iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-10	41.2	480	532

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.................sd..tllvsGsdDgtikvWDlrtgv 34
           gH   +t++++                 s+  + lv++s D+ti  WD+r ++
   Q: 480  GHRKVITDIHWlpdsfeinrmgsvfenrSGinCQLVTCSADCTICFWDIRPQK 532
           79999*******8777777777666665333355**************88665 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MAPKPPKSPK GQKKGKKNMK QQLLVPEEEE PMNMESMGHP EIYPLVLTTK TQEIFNCRVD 60
EDMTDEQTYK LIKKEDILAD LQNRAAVSDF HPVKKIVREY PGEELLLVYD KDFKYGLNFY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGAAGGCG TTCTGTCAAT CTCAACAGGA GACTTTTTTT TTTTAATCTT AGCAACGGAC 60
GCGTCCTAGC AACAACTGCC AGCCCGCTGT TGCTGGAAAT TTGAGGTTTA TTTTCCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

mmu:242253

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001318	Ailuropoda melanoleuca	79.30	0.00e+00	1364.00
IUUC-Apl-003772	Anas platyrhynchos	51.96	0.00e+00	826.00
IUUC-Aca-004627	Anolis carolinensis	58.24	0.00e+00	1000.00
IUUC-Ame-011396	Astyanax mexicanus	42.92	0.00e+00	645.00
IUUC-Bta-012977	Bos taurus	78.19	0.00e+00	1362.00
IUUC-Cja-018966	Callithrix jacchus	78.67	0.00e+00	1360.00
IUUC-Cfa-021086	Canis familiaris	77.95	0.00e+00	1381.00
IUUC-Cpo-021919	Cavia porcellus	76.20	0.00e+00	1327.00
IUUC-Cre-022793	Chlamydomonas reinhardtii	31.80	4.00e-52	200.00
IUUC-Csa-023175	Chlorocebus sabaeus	79.80	0.00e+00	1367.00
IUUC-Cin-025511	Ciona intestinalis	43.72	0.00e+00	748.00
IUUC-Csv-026346	Ciona savignyi	45.87	0.00e+00	746.00
IUUC-Dre-027474	Danio rerio	40.25	0.00e+00	690.00
IUUC-Dme-031619	Drosophila melanogaster	25.42	5.00e-22	100.00
IUUC-Ete-032560	Echinops telfairi	72.15	0.00e+00	765.00
IUUC-Eca-033342	Equus caballus	78.85	0.00e+00	1363.00
IUUC-Eeu-035108	Erinaceus europaeus	74.64	0.00e+00	1226.00
IUUC-Fca-036352	Felis catus	76.19	0.00e+00	1355.00
IUUC-Fal-037291	Ficedula albicollis	46.00	0.00e+00	748.00
IUUC-Gga-040503	Gallus gallus	49.43	0.00e+00	789.00
IUUC-Gac-041827	Gasterosteus aculeatus	38.96	2.00e-162	566.00
IUUC-Ggo-044831	Gorilla gorilla	79.91	0.00e+00	1371.00
IUUC-Hsa-045840	Homo sapiens	80.02	0.00e+00	1374.00
IUUC-Lch-050243	Latimeria chalumnae	53.03	0.00e+00	904.00
IUUC-Loc-052614	Lepisosteus oculatus	53.33	0.00e+00	934.00
IUUC-Laf-053513	Loxodonta africana	77.40	0.00e+00	1198.00
IUUC-Mcc-055678	Macaca mulatta	79.80	0.00e+00	1367.00
IUUC-Meu-056375	Macropus eugenii	68.49	2.00e-161	563.00
IUUC-Mga-060015	Meleagris gallopavo	50.72	0.00e+00	768.00
IUUC-Mmr-060598	Microcebus murinus	74.49	0.00e+00	1272.00
IUUC-Mdo-062125	Monodelphis domestica	65.83	0.00e+00	1099.00
IUUC-Mpu-066891	Mustela putorius furo	77.54	0.00e+00	1345.00
IUUC-Mlu-068017	Myotis lucifugus	75.17	0.00e+00	1352.00
IUUC-Nle-069396	Nomascus leucogenys	78.69	0.00e+00	1336.00
IUUC-Opr-070226	Ochotona princeps	74.45	0.00e+00	912.00
IUUC-Ont-072684	Oreochromis niloticus	40.80	1.00e-177	617.00
IUUC-Oan-073141	Ornithorhynchus anatinus	63.23	2.00e-163	569.00
IUUC-Ocu-074198	Oryctolagus cuniculus	77.71	0.00e+00	1397.00
IUUC-Ola-087453	Oryzias latipes	38.46	9.00e-153	534.00
IUUC-Oga-089138	Otolemur garnettii	74.52	0.00e+00	1334.00
IUUC-Oar-090322	Ovis aries	75.37	0.00e+00	1351.00
IUUC-Ptr-091250	Pan troglodytes	79.91	0.00e+00	1372.00
IUUC-Pan-092051	Papio anubis	80.68	0.00e+00	1316.00
IUUC-Psi-093273	Pelodiscus sinensis	60.20	0.00e+00	1030.00
IUUC-Ppa-095837	Physcomitrella patens	34.91	1.00e-42	167.00
IUUC-Pfo-096244	Poecilia formosa	38.85	1.00e-167	583.00
IUUC-Pab-098623	Pongo abelii	79.80	0.00e+00	1368.00
IUUC-Pca-100831	Procavia capensis	65.43	0.00e+00	937.00
IUUC-Rno-105015	Rattus norvegicus	87.87	0.00e+00	1493.00
IUUC-Sha-107109	Sarcophilus harrisii	63.03	0.00e+00	881.00
IUUC-Smo-109594	Selaginella moellendorffii	29.50	9.00e-20	91.30
IUUC-Sar-113575	Sorex araneus	63.47	0.00e+00	1043.00
IUUC-Ssc-115610	Sus scrofa	76.98	0.00e+00	1365.00
IUUC-Tgu-116483	Taeniopygia guttata	47.14	0.00e+00	704.00
IUUC-Tru-117765	Takifugu rubripes	39.28	4.00e-167	582.00
IUUC-Tsy-118826	Tarsius syrichta	75.17	0.00e+00	1323.00
IUUC-Ttr-129263	Tursiops truncatus	70.22	0.00e+00	1160.00
IUUC-Vpa-130416	Vicugna pacos	72.36	0.00e+00	773.00
IUUC-Xtr-131930	Xenopus tropicalis	54.29	0.00e+00	948.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence