinus	25.18	6.00e-11	60.80
IUUC-Ppa-095228	Physcomitrella patens	42.75	1.00e-67	248.00
IUUC-Pop-099015	Populus trichocarpa	68.11	7.00e-130	456.00
IUUC-Ppe-101303	Prunus persica	67.08	3.00e-130	457.00
IUUC-Smo-109282	Selaginella moellendorffii	42.90	3.00e-69	254.00
IUUC-Sit-110393	Setaria italica	58.75	2.00e-110	391.00
IUUC-Sly-111125	Solanum lycopersicum	67.18	2.00e-125	440.00
IUUC-Stu-112745	Solanum tuberosum	60.94	3.00e-123	434.00
IUUC-Sbi-114110	Sorghum bicolor	57.81	5.00e-110	389.00
IUUC-Tca-120999	Theobroma cacao	61.05	7.00e-119	421.00
IUUC-Tae-122796	Triticum aestivum	59.43	2.00e-112	397.00
IUUC-Tur-126582	Triticum urartu	58.63	8.00e-99	353.00
IUUC-Tbe-127344	Tupaia belangeri	23.79	1.00e-14	73.90
IUUC-Vpa-130656	Vicugna pacos	25.18	2.00e-22	99.00
IUUC-Vvi-131103	Vitis vinifera	69.14	4.00e-133	466.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence