iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olu-087644

Ensembl Protein ID

ABO94723

UniProt Accession

A4RSU8; A4RSU8_OSTLU

Genbank Protein ID

ABO94723.1

Protein Name

WD-repeat protein

Genbank Nucleotide ID

CP000582

Gene Name

Wdr50; OSTLU_119571

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OSTLU_119571	ABO94723	ABO94723

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-08	30.8	237	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclafsd..tllvsGsdDgtikvWDlrtgvllk 37
           v+++ fs     ++  +dDg +++WD+r +++lk
   Q: 237  VRACVFSHagMEIIGVTDDGLLYCWDVRMQRCLK 270
           66666733324488999**************997 PP

Organism

Ostreococcus lucimarinus

Protein Sequence
(Fasta)

MGGSRGRAWI DDHGDGGFCG NFANKRRVEA VEFAGSELAL SQPDEESISF IGSKVVKRWS 60
DGTHTSTGRA FPEVGNSAVR VGLEARRNLN LLDFTRVKDF DFDGPPESAA ICVHFHHKRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGGCT CACGTGGCCG TGCCTGGATA GACGACCATG GTGACGGCGG TTTCTGCGGA 60
AATTTTGCGA ACAAGCGACG GGTGGAGGCA GTTGAGTTTG CGGGTTCTGA ATTGGCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

olu:OSTLU_119571

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	25.31	1.00e-28	119.00
IUUC-Aml-002252	Ailuropoda melanoleuca	25.00	5.00e-19	87.00
IUUC-Atr-002575	Amborella trichopoda	26.85	9.00e-32	129.00
IUUC-Aly-006512	Arabidopsis lyrata	24.62	2.00e-29	121.00
IUUC-Ath-007244	Arabidopsis thaliana	24.31	1.00e-29	122.00
IUUC-Ago-007895	Ashbya gossypii	25.00	4.00e-18	84.00
IUUC-Acl-008343	Aspergillus clavatus	22.95	2.00e-15	75.50
IUUC-Afl-008445	Aspergillus flavus	21.55	8.00e-15	73.20
IUUC-Aor-009986	Aspergillus oryzae	21.55	7.00e-14	69.70
IUUC-Ame-011338	Astyanax mexicanus	25.16	2.00e-22	97.80
IUUC-Bgr-012201	Blumeria graminis	40.30	5.00e-11	60.10
IUUC-Bta-013058	Bos taurus	25.40	3.00e-19	87.80
IUUC-Bci-013619	Botrytis cinerea	33.90	7.00e-14	69.70
IUUC-Bdi-014771	Brachypodium distachyon	26.23	7.00e-30	122.00
IUUC-Bol-015230	Brassica oleracea	24.84	2.00e-28	117.00
IUUC-Bra-017561	Brassica rapa	25.47	6.00e-29	119.00
IUUC-Cel-018293	Caenorhabditis elegans	20.99	4.00e-10	57.00
IUUC-Cja-019503	Callithrix jacchus	25.40	1.00e-18	85.10
IUUC-Cfa-020743	Canis familiaris	25.72	2.00e-19	87.80
IUUC-Cpo-021488	Cavia porcellus	25.87	2.00e-16	77.80
IUUC-Cre-022926	Chlamydomonas reinhardtii	29.55	2.00e-36	144.00
IUUC-Csa-023110	Chlorocebus sabaeus	24.67	8.00e-18	82.80
IUUC-Cin-025208	Ciona intestinalis	23.43	2.00e-17	80.50
IUUC-Cme-027351	Cyanidioschyzon merolae	24.11	2.00e-15	74.70
IUUC-Dre-027524	Danio rerio	24.76	4.00e-16	77.00
IUUC-Dno-029243	Dasypus novemcinctus	26.28	3.00e-19	87.80
IUUC-Dor-030110	Dipodomys ordii	25.55	2.00e-19	88.60
IUUC-Dse-031217	Dothistroma septosporum	36.99	1.00e-10	59.30
IUUC-Dme-031999	Drosophila melanogaster	21.66	1.00e-09	55.50
IUUC-Eca-034350	Equus caballus	24.76	2.00e-18	84.30
IUUC-Eeu-034991	Erinaceus europaeus	24.52	6.00e-18	83.20
IUUC-Fal-036614	Ficedula albicollis	22.62	2.00e-19	87.80
IUUC-Gmo-039183	Gadus morhua	27.15	2.00e-23	100.00
IUUC-Gga-040922	Gallus gallus	24.19	5.00e-22	96.70
IUUC-Gac-041475	Gasterosteus aculeatus	27.88	4.00e-22	97.10
IUUC-Gma-043598	Glycine max	26.38	3.00e-32	130.00
IUUC-Ggo-044517	Gorilla gorilla	25.08	2.00e-18	85.10
IUUC-Hsa-045741	Homo sapiens	25.08	2.00e-18	85.10
IUUC-Hvu-047463	Hordeum vulgare	26.29	3.00e-14	68.90
IUUC-Itr-048128	Ictidomys tridecemlineatus	25.95	8.00e-21	92.40
IUUC-Kpa-049335	Komagataella pastoris	22.87	6.00e-11	59.70
IUUC-Lch-049816	Latimeria chalumnae	25.24	1.00e-20	91.70
IUUC-Lpe-051140	Leersia perrieri	25.30	4.00e-28	117.00
IUUC-Loc-051942	Lepisosteus oculatus	25.71	1.00e-18	85.50
IUUC-Laf-054245	Loxodonta africana	25.72	3.00e-19	87.40
IUUC-Meu-056300	Macropus eugenii	24.36	4.00e-15	73.20
IUUC-Mor-057184	Magnaporthe oryzae	23.41	9.00e-12	62.80
IUUC-Mtr-057652	Medicago truncatula	25.48	2.00e-29	121.00
IUUC-Mga-060179	Meleagris gallopavo	24.75	8.00e-22	95.50
IUUC-Mvi-060435	Microbotryum violaceum	23.46	1.00e-20	92.80
IUUC-Mdo-062187	Monodelphis domestica	24.84	3.00e-16	77.40
IUUC-Mmu-063386	Mus musculus	25.71	2.00e-19	88.20
IUUC-Mpu-066084	Mustela putorius furo	25.72	2.00e-18	84.30
IUUC-Mlu-068130	Myotis lucifugus	26.20	2.00e-19	88.20
IUUC-Nle-069743	Nomascus leucogenys	23.84	2.00e-14	71.60
IUUC-Opr-071111	Ochotona princeps	25.17	7.00e-19	86.30
IUUC-Ont-071979	Oreochromis niloticus	24.60	8.00e-21	92.80
IUUC-Ocu-073754	Oryctolagus cuniculus	25.48	3.00e-21	94.00
IUUC-Oba-075007	Oryza barthii	25.61	7.00e-29	119.00
IUUC-Obr-076447	Oryza brachyantha	25.46	1.00e-27	115.00
IUUC-Ogl-077733	Oryza glaberrima	25.61	6.00e-29	119.00
IUUC-Ogu-078828	Oryza glumaepatula	25.61	7.00e-29	119.00
IUUC-Oin-080152	Oryza indica	25.61	7.00e-29	119.00
IUUC-Olo-080983	Oryza longistaminata	24.70	2.00e-27	115.00
IUUC-Oni-082443	Oryza nivara	25.61	8.00e-29	119.00
IUUC-Opu-083771	Oryza punctata	25.61	5.00e-29	120.00
IUUC-Oru-084272	Oryza rufipogon	25.61	8.00e-29	119.00
IUUC-Osa-085885	Oryza sativa	25.61	8.00e-29	119.00
IUUC-Oga-088834	Otolemur garnettii	26.37	1.00e-19	88.60
IUUC-Oar-089712	Ovis aries	25.40	2.00e-19	88.20
IUUC-Pan-092561	Papio anubis	25.33	3.00e-18	84.30
IUUC-Ppa-095397	Physcomitrella patens	29.69	8.00e-32	129.00
IUUC-Pfo-097068	Poecilia formosa	26.38	8.00e-20	89.40
IUUC-Pop-099471	Populus trichocarpa	27.24	1.00e-24	105.00
IUUC-Ppe-101446	Prunus persica	26.73	2.00e-30	124.00
IUUC-Pva-102851	Pteropus vampyrus	24.68	4.00e-13	67.40
IUUC-Pgr-103370	Puccinia graminis	23.66	2.00e-19	88.20
IUUC-Ptt-103838	Puccinia triticina	25.08	7.00e-20	89.70
IUUC-Rno-104910	Rattus norvegicus	25.55	4.00e-18	84.00
IUUC-Sce-106258	Saccharomyces cerevisiae	23.46	2.00e-16	78.20
IUUC-Sja-107746	Schizosaccharomyces japonicus	22.46	1.00e-18	85.50
IUUC-Spo-108268	Schizosaccharomyces pombe	23.29	1.00e-18	85.90
IUUC-Smo-108815	Selaginella moellendorffii	26.87	2.00e-34	137.00
IUUC-Sit-109706	Setaria italica	25.77	1.00e-27	115.00
IUUC-Sly-111533	Solanum lycopersicum	26.25	9.00e-31	125.00
IUUC-Stu-112853	Solanum tuberosum	27.19	9.00e-33	132.00
IUUC-Sbi-114589	Sorghum bicolor	26.09	2.00e-29	121.00
IUUC-Ssc-115916	Sus scrofa	24.76	7.00e-19	86.30
IUUC-Tgu-117291	Taeniopygia guttata	23.10	2.00e-19	87.80
IUUC-Tru-118724	Takifugu rubripes	26.52	5.00e-24	103.00
IUUC-Tsy-118928	Tarsius syrichta	26.03	1.00e-11	62.00
IUUC-Tca-121229	Theobroma cacao	26.93	2.00e-33	134.00
IUUC-Tae-123598	Triticum aestivum	25.31	5.00e-29	119.00
IUUC-Tur-126082	Triticum urartu	22.88	1.00e-20	91.70
IUUC-Ttr-128904	Tursiops truncatus	24.23	9.00e-14	69.30
IUUC-Vpa-130817	Vicugna pacos	24.84	5.00e-19	86.70
IUUC-Vvi-130982	Vitis vinifera	26.91	1.00e-28	118.00
IUUC-Xtr-132971	Xenopus tropicalis	27.54	8.00e-27	112.00
IUUC-Xma-133391	Xiphophorus maculatus	26.06	2.00e-19	88.20
IUUC-Yli-134613	Yarrowia lipolytica	25.00	1.00e-16	78.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence