iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058632

Ensembl Protein ID

KEH30499

UniProt Accession

A0A072UL69; A0A072UL69_MEDTR

Genbank Protein ID

KEH30499.1

Protein Name

Ubiquitin-NEDD8 RUB1-like protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g073580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g073580	KEH30498	KEH30498
MTR_4g073580	KEH30499	KEH30499

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.00e-79	263.3	1	76
ULD/UDP/UBQ/UBQ_PIM	2.00e-47	160.5	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID RIKERVEEKE GIPPVQQRVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATACCCA ATTACCCATA CCCCGCATCG CTCAAACAGT TTCTCTCTTT CTATCTCTAT 60
CGCGCTCTCA CAACTCCAAG AAAGAACGAC GAGAAGAAGA AGAACAACAA GATGCAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006536	Arabidopsis lyrata	82.42	2.00e-67	246.00
IUUC-Ath-006811	Arabidopsis thaliana	82.97	3.00e-68	249.00
IUUC-Bdi-014376	Brachypodium distachyon	82.97	3.00e-68	249.00
IUUC-Bol-015848	Brassica oleracea	82.97	3.00e-68	249.00
IUUC-Cre-022655	Chlamydomonas reinhardtii	78.57	2.00e-67	246.00
IUUC-Cho-024788	Choloepus hoffmanni	58.49	1.00e-19	87.00
IUUC-Gma-042815	Glycine max	83.06	9.00e-69	251.00
IUUC-Mac-064471	Musa acuminata	82.97	4.00e-68	249.00
IUUC-Obr-076856	Oryza brachyantha	82.51	3.00e-68	249.00
IUUC-Ogl-077485	Oryza glaberrima	82.97	3.00e-68	249.00
IUUC-Oin-079667	Oryza indica	82.97	3.00e-68	249.00
IUUC-Oru-084544	Oryza rufipogon	82.51	3.00e-68	249.00
IUUC-Osa-085928	Oryza sativa	82.97	3.00e-68	249.00
IUUC-Ppa-095604	Physcomitrella patens	78.02	4.00e-66	242.00
IUUC-Pop-098831	Populus trichocarpa	81.32	2.00e-77	280.00
IUUC-Ppe-101565	Prunus persica	81.42	7.00e-78	281.00
IUUC-Sit-110816	Setaria italica	82.97	3.00e-68	249.00
IUUC-Sly-111900	Solanum lycopersicum	82.97	3.00e-68	249.00
IUUC-Stu-112424	Solanum tuberosum	82.97	3.00e-68	249.00
IUUC-Sbi-114209	Sorghum bicolor	82.97	3.00e-68	249.00
IUUC-Tca-121211	Theobroma cacao	82.51	2.00e-68	250.00
IUUC-Tae-124695	Triticum aestivum	82.51	3.00e-68	249.00
IUUC-Tur-126750	Triticum urartu	82.51	3.00e-68	249.00
IUUC-Vpa-130121	Vicugna pacos	52.13	8.00e-12	60.80
IUUC-Vvi-131310	Vitis vinifera	81.87	2.00e-67	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence