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Tag Content
iUUCD ID IUUC-Sly-111330
Ensembl Protein ID Solyc02g078970.2.1
UniProt Accession K4B9C1; K4B9C1_SOLLC
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc02g078970.2 Solyc02g078970.2.1 Solyc02g078970.2.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.20e-25 87.0 321 359
UBD/Beta-Prp 8.90e-44 150.6 267 484
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
    gHt v+++ + +d t ++++++D+ ik WD+ tg +++
   Q: 321 GHTKAVRDI-WfsNDgTKFLTAGYDKYIKYWDTETGQVIQ 359
    8********.**9889*******************99887 PP
   


   UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwd.lstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqc 128
    ++ l+++ sgh+++v+a++f p+ ++++++ D +k+wd +++gkc++t+ gh++ v+++ fs +g k+++++ d++i+ wd+etgq+
   Q: 267 IPKRLVHTWSGHTKGVSAIRFFPKHGhLILSAGMDTKVKIWDvYNSGKCMRTYMGHTKAVRDIWFSNDGTKFLTAGYDKYIKYWDTETGQV 357
    567899**************9887666**************72569********************************************* PP
   S: 129 leetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
    ++++ +g+ v ++ ++d+ n+l +G+ D+++ Wd+++g++ ++ + h ++v+ ++f +n +++v+ s+d+++++w++ +++
   Q: 358 IQTFTTGKIPYVVRLNPDEDKqNVLLAGMSDKKIVQWDINSGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYI 447
    **99999999999999999999**************************98.********************************88777666 PP
   S: 219 ng.htdnvksvrfspnderlvsgssDgsiriWdlrsg 254
    + h + s+ +pn+++++ s D++i i+ +r +
   Q: 448 SEpHMHSMPSISPHPNGNWIAAQSLDNQILIYSTRER 484
    556*****************************77665 PP
   

Organism Solanum lycopersicum
Protein Sequence
(Fasta)
MDLLQSSYED ESPDSSPIRM LPSKSAAPKV DDTMLALTVA GEAARAQSKP LDPTQHVVGF 60
NPTYEQLWAP ICGPAHPYAK DGLAQGLRNH KLGFVEDASI EPFVFDEQYN TFQKYGYAVD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sly-111330|E3,WD_repeat;UBD,Beta-Prp|Solanum lycopersicum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATACACTG TTAGCTCAAA AAAAAATAAA AAAAATTAGG TTTCTAATCA AAATATAAAG 60
CTTTCGCCAT TTTTCATAGT TTGTGCGTAT CCCATGGATC TTTTACAATC TTCATACGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sly-111330|E3,WD_repeat;UBD,Beta-Prp|Solanum lycopersicum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG sly:101258325
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000473 Aegilops tauschii 71.05 0.00e+00 769.00
IUUC-Aml-002243 Ailuropoda melanoleuca 46.88 2.00e-96 345.00
IUUC-Atr-002502 Amborella trichopoda 75.13 0.00e+00 879.00
IUUC-Apl-003885 Anas platyrhynchos 51.68 3.00e-153 534.00
IUUC-Aca-004854 Anolis carolinensis 35.56 4.00e-89 321.00
IUUC-Aly-006158 Arabidopsis lyrata 79.62 0.00e+00 907.00
IUUC-Ath-007474 Arabidopsis thaliana 77.57 0.00e+00 877.00
IUUC-Ago-007726 Ashbya gossypii 39.00 3.00e-70 258.00
IUUC-Acl-008220 Aspergillus clavatus 51.30 7.00e-110 390.00
IUUC-Afl-008473 Aspergillus flavus 39.01 3.00e-116 411.00
IUUC-Afu-008773 Aspergillus fumigatus 41.79 6.00e-120 424.00
IUUC-Ani-009323 Aspergillus nidulans 40.16 1.00e-103 369.00
IUUC-Ang-009851 Aspergillus niger 51.87 2.00e-111 395.00
IUUC-Aor-009950 Aspergillus oryzae 39.01 3.00e-116 411.00
IUUC-Ate-010372 Aspergillus terreus 52.45 2.00e-111 395.00
IUUC-Ame-011660 Astyanax mexicanus 49.91 1.00e-153 535.00
IUUC-Bgr-012230 Blumeria graminis 40.04 2.00e-108 385.00
IUUC-Bta-012568 Bos taurus 51.22 1.00e-152 532.00
IUUC-Bci-013646 Botrytis cinerea 54.22 2.00e-110 392.00
IUUC-Bdi-014199 Brachypodium distachyon 69.02 0.00e+00 775.00
IUUC-Bol-015695 Brassica oleracea 78.57 0.00e+00 907.00
IUUC-Bra-017923 Brassica rapa 78.32 0.00e+00 917.00
IUUC-Cel-018535 Caenorhabditis elegans 39.59 6.00e-124 437.00
IUUC-Cja-019071 Callithrix jacchus 48.95 2.00e-152 531.00
IUUC-Cfa-020559 Canis familiaris 50.84 2.00e-152 532.00
IUUC-Cpo-022356 Cavia porcellus 50.66 4.00e-152 530.00
IUUC-Cre-022594 Chlamydomonas reinhardtii 50.58 1.00e-93 335.00
IUUC-Csa-023125 Chlorocebus sabaeus 50.84 2.00e-152 531.00
IUUC-Cho-024676 Choloepus hoffmanni 48.22 3.00e-141 494.00
IUUC-Cin-025229 Ciona intestinalis 48.39 7.00e-145 506.00
IUUC-Csv-025868 Ciona savignyi 67.39 3.00e-37 145.00
IUUC-Cgl-026739 Colletotrichum gloeosporioides 47.97 3.00e-97 348.00
IUUC-Cne-026885 Cryptococcus neoformans 47.84 6.00e-134 470.00
IUUC-Dre-027631 Danio rerio 51.12 2.00e-157 548.00
IUUC-Dno-029815 Dasypus novemcinctus 49.81 2.00e-149 522.00
IUUC-Dor-031143 Dipodomys ordii 61.90 2.00e-130 458.00
IUUC-Dse-031520 Dothistroma septosporum 48.46 4.00e-98 351.00
IUUC-Dme-032050 Drosophila melanogaster 46.27 2.00e-146 511.00
IUUC-Ete-032866 Echinops telfairi 49.53 5.00e-146 510.00
IUUC-Eca-033384 Equus caballus 48.78 8.00e-151 526.00
IUUC-Eeu-034471 Erinaceus europaeus 40.38 2.00e-100 358.00
IUUC-Fca-035727 Felis catus 48.95 8.00e-153 533.00
IUUC-Fal-036774 Ficedula albicollis 51.59 2.00e-155 541.00
IUUC-Fox-037951 Fusarium oxysporum 50.55 4.00e-110 390.00
IUUC-Fso-038287 Fusarium solani 52.94 2.00e-109 388.00
IUUC-Gmo-039670 Gadus morhua 49.05 4.00e-158 550.00
IUUC-Ggr-039764 Gaeumannomyces graminis 50.14 4.00e-105 374.00
IUUC-Gga-040293 Gallus gallus 51.78 4.00e-156 543.00
IUUC-Gac-042159 Gasterosteus aculeatus 48.52 7.00e-157 546.00
IUUC-Gma-044299 Glycine max 81.14 0.00e+00 843.00
IUUC-Ggo-044864 Gorilla gorilla 50.84 1.00e-152 532.00
IUUC-Hsa-046602 Homo sapiens 50.84 1.00e-152 532.00
IUUC-Itr-047985 Ictidomys tridecemlineatus 58.91 4.00e-136 477.00
IUUC-Kpa-049318 Komagataella pastoris 46.41 1.00e-90 326.00
IUUC-Lch-049796 Latimeria chalumnae 41.77 1.00e-124 439.00
IUUC-Lpe-051153 Leersia perrieri 69.54 0.00e+00 793.00
IUUC-Loc-052467 Lepisosteus oculatus 49.81 5.00e-154 536.00
IUUC-Lma-053107 Leptosphaeria maculans 52.41 2.00e-111 395.00
IUUC-Laf-053787 Loxodonta africana 49.48 1.00e-155 541.00
IUUC-Mcc-055706 Macaca mulatta 50.84 1.00e-152 532.00
IUUC-Meu-056757 Macropus eugenii 59.70 8.00e-117 413.00
IUUC-Mor-057079 Magnaporthe oryzae 49.05 2.00e-106 378.00
IUUC-Mpo-057533 Magnaporthe poae 50.00 1.00e-105 376.00
IUUC-Mtr-057950 Medicago truncatula 80.99 0.00e+00 904.00
IUUC-Mla-058910 Melampsora laricipopulina 59.02 8.00e-133 466.00
IUUC-Mga-059366 Meleagris gallopavo 51.78 1.00e-155 542.00
IUUC-Mvi-060349 Microbotryum violaceum 56.64 2.00e-126 445.00
IUUC-Mmr-061209 Microcebus murinus 49.13 2.00e-156 545.00
IUUC-Mdo-062118 Monodelphis domestica 51.03 9.00e-156 542.00
IUUC-Mmu-063173 Mus musculus 49.73 7.00e-153 533.00
IUUC-Mac-065109 Musa acuminata 89.91 0.00e+00 661.00
IUUC-Mpu-066659 Mustela putorius furo 50.84 9.00e-153 532.00
IUUC-Mlu-067029 Myotis lucifugus 51.13 9.00e-153 532.00
IUUC-Nfi-068334 Neosartorya fischeri 42.57 1.00e-121 429.00
IUUC-Ncr-068675 Neurospora crassa 46.93 6.00e-92 330.00
IUUC-Nle-070113 Nomascus leucogenys 50.84 8.00e-153 533.00
IUUC-Opr-070685 Ochotona princeps 60.48 2.00e-140 491.00
IUUC-Ont-071680 Oreochromis niloticus 49.27 5.00e-156 543.00
IUUC-Oan-073573 Ornithorhynchus anatinus 49.40 3.00e-141 494.00
IUUC-Ocu-074074 Oryctolagus cuniculus 51.03 3.00e-156 544.00
IUUC-Oba-075625 Oryza barthii 70.10 0.00e+00 806.00
IUUC-Obr-076510 Oryza brachyantha 69.47 0.00e+00 803.00
IUUC-Ogl-077275 Oryza glaberrima 70.10 0.00e+00 806.00
IUUC-Ogu-078563 Oryza glumaepatula 70.10 0.00e+00 806.00
IUUC-Oin-079898 Oryza indica 79.95 0.00e+00 671.00
IUUC-Olo-081080 Oryza longistaminata 71.71 0.00e+00 719.00
IUUC-Oni-083121 Oryza nivara 70.10 0.00e+00 806.00
IUUC-Opu-083329 Oryza punctata 70.10 0.00e+00 799.00
IUUC-Oru-084807 Oryza rufipogon 68.91 0.00e+00 711.00
IUUC-Osa-086039 Oryza sativa 70.15 0.00e+00 808.00
IUUC-Ola-087149 Oryzias latipes 50.54 7.00e-158 550.00
IUUC-Olu-087627 Ostreococcus lucimarinus 48.26 3.00e-140 491.00
IUUC-Oga-088359 Otolemur garnettii 50.84 9.00e-153 532.00
IUUC-Oar-089390 Ovis aries 50.84 2.00e-152 531.00
IUUC-Ptr-090894 Pan troglodytes 50.84 1.00e-152 532.00
IUUC-Pan-092476 Papio anubis 50.84 1.00e-152 532.00
IUUC-Psi-093527 Pelodiscus sinensis 47.54 3.00e-139 488.00
IUUC-Pno-094771 Phaeosphaeria nodorum 51.26 3.00e-110 390.00
IUUC-Ppa-095386 Physcomitrella patens 73.21 0.00e+00 843.00
IUUC-Pfo-096139 Poecilia formosa 48.60 8.00e-157 546.00
IUUC-Pab-097838 Pongo abelii 49.89 6.00e-129 453.00
IUUC-Pop-099962 Populus trichocarpa 83.67 0.00e+00 905.00
IUUC-Pca-100876 Procavia capensis 52.42 3.00e-115 408.00
IUUC-Ppe-101777 Prunus persica 82.88 0.00e+00 899.00
IUUC-Pva-102418 Pteropus vampyrus 48.78 3.00e-152 531.00
IUUC-Pgr-103456 Puccinia graminis 48.71 8.00e-144 503.00
IUUC-Ptt-103731 Puccinia triticina 45.05 2.00e-130 458.00
IUUC-Pte-104386 Pyrenophora teres 51.56 1.00e-108 385.00
IUUC-Pyt-104560 Pyrenophora triticirepentis 51.56 2.00e-108 385.00
IUUC-Rno-105694 Rattus norvegicus 47.55 3.00e-144 504.00
IUUC-Sce-106339 Saccharomyces cerevisiae 36.68 1.00e-73 269.00
IUUC-Sha-106709 Sarcophilus harrisii 50.66 5.00e-155 540.00
IUUC-Sja-107817 Schizosaccharomyces japonicus 36.74 1.00e-108 385.00
IUUC-Spo-108331 Schizosaccharomyces pombe 49.42 6.00e-103 367.00
IUUC-Ssl-108530 Sclerotinia sclerotiorum 54.31 6.00e-99 353.00
IUUC-Smo-109326 Selaginella moellendorffii 61.77 0.00e+00 657.00
IUUC-Sit-110446 Setaria italica 71.20 0.00e+00 775.00
IUUC-Stu-112610 Solanum tuberosum 96.90 0.00e+00 1050.00
IUUC-Sar-113065 Sorex araneus 36.25 8.00e-35 140.00
IUUC-Sbi-114005 Sorghum bicolor 68.27 0.00e+00 757.00
IUUC-Sre-114988 Sporisorium reilianum 45.80 7.00e-135 473.00
IUUC-Ssc-115760 Sus scrofa 48.95 1.00e-152 532.00
IUUC-Tgu-116493 Taeniopygia guttata 51.59 5.00e-157 546.00
IUUC-Tru-118489 Takifugu rubripes 49.06 1.00e-153 535.00
IUUC-Tsy-119332 Tarsius syrichta 49.13 9.00e-157 546.00
IUUC-Tni-120202 Tetraodon nigroviridis 47.85 5.00e-146 510.00
IUUC-Tca-121429 Theobroma cacao 81.23 0.00e+00 923.00
IUUC-Tre-122162 Trichoderma reesei 53.78 1.00e-111 396.00
IUUC-Tvi-122500 Trichoderma virens 53.78 6.00e-112 397.00
IUUC-Tae-125557 Triticum aestivum 68.67 0.00e+00 779.00
IUUC-Tur-126554 Triticum urartu 68.74 0.00e+00 775.00
IUUC-Tme-126919 Tuber melanosporum 41.91 8.00e-125 439.00
IUUC-Tbe-127968 Tupaia belangeri 46.50 1.00e-141 496.00
IUUC-Ttr-129215 Tursiops truncatus 50.66 1.00e-150 526.00
IUUC-Uma-129622 Ustilago maydis 45.83 7.00e-136 476.00
IUUC-Vda-129750 Verticillium dahliae 53.20 4.00e-111 394.00
IUUC-Vpa-130617 Vicugna pacos 50.84 5.00e-147 513.00
IUUC-Vvi-131238 Vitis vinifera 80.71 0.00e+00 904.00
IUUC-Xtr-131865 Xenopus tropicalis 47.98 2.00e-154 538.00
IUUC-Xma-133627 Xiphophorus maculatus 48.42 6.00e-156 543.00
IUUC-Yli-134390 Yarrowia lipolytica 51.58 4.00e-104 370.00
IUUC-Zma-135925 Zea mays 71.79 0.00e+00 761.00
Created Date 25-Jun-2017

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