iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048447

Ensembl Protein ID

ENSSTOP00000016634.1

UniProt Accession

I3MWY9; I3MWY9_ICTTR

Genbank Protein ID

ENSSTOP00000016634

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01118781

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000028522.1	ENSSTOT00000028204.1	ENSSTOP00000016634.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-06	26.5	630	671

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +d+   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 630  CSVCISDYvtGNKLRQLPCMHEFHIHCIDRW------LSENCTCPICR 671
           9*******7744499****************......**********8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MNQSRSRSGD GGEETSSQDH NHRENERRWQ QERLHREEAY YQFINELNDE DYRLMRDHNL 60
LGTPGEITSE ELQQRLDGVK EQLATQPDLR NGTNNRDSEV PRESSNEDSL LEWLNTFRRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTGGAGGC GGGGGCGGCG GTGGAGACAG AAGAATCTTG GAAGTTTCAA AACAAAGTCC 60
AAATACAAAC ACTTTAGAAT TTATTAGGAT TCGTAATTTC CAGGTCCTAG AGAGCAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	37.29	2.00e-08	51.20
IUUC-Aml-001415	Ailuropoda melanoleuca	89.75	0.00e+00	1089.00
IUUC-Atr-002558	Amborella trichopoda	32.73	4.00e-14	72.40
IUUC-Apl-003834	Anas platyrhynchos	59.83	0.00e+00	662.00
IUUC-Aca-004373	Anolis carolinensis	59.72	2.00e-88	319.00
IUUC-Ame-011730	Astyanax mexicanus	64.36	3.00e-89	322.00
IUUC-Bta-012763	Bos taurus	74.12	0.00e+00	897.00
IUUC-Bol-015610	Brassica oleracea	38.64	2.00e-15	76.30
IUUC-Bra-017280	Brassica rapa	44.44	9.00e-16	76.60
IUUC-Cja-018980	Callithrix jacchus	87.01	0.00e+00	1087.00
IUUC-Cfa-020416	Canis familiaris	89.77	0.00e+00	1105.00
IUUC-Cpo-022086	Cavia porcellus	75.26	0.00e+00	835.00
IUUC-Csa-023246	Chlorocebus sabaeus	88.91	0.00e+00	1092.00
IUUC-Cho-024749	Choloepus hoffmanni	83.41	0.00e+00	884.00
IUUC-Dre-028428	Danio rerio	63.92	2.00e-88	320.00
IUUC-Dno-029617	Dasypus novemcinctus	85.57	0.00e+00	1025.00
IUUC-Dor-030800	Dipodomys ordii	83.99	4.00e-143	501.00
IUUC-Ete-032882	Echinops telfairi	75.17	4.00e-161	561.00
IUUC-Eca-033892	Equus caballus	88.14	0.00e+00	1114.00
IUUC-Eeu-034563	Erinaceus europaeus	85.88	3.00e-116	412.00
IUUC-Fca-035765	Felis catus	87.85	0.00e+00	1064.00
IUUC-Fal-036981	Ficedula albicollis	57.66	1.00e-175	609.00
IUUC-Gmo-039344	Gadus morhua	61.81	8.00e-97	347.00
IUUC-Gga-041114	Gallus gallus	72.05	3.00e-117	415.00
IUUC-Gac-042220	Gasterosteus aculeatus	63.67	1.00e-98	353.00
IUUC-Ggo-044902	Gorilla gorilla	88.91	0.00e+00	1146.00
IUUC-Hsa-046548	Homo sapiens	88.91	0.00e+00	1145.00
IUUC-Lch-050541	Latimeria chalumnae	63.05	1.00e-100	360.00
IUUC-Lpe-051237	Leersia perrieri	44.00	5.00e-14	70.90
IUUC-Laf-054296	Loxodonta africana	81.82	0.00e+00	983.00
IUUC-Mcc-054858	Macaca mulatta	88.91	0.00e+00	1110.00
IUUC-Meu-056296	Macropus eugenii	66.15	3.00e-136	478.00
IUUC-Mga-059307	Meleagris gallopavo	70.47	5.00e-111	394.00
IUUC-Mmr-060699	Microcebus murinus	89.75	0.00e+00	1122.00
IUUC-Mdo-062162	Monodelphis domestica	68.70	0.00e+00	751.00
IUUC-Mmu-064188	Mus musculus	72.36	0.00e+00	820.00
IUUC-Mpu-065891	Mustela putorius furo	88.58	0.00e+00	1084.00
IUUC-Mlu-067177	Myotis lucifugus	87.06	0.00e+00	1017.00
IUUC-Nle-069127	Nomascus leucogenys	88.61	0.00e+00	1139.00
IUUC-Ont-072086	Oreochromis niloticus	62.54	4.00e-99	355.00
IUUC-Ocu-074281	Oryctolagus cuniculus	91.91	2.00e-70	257.00
IUUC-Oba-075544	Oryza barthii	42.25	9.00e-14	69.30
IUUC-Ogl-077537	Oryza glaberrima	42.25	9.00e-14	69.30
IUUC-Oin-079706	Oryza indica	44.00	1.00e-13	69.70
IUUC-Olo-080832	Oryza longistaminata	44.00	1.00e-13	69.70
IUUC-Ome-081556	Oryza meridionalis	38.68	2.00e-15	75.50
IUUC-Oni-082676	Oryza nivara	42.25	9.00e-14	69.30
IUUC-Opu-084125	Oryza punctata	50.94	2.00e-13	69.70
IUUC-Oru-084552	Oryza rufipogon	44.00	1.00e-13	69.70
IUUC-Osa-085950	Oryza sativa	44.00	1.00e-13	69.70
IUUC-Ola-087452	Oryzias latipes	63.12	2.00e-99	356.00
IUUC-Oga-088750	Otolemur garnettii	89.44	0.00e+00	1104.00
IUUC-Oar-089523	Ovis aries	74.27	0.00e+00	879.00
IUUC-Ptr-091533	Pan troglodytes	88.76	0.00e+00	1141.00
IUUC-Pan-092675	Papio anubis	88.47	0.00e+00	1075.00
IUUC-Psi-093735	Pelodiscus sinensis	60.86	0.00e+00	692.00
IUUC-Pfo-096637	Poecilia formosa	61.00	5.00e-98	351.00
IUUC-Pab-098486	Pongo abelii	89.05	0.00e+00	1148.00
IUUC-Pop-099068	Populus trichocarpa	43.66	5.00e-15	73.20
IUUC-Pca-100143	Procavia capensis	80.96	4.00e-174	604.00
IUUC-Pva-103151	Pteropus vampyrus	80.82	0.00e+00	1009.00
IUUC-Pgr-103322	Puccinia graminis	35.59	2.00e-09	56.20
IUUC-Rno-105745	Rattus norvegicus	70.74	0.00e+00	775.00
IUUC-Sha-106681	Sarcophilus harrisii	68.64	0.00e+00	754.00
IUUC-Sit-110544	Setaria italica	39.19	1.00e-13	70.90
IUUC-Sar-113229	Sorex araneus	86.53	6.00e-140	491.00
IUUC-Sbi-114427	Sorghum bicolor	40.48	7.00e-14	71.20
IUUC-Ssc-115345	Sus scrofa	59.81	7.00e-81	294.00
IUUC-Tgu-117477	Taeniopygia guttata	56.62	2.00e-166	578.00
IUUC-Tru-118123	Takifugu rubripes	51.72	1.00e-57	217.00
IUUC-Tsy-119338	Tarsius syrichta	72.95	0.00e+00	837.00
IUUC-Tni-119675	Tetraodon nigroviridis	58.19	6.00e-84	304.00
IUUC-Tca-120922	Theobroma cacao	50.00	4.00e-14	72.00
IUUC-Tur-125977	Triticum urartu	38.71	6.00e-14	71.20
IUUC-Tbe-127505	Tupaia belangeri	69.44	1.00e-106	380.00
IUUC-Ttr-128367	Tursiops truncatus	79.45	0.00e+00	849.00
IUUC-Vpa-130480	Vicugna pacos	84.40	2.00e-144	505.00
IUUC-Xma-133863	Xiphophorus maculatus	62.88	1.00e-98	353.00
IUUC-Yli-134656	Yarrowia lipolytica	46.43	4.00e-11	62.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence