iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000018882.1	ENSONIT00000023797.1	ENSONIP00000023776.1
ENSONIG00000018882.1	ENSONIT00000023798.1	ENSONIP00000023777.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/GAT	2.30e-44	150.9	173	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 1    deeksklLerLlkskkPeDLreAnkLikelvkededkaekikkliseleevksnvkllnemlselspegeepednellqelyetckaar 89
           deeksk L rLl s +PeDLr+AnkLike+v+ed++++ek++k++++++evk++v+ll+++l+ +++e+ +++++el++ ly++c+++r
   Q: 173  DEEKSKTLSRLLNSTHPEDLRAANKLIKEMVQEDQKRVEKVSKRVNAIQEVKESVSLLSQLLEGYNKESCSQSNQELIKDLYNRCEKMR 261
           79*************************************************************************************** PP
   S: 90   pkllklieeeedndellaellkanDelnqvlnkykqlk 127
           p+l++l++++ed de+la++l+anD l+qv+n+y ql+
   Q: 262  PTLFRLASDTEDSDEALADILQANDSLTQVINQYRQLV 299
           **********************************9986 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MAVAAPPDEA SLQSRINKAT NPLNKETDWD SIKGFCDQLE NEPEGPQLAT RLLAHKIQSP 60
QEWEAMQALT VLETCMKNCG KRFHSEVGKF RFLNELIKVV SPKYLGARAP EAVKKKVLEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATTTTTC GCTATTCGCG CGATATGTTA CAAAAGTCTC GCGATAGCTT GCTTCTTGTT 60
TAGAATTCCC GAAAGATGGC GGTGGCGGCG CCTCCGGATG AGGCCAGCCT GCAGTCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like
IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR002014--VHS_dom

PROSITE

PS50180--GAE
PS50909--GAT
PS50179--VHS

Pfam

PF02883--Alpha_adaptinC2
PF03127--GAT
PF00790--VHS

SMART

SM00809--Alpha_adaptinC2
SM00288--VHS

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dme-031654	Drosophila melanogaster	31.74	9.00e-41	161.00
IUUC-Eca-034275	Equus caballus	58.67	0.00e+00	667.00
IUUC-Gac-042264	Gasterosteus aculeatus	78.00	0.00e+00	913.00
IUUC-Tru-117608	Takifugu rubripes	67.35	0.00e+00	822.00
IUUC-Tni-120838	Tetraodon nigroviridis	74.77	0.00e+00	902.00
IUUC-Vpa-130556	Vicugna pacos	52.13	6.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence