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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Spo-108259
Ensembl Protein ID SPBC16A3.09c.1:pep
UniProt Accession O42915; O13409; O60193; Q1MVD5; UFD1_SCHPO
Genbank Protein ID CAA06722.1; CAA06721.1; CAB59876.1; AAB87522.1
Protein Name Ubiquitin fusion degradation protein 1
Genbank Nucleotide ID AJ005825; AJ005824; CU329671; AF034137
Gene Name ufd1; SPBC16A3.09c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC16A3.09c SPBC16A3.09c.1 SPBC16A3.09c.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
DUB/Other 45.92 1.00e-50 197.00 IUUC-Hsa-046680
UBD/Other/Other 45.92 1.00e-50 197.00 IUUC-Hsa-046680
UBD/Other/Other 44.22 3.00e-67 249.00 IUUC-Sce-106174
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Functions at a post-ubiquitation step in the ubiquitin fusion degradation (UFD) pathway. It is required for vegetative growth (By similarity).
 Functions at a post-ubiquitation step in the ubiquitin fusion degradation (UFD) pathway. It is required for vegetative growth (By similarity).
Protein Sequence
(Fasta)
MFGGSFFSSD DDGFSMMSQL RSAFHNNVNQ RFDTRYRCYP VAMIPGEERP NVNYGGKVIL 60
PPSALEKLSR LNVSYPMLFD FENEAAEKKT HGGVLEFIAE EGRVYLPYWM MTTLSLEPGD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108259|DUB,DUB/Other;UBD,UBD/Other/Other|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCTTTCCTT TTTTCGCAAA AAAAGCAAAT ATGGTATGGT TTTTTTAGAG AATGCGTACG 60
TTGACTTACT CACGTATTAG TTTGGCGGCA GCTTTTTCTC AAGCGACGAT GATGGTTTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108259|DUB,DUB/Other;UBD,UBD/Other/Other|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
Interpro

IPR004854--UFD1
Pfam

PF03152--UFD1
Gene Ontology

GO:0005829--C:cytosol
GO:0005783--C:endoplasmic reticulum
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0005634--C:nucleus
GO:1990112--C:RQC complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0032183--F:SUMO binding
GO:1990116--P:ribosome-associated ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway
KEGG spo:SPBC16A3.09c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000441 Aegilops tauschii 47.54 3.00e-53 200.00
IUUC-Aml-001398 Ailuropoda melanoleuca 45.92 4.00e-54 202.00
IUUC-Atr-002449 Amborella trichopoda 48.37 5.00e-44 169.00
IUUC-Apl-004065 Anas platyrhynchos 45.15 5.00e-48 182.00
IUUC-Aca-004973 Anolis carolinensis 44.44 1.00e-57 214.00
IUUC-Aly-005501 Arabidopsis lyrata 45.83 3.00e-52 196.00
IUUC-Ath-007324 Arabidopsis thaliana 41.95 2.00e-54 203.00
IUUC-Ago-007918 Ashbya gossypii 46.84 5.00e-76 275.00
IUUC-Acl-008362 Aspergillus clavatus 43.24 2.00e-79 287.00
IUUC-Afl-008690 Aspergillus flavus 43.82 3.00e-80 289.00
IUUC-Afu-008787 Aspergillus fumigatus 44.32 4.00e-80 289.00
IUUC-Ani-009385 Aspergillus nidulans 44.51 2.00e-69 254.00
IUUC-Ang-009709 Aspergillus niger 44.90 6.00e-77 278.00
IUUC-Aor-010240 Aspergillus oryzae 43.82 3.00e-80 289.00
IUUC-Ate-010551 Aspergillus terreus 44.17 2.00e-79 286.00
IUUC-Ame-011417 Astyanax mexicanus 41.06 2.00e-56 210.00
IUUC-Bgr-011986 Blumeria graminis 42.59 2.00e-67 246.00
IUUC-Bta-012559 Bos taurus 50.00 3.00e-54 202.00
IUUC-Bci-013767 Botrytis cinerea 43.29 1.00e-71 261.00
IUUC-Bdi-014579 Brachypodium distachyon 47.25 1.00e-52 198.00
IUUC-Bol-015824 Brassica oleracea 46.70 2.00e-52 197.00
IUUC-Bra-017620 Brassica rapa 48.07 3.00e-52 196.00
IUUC-Cel-018590 Caenorhabditis elegans 44.79 5.00e-39 152.00
IUUC-Cja-019487 Callithrix jacchus 45.76 4.00e-54 202.00
IUUC-Cfa-020497 Canis familiaris 46.32 2.00e-54 203.00
IUUC-Cpo-022150 Cavia porcellus 45.92 3.00e-54 203.00
IUUC-Cre-023007 Chlamydomonas reinhardtii 48.65 1.00e-48 184.00
IUUC-Csa-023602 Chlorocebus sabaeus 45.92 4.00e-54 202.00
IUUC-Cin-025594 Ciona intestinalis 42.86 1.00e-55 207.00
IUUC-Csv-026040 Ciona savignyi 37.09 8.00e-56 208.00
IUUC-Cgl-026460 Colletotrichum gloeosporioides 42.86 1.00e-71 261.00
IUUC-Cne-026990 Cryptococcus neoformans 34.02 2.00e-44 171.00
IUUC-Cme-027323 Cyanidioschyzon merolae 40.99 4.00e-35 139.00
IUUC-Dre-027987 Danio rerio 40.96 7.00e-55 205.00
IUUC-Dor-030294 Dipodomys ordii 45.30 3.00e-55 206.00
IUUC-Dse-031411 Dothistroma septosporum 41.62 2.00e-72 264.00
IUUC-Dme-031798 Drosophila melanogaster 39.92 4.00e-55 206.00
IUUC-Ete-032432 Echinops telfairi 45.80 7.00e-55 205.00
IUUC-Eca-034427 Equus caballus 45.92 4.00e-54 202.00
IUUC-Eeu-034917 Erinaceus europaeus 55.17 5.00e-42 162.00
IUUC-Fca-035380 Felis catus 46.32 2.00e-54 203.00
IUUC-Fal-037659 Ficedula albicollis 45.73 7.00e-56 208.00
IUUC-Fox-038062 Fusarium oxysporum 50.91 3.00e-30 122.00
IUUC-Fso-038111 Fusarium solani 42.34 3.00e-70 256.00
IUUC-Gmo-039298 Gadus morhua 51.87 8.00e-54 201.00
IUUC-Ggr-039771 Gaeumannomyces graminis 38.59 2.00e-65 240.00
IUUC-Gga-040313 Gallus gallus 44.87 2.00e-55 207.00
IUUC-Gac-042009 Gasterosteus aculeatus 52.72 2.00e-53 201.00
IUUC-Gma-043844 Glycine max 42.13 2.00e-53 200.00
IUUC-Ggo-044639 Gorilla gorilla 39.78 7.00e-49 185.00
IUUC-Hsa-046680 Homo sapiens 45.92 4.00e-54 202.00
IUUC-Hvu-047614 Hordeum vulgare 46.99 8.00e-53 198.00
IUUC-Itr-047987 Ictidomys tridecemlineatus 45.92 4.00e-54 202.00
IUUC-Kpa-049136 Komagataella pastoris 44.03 9.00e-77 278.00
IUUC-Lch-050607 Latimeria chalumnae 44.02 7.00e-53 198.00
IUUC-Lpe-050726 Leersia perrieri 47.54 8.00e-53 199.00
IUUC-Loc-051848 Lepisosteus oculatus 50.25 9.00e-55 204.00
IUUC-Lma-053187 Leptosphaeria maculans 42.12 6.00e-74 268.00
IUUC-Laf-053569 Loxodonta africana 51.60 2.00e-52 197.00
IUUC-Mcc-055275 Macaca mulatta 45.45 2.00e-54 204.00
IUUC-Mor-056967 Magnaporthe oryzae 41.86 9.00e-71 258.00
IUUC-Mpo-057399 Magnaporthe poae 39.89 1.00e-66 244.00
IUUC-Mtr-058353 Medicago truncatula 49.18 2.00e-53 201.00
IUUC-Mla-058830 Melampsora laricipopulina 33.14 9.00e-45 172.00
IUUC-Mga-059803 Meleagris gallopavo 45.15 9.00e-48 181.00
IUUC-Mvi-060456 Microbotryum violaceum 31.62 2.00e-41 161.00
IUUC-Mmr-060573 Microcebus murinus 44.44 2.00e-54 203.00
IUUC-Mdo-062831 Monodelphis domestica 46.32 2.00e-55 206.00
IUUC-Mmu-064302 Mus musculus 44.87 6.00e-54 202.00
IUUC-Mac-064745 Musa acuminata 48.63 1.00e-53 201.00
IUUC-Mpu-065922 Mustela putorius furo 45.92 4.00e-54 202.00
IUUC-Mlu-068236 Myotis lucifugus 44.81 1.00e-52 197.00
IUUC-Nfi-068417 Neosartorya fischeri 44.54 4.00e-80 289.00
IUUC-Ncr-068747 Neurospora crassa 44.06 3.00e-65 239.00
IUUC-Nle-069948 Nomascus leucogenys 39.63 9.00e-49 185.00
IUUC-Opr-070919 Ochotona princeps 36.51 5.00e-41 159.00
IUUC-Ont-071467 Oreochromis niloticus 50.00 2.00e-55 206.00
IUUC-Oan-073436 Ornithorhynchus anatinus 40.27 5.00e-29 117.00
IUUC-Ocu-074427 Oryctolagus cuniculus 52.43 6.00e-54 202.00
IUUC-Oba-075440 Oryza barthii 41.91 1.00e-53 201.00
IUUC-Obr-076275 Oryza brachyantha 47.25 2.00e-52 197.00
IUUC-Ogl-077237 Oryza glaberrima 41.91 1.00e-53 201.00
IUUC-Ogu-078934 Oryza glumaepatula 41.91 9.00e-54 201.00
IUUC-Oin-079475 Oryza indica 41.91 3.00e-54 203.00
IUUC-Olo-080285 Oryza longistaminata 48.55 1.00e-48 183.00
IUUC-Ome-081887 Oryza meridionalis 41.49 5.00e-53 199.00
IUUC-Oni-082064 Oryza nivara 41.49 2.00e-53 200.00
IUUC-Opu-083610 Oryza punctata 42.32 1.00e-54 204.00
IUUC-Oru-084911 Oryza rufipogon 41.49 2.00e-53 200.00
IUUC-Osa-085366 Oryza sativa 41.91 1.00e-53 201.00
IUUC-Ola-086846 Oryzias latipes 39.18 2.00e-49 187.00
IUUC-Olu-087879 Ostreococcus lucimarinus 51.37 5.00e-50 189.00
IUUC-Oga-089017 Otolemur garnettii 51.60 2.00e-52 197.00
IUUC-Oar-089970 Ovis aries 46.32 2.00e-54 203.00
IUUC-Ptr-091147 Pan troglodytes 40.08 2.00e-49 187.00
IUUC-Pan-091757 Papio anubis 39.52 1.00e-41 161.00
IUUC-Psi-093931 Pelodiscus sinensis 44.87 2.00e-55 206.00
IUUC-Pno-094775 Phaeosphaeria nodorum 39.83 8.00e-67 245.00
IUUC-Ppa-095156 Physcomitrella patens 45.90 3.00e-49 186.00
IUUC-Pfo-097295 Poecilia formosa 40.07 7.00e-55 205.00
IUUC-Pab-098537 Pongo abelii 45.92 4.00e-54 202.00
IUUC-Pop-099436 Populus trichocarpa 38.31 1.00e-51 194.00
IUUC-Pca-100631 Procavia capensis 42.15 3.00e-44 170.00
IUUC-Ppe-101259 Prunus persica 42.31 2.00e-56 210.00
IUUC-Pva-102679 Pteropus vampyrus 47.09 2.00e-50 190.00
IUUC-Pgr-103475 Puccinia graminis 44.33 3.00e-43 167.00
IUUC-Ptt-104012 Puccinia triticina 29.56 7.00e-27 112.00
IUUC-Pte-104071 Pyrenophora teres 41.29 2.00e-72 263.00
IUUC-Pyt-104501 Pyrenophora triticirepentis 41.29 2.00e-72 263.00
IUUC-Rno-104858 Rattus norvegicus 44.87 6.00e-54 202.00
IUUC-Sce-106174 Saccharomyces cerevisiae 45.31 2.00e-72 264.00
IUUC-Sha-107075 Sarcophilus harrisii 46.75 3.00e-56 209.00
IUUC-Sja-107663 Schizosaccharomyces japonicus 61.49 9.00e-121 424.00
IUUC-Ssl-108473 Sclerotinia sclerotiorum 42.90 1.00e-59 221.00
IUUC-Smo-109290 Selaginella moellendorffii 47.54 2.00e-49 186.00
IUUC-Sit-109876 Setaria italica 48.09 5.00e-54 202.00
IUUC-Sly-110858 Solanum lycopersicum 47.03 7.00e-52 195.00
IUUC-Stu-112129 Solanum tuberosum 46.49 5.00e-52 195.00
IUUC-Sar-113061 Sorex araneus 52.43 6.00e-54 202.00
IUUC-Sbi-114882 Sorghum bicolor 40.93 2.00e-52 197.00
IUUC-Sre-115104 Sporisorium reilianum 35.36 3.00e-54 203.00
IUUC-Ssc-115403 Sus scrofa 44.87 8.00e-55 205.00
IUUC-Tgu-117013 Taeniopygia guttata 45.73 3.00e-56 209.00
IUUC-Tru-118307 Takifugu rubripes 51.28 7.00e-54 202.00
IUUC-Tsy-119309 Tarsius syrichta 54.65 8.00e-26 108.00
IUUC-Tni-120209 Tetraodon nigroviridis 51.53 1.00e-54 204.00
IUUC-Tca-121421 Theobroma cacao 41.88 6.00e-56 208.00
IUUC-Tre-122235 Trichoderma reesei 41.24 6.00e-70 255.00
IUUC-Tvi-122421 Trichoderma virens 43.79 2.00e-69 254.00
IUUC-Tae-124587 Triticum aestivum 47.54 2.00e-53 200.00
IUUC-Tur-126353 Triticum urartu 36.84 6.00e-23 100.00
IUUC-Tme-126918 Tuber melanosporum 45.42 3.00e-68 250.00
IUUC-Ttr-129286 Tursiops truncatus 44.86 2.00e-48 184.00
IUUC-Uma-129404 Ustilago maydis 35.28 2.00e-53 201.00
IUUC-Vda-129746 Verticillium dahliae 39.29 1.00e-67 248.00
IUUC-Vpa-130648 Vicugna pacos 27.96 8.00e-05 38.90
IUUC-Vvi-131301 Vitis vinifera 47.54 1.00e-53 201.00
IUUC-Xtr-132583 Xenopus tropicalis 45.02 7.00e-55 205.00
IUUC-Xma-133129 Xiphophorus maculatus 45.89 9.00e-55 204.00
IUUC-Yli-134515 Yarrowia lipolytica 47.21 5.00e-66 242.00
IUUC-Zma-135398 Zea mays 48.09 7.00e-54 201.00
Created Date 25-Jun-2017

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