iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076718

Ensembl Protein ID

OB07G17940.1

UniProt Accession

J3MK62; J3MK62_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB07G17940	OB07G17940.1	OB07G17940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-49	164.1	481	520
UBD/Beta-Prp	5.00e-66	223.6	351	553

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  +v+++af ++  +l+sGs D  +++W++++g+ lk+
   Q: 481  GHRQPVYSVAFsPGgEYLASGSLDQCLHIWSVKEGRILKT 520
           8***********889********************99875 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.... 104
           +  +v++ ++++ +at s+d++i v ++ ++  ++s+sgh++ev+a+k++p+g++l+++s+D t+k+w++++ kcv+ +k+h+++++++++sp    
   Q: 351  PTLDVDW-RNNNSFATCSTDNMIYVCKIGDQRPVKSFSGHQSEVNAIKWDPTGSLLASCSDDWTAKIWSMKQDKCVYDFKEHTKEIYTIRWSPtgpg 446
           5556777.77888********************************************************************************8888 PP
   S: 105  .....sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelv 196
                ++  l+s+s d+ti++w++e+g  l+  l+gh++ v +v+++p g +l+sGslD+++ +W++k g++l+t +g   + +  + ++++g  ++
   Q: 447  tnnpnQQLLLASASFDSTIKLWEVEQGRLLY-SLAGHRQPVYSVAFSPGGEYLASGSLDQCLHIWSVKEGRILKTYRG--SGGIFEVCWNKEGSKIA 540
           87763336899********************.****************99**************************99..9**************** PP
   S: 197  sgsldgtvklwdl 209
           ++  ++tv + d+
   Q: 541  ACFSNNTVCIMDF 553
           ********99887 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGAITSAELN FLIFRYLQES GFVHAAFTLG YEAGIHKGGI DGNLIPPGAL ITIVQKGLQY 60
IELEANTDEN DEDIAKDFAL LEPLEIITKN VEELQQIVKK RKREKFQSDR DKDKGKEKER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCGTTCC GTACGTGTTC CCTGTTTTCT AGCTTCTATG GGGGCAATCA CCTCGGCCGA 60
GCTCAACTTC CTCATCTTCC GCTACCTCCA GGAGTCCGGT TCGCGCCCTC TCGATTCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016575--P:histone deacetylation
GO:0009409--P:response to cold

KEGG

obr:102715594

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	92.96	2.00e-79	286.00
IUUC-Aml-001717	Ailuropoda melanoleuca	50.45	1.00e-152	531.00
IUUC-Atr-002514	Amborella trichopoda	80.43	0.00e+00	639.00
IUUC-Apl-003708	Anas platyrhynchos	62.91	1.00e-133	468.00
IUUC-Aca-004611	Anolis carolinensis	51.08	1.00e-152	531.00
IUUC-Aly-005622	Arabidopsis lyrata	67.99	3.00e-156	544.00
IUUC-Ath-007137	Arabidopsis thaliana	68.40	5.00e-155	540.00
IUUC-Ame-011601	Astyanax mexicanus	63.39	9.00e-136	476.00
IUUC-Bta-012418	Bos taurus	50.27	1.00e-159	555.00
IUUC-Bdi-014315	Brachypodium distachyon	89.41	0.00e+00	948.00
IUUC-Bol-016277	Brassica oleracea	68.61	4.00e-159	553.00
IUUC-Bra-016944	Brassica rapa	68.35	2.00e-158	551.00
IUUC-Cja-018832	Callithrix jacchus	50.63	1.00e-152	531.00
IUUC-Cfa-020029	Canis familiaris	50.45	1.00e-152	531.00
IUUC-Cpo-021682	Cavia porcellus	61.66	4.00e-141	493.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	60.11	2.00e-128	451.00
IUUC-Csa-024075	Chlorocebus sabaeus	50.63	1.00e-152	531.00
IUUC-Cin-025704	Ciona intestinalis	48.14	6.00e-156	543.00
IUUC-Csv-026257	Ciona savignyi	49.28	5.00e-153	533.00
IUUC-Cme-027258	Cyanidioschyzon merolae	38.40	3.00e-109	388.00
IUUC-Dre-027906	Danio rerio	62.57	7.00e-135	473.00
IUUC-Dno-029196	Dasypus novemcinctus	50.63	5.00e-153	533.00
IUUC-Dor-030732	Dipodomys ordii	62.30	6.00e-130	456.00
IUUC-Dme-031939	Drosophila melanogaster	58.56	3.00e-125	441.00
IUUC-Ete-033150	Echinops telfairi	62.84	1.00e-118	419.00
IUUC-Eca-033897	Equus caballus	50.63	5.00e-162	563.00
IUUC-Eeu-034952	Erinaceus europaeus	46.28	2.00e-131	461.00
IUUC-Fca-035734	Felis catus	50.63	5.00e-153	533.00
IUUC-Fal-037185	Ficedula albicollis	62.91	1.00e-133	469.00
IUUC-Gmo-038870	Gadus morhua	50.63	6.00e-159	553.00
IUUC-Gga-041161	Gallus gallus	62.91	9.00e-134	469.00
IUUC-Gac-041844	Gasterosteus aculeatus	62.91	5.00e-142	496.00
IUUC-Gma-042796	Glycine max	63.99	0.00e+00	720.00
IUUC-Ggo-044882	Gorilla gorilla	50.63	1.00e-152	531.00
IUUC-Hsa-046488	Homo sapiens	50.63	1.00e-152	531.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	62.91	7.00e-133	465.00
IUUC-Lch-050672	Latimeria chalumnae	50.45	2.00e-153	534.00
IUUC-Lpe-051084	Leersia perrieri	96.22	0.00e+00	973.00
IUUC-Loc-052030	Lepisosteus oculatus	63.46	2.00e-143	501.00
IUUC-Laf-054280	Loxodonta africana	50.45	7.00e-161	559.00
IUUC-Mcc-055203	Macaca mulatta	50.63	1.00e-152	531.00
IUUC-Meu-056563	Macropus eugenii	69.20	2.00e-95	342.00
IUUC-Mtr-058624	Medicago truncatula	62.16	0.00e+00	717.00
IUUC-Mga-059660	Meleagris gallopavo	62.91	9.00e-134	469.00
IUUC-Mvi-060557	Microbotryum violaceum	34.36	2.00e-69	256.00
IUUC-Mmr-060925	Microcebus murinus	49.72	4.00e-144	503.00
IUUC-Mdo-062078	Monodelphis domestica	50.63	2.00e-152	531.00
IUUC-Mmu-063603	Mus musculus	50.99	1.00e-154	538.00
IUUC-Mac-065508	Musa acuminata	70.54	3.00e-173	600.00
IUUC-Mpu-066741	Mustela putorius furo	50.45	1.00e-152	531.00
IUUC-Mlu-068152	Myotis lucifugus	50.54	1.00e-152	531.00
IUUC-Nle-069229	Nomascus leucogenys	50.63	1.00e-152	531.00
IUUC-Opr-070277	Ochotona princeps	43.72	6.00e-118	416.00
IUUC-Ont-071569	Oreochromis niloticus	50.99	9.00e-164	568.00
IUUC-Oan-073562	Ornithorhynchus anatinus	50.63	5.00e-162	563.00
IUUC-Ocu-074280	Oryctolagus cuniculus	51.17	5.00e-155	540.00
IUUC-Oba-075618	Oryza barthii	92.07	0.00e+00	968.00
IUUC-Ogl-077302	Oryza glaberrima	95.32	0.00e+00	1019.00
IUUC-Ogu-078718	Oryza glumaepatula	95.50	0.00e+00	1020.00
IUUC-Oin-079515	Oryza indica	88.66	0.00e+00	728.00
IUUC-Olo-080427	Oryza longistaminata	86.09	0.00e+00	896.00
IUUC-Ome-081696	Oryza meridionalis	94.05	0.00e+00	998.00
IUUC-Oni-082137	Oryza nivara	95.50	0.00e+00	1020.00
IUUC-Opu-083505	Oryza punctata	91.53	0.00e+00	969.00
IUUC-Oru-085276	Oryza rufipogon	95.32	0.00e+00	1018.00
IUUC-Osa-085791	Oryza sativa	95.50	0.00e+00	1020.00
IUUC-Ola-087365	Oryzias latipes	62.36	7.00e-141	493.00
IUUC-Olu-087589	Ostreococcus lucimarinus	66.22	2.00e-150	524.00
IUUC-Oga-088357	Otolemur garnettii	60.16	2.00e-123	434.00
IUUC-Oar-089214	Ovis aries	50.45	1.00e-160	558.00
IUUC-Ptr-091532	Pan troglodytes	50.63	1.00e-152	531.00
IUUC-Pan-091927	Papio anubis	50.63	1.00e-152	531.00
IUUC-Psi-093358	Pelodiscus sinensis	49.46	8.00e-153	532.00
IUUC-Pma-094105	Petromyzon marinus	61.65	5.00e-41	160.00
IUUC-Ppa-095868	Physcomitrella patens	76.94	1.00e-172	598.00
IUUC-Pfo-096158	Poecilia formosa	62.36	2.00e-141	494.00
IUUC-Pab-098705	Pongo abelii	50.63	1.00e-152	531.00
IUUC-Pop-098989	Populus trichocarpa	77.51	2.00e-170	590.00
IUUC-Pca-100256	Procavia capensis	50.64	5.00e-150	523.00
IUUC-Ppe-101572	Prunus persica	67.62	0.00e+00	677.00
IUUC-Pva-102616	Pteropus vampyrus	50.09	2.00e-149	521.00
IUUC-Rno-105411	Rattus norvegicus	50.81	5.00e-154	536.00
IUUC-Sce-106132	Saccharomyces cerevisiae	24.41	4.00e-39	154.00
IUUC-Sha-106636	Sarcophilus harrisii	60.89	2.00e-133	468.00
IUUC-Sja-107844	Schizosaccharomyces japonicus	25.48	3.00e-30	125.00
IUUC-Smo-109301	Selaginella moellendorffii	77.90	6.00e-174	602.00
IUUC-Sit-110710	Setaria italica	88.69	0.00e+00	917.00
IUUC-Sly-111336	Solanum lycopersicum	78.18	1.00e-176	612.00
IUUC-Stu-112786	Solanum tuberosum	59.02	0.00e+00	659.00
IUUC-Sar-112971	Sorex araneus	45.11	3.00e-134	471.00
IUUC-Sbi-114420	Sorghum bicolor	86.81	0.00e+00	938.00
IUUC-Sre-115175	Sporisorium reilianum	43.48	4.00e-58	219.00
IUUC-Ssc-115695	Sus scrofa	50.00	2.00e-148	518.00
IUUC-Tgu-116898	Taeniopygia guttata	50.09	1.00e-159	555.00
IUUC-Tru-118254	Takifugu rubripes	50.99	4.00e-162	563.00
IUUC-Tsy-119424	Tarsius syrichta	42.34	3.00e-112	397.00
IUUC-Tni-120861	Tetraodon nigroviridis	51.26	4.00e-162	563.00
IUUC-Tca-121739	Theobroma cacao	68.75	9.00e-171	592.00
IUUC-Tae-125368	Triticum aestivum	88.75	0.00e+00	946.00
IUUC-Tur-126856	Triticum urartu	83.29	2.00e-170	591.00
IUUC-Tme-127126	Tuber melanosporum	33.83	5.00e-48	184.00
IUUC-Tbe-127767	Tupaia belangeri	65.08	1.00e-119	421.00
IUUC-Ttr-128826	Tursiops truncatus	50.00	1.00e-143	502.00
IUUC-Uma-129469	Ustilago maydis	43.87	1.00e-58	220.00
IUUC-Vpa-130768	Vicugna pacos	50.64	7.00e-150	523.00
IUUC-Vvi-131193	Vitis vinifera	78.31	6.00e-174	603.00
IUUC-Xtr-132842	Xenopus tropicalis	48.74	1.00e-145	508.00
IUUC-Xma-134168	Xiphophorus maculatus	50.72	4.00e-164	570.00
IUUC-Yli-134648	Yarrowia lipolytica	28.57	1.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence