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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-006671
UUCD1 version UUC-ArT-00326
Ensembl Protein ID AT2G26060.1
UniProt Accession O80990; F4ITL5; CIA1_ARATH
Genbank Protein ID AAC31230.2; AEC07790.1; AEC07791.1; AAM13153.1; AAO30057.1; AAM62509.1
Protein Name Protein CIA1; Cytosolic iron-sulfur protein assembly 1; Protein EMBRYO DEFECTIVE 1345
Genbank Nucleotide ID AC004747; CP002685; CP002685; AY093154; BT003394; AY085277
Gene Name CIA1; EMB1345; At2g26060; T19L18.13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G26060 AT2G26060.1 AT2G26060.1
AT2G26060 AT2G26060.2 AT2G26060.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.70e-44 146.3 18 55
UBD/Beta-Prp 5.50e-49 167.8 67 350
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..........sdtllvsGsdDgtikvWD 29
    gHtd+v+++a+ s ++l+s+s+D+t+++W+
   Q: 18 GHTDRVWSVAWnpvsshadgvS-PILASCSGDNTVRIWE 55
    8*************99986532.99*************8 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvhtlkghed 95
    ++l+++h+ +++ ++sp+++llat+s dgt+ +w++ + +++l+ghe+ev++v+++ +g+ l+t+s+D+ + +w + + ++c +l+gh++
   Q: 67 TVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFecISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWevlEGNEYDCAAVLTGHTQ 164
    678999*******************************9998888***********************************655566************* PP
   S: 96 svlslsfspsgdklvsGshdrtirvw....dletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.........ktgkllrtl.. 175
    +v ++++p+ d+l s s d+ti+vw d ++qc+++ ++gh+++v++++++ g+ +v++s+D t+++W +
   Q: 165 DVKMVQWHPTMDVLFSCSYDNTIKVWwsedDDGEYQCVQTlgeSNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTdiakmqsgeE-------Yap 255
    *************************845555567788888************************************777777644442.......233 PP
   S: 176 .......tgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgec........vrtlnghtdnvksvrfs..pnderlvsgssDgsiriWdlrs 253
    +g+h++ +ys ++++ ++sg+ d+ ++l+ + + ++ +++ ++h++ v+sv+ s + + +l+s+s+Dg ++iW l +
   Q: 256 wihlctlSGYHDRTIYSAHWSRD-DIIASGAGDNAIRLFVDSkHDSVdgpsynllLKKNKAHENDVNSVQWSpgEGNRLLASASDDGMVKIWQLAT 350
    3555666***************8.6************986664444477777777*****************888999**************8766 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Essential component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe/S proteins.
Essential component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe/S proteins.
Protein Sequence
(Fasta)
MDLMEKNLEL VEIQKLEGHT DRVWSVAWNP VSSHADGVSP ILASCSGDNT VRIWEQSSLS 60
RSWTCKTVLE ETHTRTVRSC AWSPSGQLLA TASFDGTTGI WKNYGSEFEC ISTLEGHENE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006671|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAAACCCAGA CCCAAACCCA TGCCCATACA CAAATCACGA ATGCCTAGGC TTACTTGTGA 60
CCGAAACCGA ATTGAATCAT ATATAGTTTC AGGTCACCTG TTGCACAATC TCTGCTCAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006671|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR028608--CIAO1/Cia1
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0097361--C:CIA complex
GO:0005634--C:nucleus
GO:0016226--P:iron-sulfur cluster assembly

KEGG ath:AT2G26060
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000874 Aegilops tauschii 66.04 9.00e-101 360.00
IUUC-Aml-001317 Ailuropoda melanoleuca 48.26 9.00e-76 276.00
IUUC-Atr-003029 Amborella trichopoda 66.76 5.00e-136 476.00
IUUC-Aly-006458 Arabidopsis lyrata 98.30 0.00e+00 709.00
IUUC-Ago-007820 Ashbya gossypii 38.24 5.00e-54 203.00
IUUC-Acl-008042 Aspergillus clavatus 28.67 7.00e-42 164.00
IUUC-Afl-008639 Aspergillus flavus 30.60 8.00e-41 160.00
IUUC-Afu-008899 Aspergillus fumigatus 28.63 9.00e-40 157.00
IUUC-Ani-009453 Aspergillus nidulans 29.82 2.00e-39 155.00
IUUC-Ang-009758 Aspergillus niger 30.95 6.00e-38 150.00
IUUC-Aor-010212 Aspergillus oryzae 30.60 8.00e-41 160.00
IUUC-Ate-010314 Aspergillus terreus 30.95 5.00e-43 167.00
IUUC-Ame-010676 Astyanax mexicanus 48.15 1.00e-84 305.00
IUUC-Bgr-012095 Blumeria graminis 28.20 9.00e-30 124.00
IUUC-Bta-012884 Bos taurus 48.99 3.00e-76 277.00
IUUC-Bdi-014614 Brachypodium distachyon 65.12 1.00e-126 445.00
IUUC-Bol-016439 Brassica oleracea 84.46 2.00e-166 577.00
IUUC-Bra-016830 Brassica rapa 84.70 1.00e-167 581.00
IUUC-Cel-018709 Caenorhabditis elegans 39.58 2.00e-54 204.00
IUUC-Cja-019822 Callithrix jacchus 47.67 1.00e-75 275.00
IUUC-Cfa-020823 Canis familiaris 48.26 5.00e-76 276.00
IUUC-Cre-022811 Chlamydomonas reinhardtii 43.85 6.00e-78 283.00
IUUC-Csa-023754 Chlorocebus sabaeus 48.41 3.00e-76 277.00
IUUC-Cin-025395 Ciona intestinalis 44.15 3.00e-76 277.00
IUUC-Csv-025943 Ciona savignyi 43.57 9.00e-75 273.00
IUUC-Cne-026939 Cryptococcus neoformans 32.10 6.00e-43 167.00
IUUC-Cme-027239 Cyanidioschyzon merolae 36.36 3.00e-38 152.00
IUUC-Dre-028172 Danio rerio 48.27 2.00e-83 301.00
IUUC-Dno-029472 Dasypus novemcinctus 50.51 2.00e-68 251.00
IUUC-Dor-031134 Dipodomys ordii 41.57 2.00e-58 218.00
IUUC-Dse-031535 Dothistroma septosporum 27.32 4.00e-34 138.00
IUUC-Dme-032020 Drosophila melanogaster 48.12 2.00e-88 318.00
IUUC-Eca-033700 Equus caballus 48.70 5.00e-76 276.00
IUUC-Eeu-035010 Erinaceus europaeus 46.22 3.00e-70 258.00
IUUC-Fca-036309 Felis catus 43.19 4.00e-69 253.00
IUUC-Fal-037243 Ficedula albicollis 51.14 2.00e-52 197.00
IUUC-Gmo-039375 Gadus morhua 47.06 3.00e-76 277.00
IUUC-Ggr-040002 Gaeumannomyces graminis 32.78 5.00e-36 144.00
IUUC-Gga-040294 Gallus gallus 49.66 6.00e-62 230.00
IUUC-Gac-042499 Gasterosteus aculeatus 47.81 2.00e-74 272.00
IUUC-Gma-043543 Glycine max 70.85 4.00e-147 513.00
IUUC-Ggo-045181 Gorilla gorilla 48.41 3.00e-76 277.00
IUUC-Hsa-046528 Homo sapiens 48.41 3.00e-76 277.00
IUUC-Hvu-047341 Hordeum vulgare 64.36 4.00e-73 266.00
IUUC-Itr-048790 Ictidomys tridecemlineatus 48.41 2.00e-76 278.00
IUUC-Kpa-049353 Komagataella pastoris 33.06 6.00e-46 177.00
IUUC-Lch-049763 Latimeria chalumnae 50.14 1.00e-81 296.00
IUUC-Lpe-051500 Leersia perrieri 57.94 1.00e-118 419.00
IUUC-Loc-052021 Lepisosteus oculatus 47.61 5.00e-74 270.00
IUUC-Lma-053331 Leptosphaeria maculans 30.75 2.00e-39 157.00
IUUC-Laf-054558 Loxodonta africana 47.97 6.00e-75 273.00
IUUC-Mcc-055374 Macaca mulatta 47.97 3.00e-76 278.00
IUUC-Meu-056042 Macropus eugenii 56.74 4.00e-54 204.00
IUUC-Mor-057187 Magnaporthe oryzae 31.24 2.00e-38 152.00
IUUC-Mtr-058072 Medicago truncatula 71.18 2.00e-146 510.00
IUUC-Mla-059108 Melampsora laricipopulina 34.52 5.00e-58 218.00
IUUC-Mga-059370 Meleagris gallopavo 42.35 1.00e-42 166.00
IUUC-Mvi-060495 Microbotryum violaceum 32.66 4.00e-56 211.00
IUUC-Mmr-060902 Microcebus murinus 48.26 1.00e-76 279.00
IUUC-Mdo-062510 Monodelphis domestica 47.67 1.00e-73 269.00
IUUC-Mmu-063575 Mus musculus 48.70 2.00e-75 275.00
IUUC-Mac-065322 Musa acuminata 68.57 2.00e-138 484.00
IUUC-Mpu-065925 Mustela putorius furo 48.26 2.00e-76 278.00
IUUC-Mlu-067755 Myotis lucifugus 48.12 1.00e-74 272.00
IUUC-Nfi-068327 Neosartorya fischeri 29.48 2.00e-39 156.00
IUUC-Ncr-068845 Neurospora crassa 28.11 3.00e-27 115.00
IUUC-Nle-069406 Nomascus leucogenys 47.54 2.00e-73 268.00
IUUC-Opr-070416 Ochotona princeps 56.55 8.00e-40 156.00
IUUC-Ont-071936 Oreochromis niloticus 48.99 1.00e-76 278.00
IUUC-Oan-073452 Ornithorhynchus anatinus 52.05 9.00e-36 142.00
IUUC-Ocu-074791 Oryctolagus cuniculus 48.26 5.00e-76 277.00
IUUC-Oba-075636 Oryza barthii 64.62 4.00e-126 443.00
IUUC-Obr-076742 Oryza brachyantha 66.20 3.00e-108 383.00
IUUC-Ogl-077766 Oryza glaberrima 64.62 4.00e-126 443.00
IUUC-Ogu-079039 Oryza glumaepatula 64.33 5.00e-125 439.00
IUUC-Oin-079315 Oryza indica 66.55 7.00e-111 392.00
IUUC-Olo-080669 Oryza longistaminata 56.04 2.00e-117 415.00
IUUC-Ome-081490 Oryza meridionalis 64.72 7.00e-127 446.00
IUUC-Oni-082572 Oryza nivara 64.62 4.00e-126 443.00
IUUC-Opu-083732 Oryza punctata 65.01 8.00e-127 445.00
IUUC-Oru-084763 Oryza rufipogon 64.62 4.00e-126 443.00
IUUC-Osa-085372 Oryza sativa 64.62 4.00e-126 443.00
IUUC-Ola-087379 Oryzias latipes 48.31 1.00e-75 275.00
IUUC-Olu-087801 Ostreococcus lucimarinus 40.70 1.00e-56 213.00
IUUC-Oga-089076 Otolemur garnettii 48.12 5.00e-76 277.00
IUUC-Oar-090022 Ovis aries 48.99 2.00e-76 278.00
IUUC-Ptr-090809 Pan troglodytes 48.41 3.00e-76 277.00
IUUC-Pan-091685 Papio anubis 48.41 5.00e-77 281.00
IUUC-Psi-093046 Pelodiscus sinensis 47.97 1.00e-75 276.00
IUUC-Pma-094181 Petromyzon marinus 46.76 3.00e-82 297.00
IUUC-Pno-094882 Phaeosphaeria nodorum 30.37 9.00e-42 163.00
IUUC-Ppa-095172 Physcomitrella patens 59.26 2.00e-110 391.00
IUUC-Pfo-096396 Poecilia formosa 48.41 5.00e-77 280.00
IUUC-Pab-098427 Pongo abelii 48.26 4.00e-76 277.00
IUUC-Pop-100016 Populus trichocarpa 71.92 3.00e-150 523.00
IUUC-Pca-101048 Procavia capensis 47.97 5.00e-75 273.00
IUUC-Ppe-102050 Prunus persica 71.79 1.00e-147 515.00
IUUC-Pva-103117 Pteropus vampyrus 48.41 1.00e-75 275.00
IUUC-Pgr-103307 Puccinia graminis 35.54 9.00e-59 220.00
IUUC-Ptt-103938 Puccinia triticina 39.85 6.00e-44 170.00
IUUC-Pte-104315 Pyrenophora teres 29.85 2.00e-38 152.00
IUUC-Pyt-104825 Pyrenophora triticirepentis 29.85 2.00e-38 152.00
IUUC-Rno-105523 Rattus norvegicus 48.70 1.00e-75 276.00
IUUC-Sce-106297 Saccharomyces cerevisiae 37.54 2.00e-52 198.00
IUUC-Sha-106981 Sarcophilus harrisii 50.86 2.00e-65 241.00
IUUC-Sja-107715 Schizosaccharomyces japonicus 36.29 4.00e-55 208.00
IUUC-Spo-108214 Schizosaccharomyces pombe 38.74 1.00e-54 207.00
IUUC-Smo-109034 Selaginella moellendorffii 54.08 5.00e-102 363.00
IUUC-Sit-110663 Setaria italica 63.37 4.00e-126 443.00
IUUC-Sly-110898 Solanum lycopersicum 69.91 5.00e-138 483.00
IUUC-Stu-112647 Solanum tuberosum 69.68 1.00e-114 404.00
IUUC-Sbi-114288 Sorghum bicolor 65.01 3.00e-128 450.00
IUUC-Sre-115065 Sporisorium reilianum 37.93 2.00e-67 249.00
IUUC-Ssc-115960 Sus scrofa 45.06 1.00e-77 282.00
IUUC-Tru-118382 Takifugu rubripes 50.29 6.00e-89 320.00
IUUC-Tsy-119585 Tarsius syrichta 43.02 1.00e-62 232.00
IUUC-Tni-120133 Tetraodon nigroviridis 48.12 4.00e-80 290.00
IUUC-Tca-121167 Theobroma cacao 75.28 1.00e-153 535.00
IUUC-Tre-122119 Trichoderma reesei 29.72 3.00e-34 138.00
IUUC-Tae-124928 Triticum aestivum 63.27 2.00e-119 421.00
IUUC-Tur-126682 Triticum urartu 66.54 8.00e-100 355.00
IUUC-Tme-127095 Tuber melanosporum 33.58 3.00e-49 188.00
IUUC-Tbe-128004 Tupaia belangeri 48.70 5.00e-76 276.00
IUUC-Ttr-129284 Tursiops truncatus 46.53 1.00e-71 262.00
IUUC-Uma-129527 Ustilago maydis 38.48 4.00e-68 251.00
IUUC-Vda-129854 Verticillium dahliae 31.30 1.00e-31 129.00
IUUC-Vpa-130681 Vicugna pacos 66.09 2.00e-31 128.00
IUUC-Vvi-131004 Vitis vinifera 72.86 1.00e-145 508.00
IUUC-Xtr-131928 Xenopus tropicalis 48.24 5.00e-76 276.00
IUUC-Xma-134290 Xiphophorus maculatus 48.13 2.00e-75 275.00
IUUC-Yli-134364 Yarrowia lipolytica 39.04 5.00e-55 207.00
IUUC-Zma-135658 Zea mays 63.51 3.00e-126 443.00
Created Date 25-Jun-2017

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