iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003406

Ensembl Protein ID

ENSAPLP00000015426.1

UniProt Accession

U3J7E9; U3J7E9_ANAPL

Genbank Protein ID

ENSAPLP00000015426

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01014554

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000015475.1	ENSAPLT00000016223.1	ENSAPLP00000015426.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.90e-16	57.6	321	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C s
   Q: 321  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCVS 366
           79*********....9******************.*******7.******75 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

VQKKKKSKKL KDSKAAKIKR RKKEALSRSR SLGEAFGSND EISDNEEEIE EKSESEGSDY 60
SPWSIRNSSS NPARDGLSSR ALKHSLAFLL ADENLQEPKS SAQLMEEWGL DDVDYIFSEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCAGAAAA AAAAGAAATC CAAGAAGCTG AAAGACAGCA AGGCTGCCAA AATCAAGAGG 60
AGGAAGAAAG AGGTAACGCT GCGTGCTCAG AAATGAGGCT GGCGGGTTCC TGCTAGGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	80.82	0.00e+00	2512.00
IUUC-Aca-004671	Anolis carolinensis	77.28	0.00e+00	2438.00
IUUC-Aly-005645	Arabidopsis lyrata	39.09	3.00e-148	520.00
IUUC-Ath-007406	Arabidopsis thaliana	40.11	2.00e-152	534.00
IUUC-Ame-011883	Astyanax mexicanus	76.83	0.00e+00	1952.00
IUUC-Bta-012951	Bos taurus	81.65	0.00e+00	2336.00
IUUC-Bol-016073	Brassica oleracea	40.89	1.00e-152	534.00
IUUC-Bra-016724	Brassica rapa	41.24	4.00e-154	539.00
IUUC-Cja-018871	Callithrix jacchus	75.63	0.00e+00	2295.00
IUUC-Cfa-021063	Canis familiaris	80.91	0.00e+00	2487.00
IUUC-Cpo-022083	Cavia porcellus	81.66	0.00e+00	2542.00
IUUC-Csa-023084	Chlorocebus sabaeus	82.04	0.00e+00	2587.00
IUUC-Eca-034372	Equus caballus	81.98	0.00e+00	2531.00
IUUC-Fca-036048	Felis catus	80.80	0.00e+00	2491.00
IUUC-Fal-037282	Ficedula albicollis	84.45	0.00e+00	2645.00
IUUC-Gga-040607	Gallus gallus	87.57	0.00e+00	2287.00
IUUC-Ggo-044514	Gorilla gorilla	81.85	0.00e+00	2571.00
IUUC-Hsa-046181	Homo sapiens	82.02	0.00e+00	2567.00
IUUC-Loc-052795	Lepisosteus oculatus	76.91	0.00e+00	2422.00
IUUC-Laf-053749	Loxodonta africana	84.33	0.00e+00	2157.00
IUUC-Mcc-055856	Macaca mulatta	81.98	0.00e+00	2586.00
IUUC-Meu-056050	Macropus eugenii	79.69	0.00e+00	726.00
IUUC-Mga-059630	Meleagris gallopavo	86.87	0.00e+00	2683.00
IUUC-Mmr-060986	Microcebus murinus	80.78	0.00e+00	2476.00
IUUC-Mmu-063644	Mus musculus	81.15	0.00e+00	2548.00
IUUC-Mpu-066528	Mustela putorius furo	79.76	0.00e+00	2502.00
IUUC-Nle-069824	Nomascus leucogenys	79.16	0.00e+00	2326.00
IUUC-Ont-072647	Oreochromis niloticus	72.05	0.00e+00	2321.00
IUUC-Oan-072885	Ornithorhynchus anatinus	81.98	0.00e+00	1724.00
IUUC-Ola-086961	Oryzias latipes	73.76	0.00e+00	2141.00
IUUC-Oga-088775	Otolemur garnettii	81.56	0.00e+00	2513.00
IUUC-Oar-090301	Ovis aries	80.94	0.00e+00	2471.00
IUUC-Ptr-090586	Pan troglodytes	80.82	0.00e+00	2533.00
IUUC-Pan-092282	Papio anubis	82.00	0.00e+00	2589.00
IUUC-Psi-093007	Pelodiscus sinensis	79.40	0.00e+00	2137.00
IUUC-Pab-097677	Pongo abelii	84.76	0.00e+00	2088.00
IUUC-Pca-100559	Procavia capensis	79.39	0.00e+00	1967.00
IUUC-Rno-105378	Rattus norvegicus	80.93	0.00e+00	2516.00
IUUC-Sha-107350	Sarcophilus harrisii	75.29	0.00e+00	2329.00
IUUC-Smo-108946	Selaginella moellendorffii	38.65	6.00e-152	532.00
IUUC-Ssc-116303	Sus scrofa	79.97	0.00e+00	2109.00
IUUC-Tgu-116779	Taeniopygia guttata	83.35	0.00e+00	2491.00
IUUC-Tru-117597	Takifugu rubripes	74.39	0.00e+00	2182.00
IUUC-Ttr-128301	Tursiops truncatus	82.12	0.00e+00	2544.00
IUUC-Vpa-130209	Vicugna pacos	88.89	5.00e-164	572.00
IUUC-Xtr-132668	Xenopus tropicalis	78.26	0.00e+00	2314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence