iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000000747.6	ENSGALT00000023340.5	ENSGALP00000023295.5
ENSGALG00000000747.6	ENSGALT00000059482.1	ENSGALP00000057658.1
ENSGALG00000000747.6	ENSGALT00000082934.1	ENSGALP00000048091.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.20e-08	34.5	2	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 2    EFCRVCKDGGE----LLCCDTCPSSYHLHCLNPP-LPEIPNGE-WLCPRCT 46
           58*********....*******************.*******8.******6 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MEFCRVCKDG GELLCCDTCP SSYHLHCLNP PLPEIPNGEW LCPRCTCPPL KGKVQRILHW 60
AWKEPPAPLP SALPAPDAEL ALPLPKVLEG IPEREFFVKW AGLSYWHCSW VKELQLELYH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCAGGTGT GAAGAAGAAA ATCAAGAGCT CAAAAGATGG GAAGAAAAAG GGGAAGGGAA 60
AAAAGATGGC AGGCCTAAAA TTCCGGTTTG GAGGAATCCC CAGCAAAAGG AAAAAGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	87.88	0.00e+00	2305.00
IUUC-Apl-003406	Anas platyrhynchos	87.30	0.00e+00	2246.00
IUUC-Aca-004671	Anolis carolinensis	86.18	0.00e+00	2268.00
IUUC-Aly-005645	Arabidopsis lyrata	38.72	7.00e-151	529.00
IUUC-Ath-007406	Arabidopsis thaliana	39.38	2.00e-155	543.00
IUUC-Bta-012951	Bos taurus	86.18	0.00e+00	2237.00
IUUC-Bol-016073	Brassica oleracea	40.84	2.00e-155	544.00
IUUC-Bra-016724	Brassica rapa	41.18	6.00e-157	549.00
IUUC-Cja-018871	Callithrix jacchus	84.66	0.00e+00	2121.00
IUUC-Cfa-021063	Canis familiaris	88.90	0.00e+00	2296.00
IUUC-Cpo-022083	Cavia porcellus	88.70	0.00e+00	2306.00
IUUC-Csa-023084	Chlorocebus sabaeus	89.18	0.00e+00	2372.00
IUUC-Eca-034372	Equus caballus	88.90	0.00e+00	2297.00
IUUC-Fca-036048	Felis catus	88.70	0.00e+00	2289.00
IUUC-Fal-037282	Ficedula albicollis	94.21	0.00e+00	2462.00
IUUC-Ggo-044514	Gorilla gorilla	89.32	0.00e+00	2381.00
IUUC-Hsa-046181	Homo sapiens	89.25	0.00e+00	2375.00
IUUC-Loc-052795	Lepisosteus oculatus	80.63	0.00e+00	2217.00
IUUC-Laf-053749	Loxodonta africana	89.18	0.00e+00	2355.00
IUUC-Mcc-055856	Macaca mulatta	89.11	0.00e+00	2372.00
IUUC-Meu-056050	Macropus eugenii	76.74	0.00e+00	1083.00
IUUC-Mga-059630	Meleagris gallopavo	99.10	0.00e+00	2639.00
IUUC-Mmr-060986	Microcebus murinus	87.80	0.00e+00	2313.00
IUUC-Mmu-063644	Mus musculus	88.63	0.00e+00	2339.00
IUUC-Mpu-066528	Mustela putorius furo	84.37	0.00e+00	2298.00
IUUC-Nle-069824	Nomascus leucogenys	87.04	0.00e+00	2306.00
IUUC-Oan-072885	Ornithorhynchus anatinus	69.59	0.00e+00	1706.00
IUUC-Oga-088775	Otolemur garnettii	88.77	0.00e+00	2323.00
IUUC-Oar-090301	Ovis aries	87.68	0.00e+00	2266.00
IUUC-Ptr-090586	Pan troglodytes	89.11	0.00e+00	2366.00
IUUC-Pan-092282	Papio anubis	89.18	0.00e+00	2370.00
IUUC-Psi-093007	Pelodiscus sinensis	88.69	0.00e+00	2067.00
IUUC-Pfo-096802	Poecilia formosa	77.22	0.00e+00	1998.00
IUUC-Pab-097677	Pongo abelii	93.94	0.00e+00	2013.00
IUUC-Pca-100559	Procavia capensis	84.29	0.00e+00	2170.00
IUUC-Rno-105378	Rattus norvegicus	88.35	0.00e+00	2307.00
IUUC-Sha-107350	Sarcophilus harrisii	84.32	0.00e+00	2207.00
IUUC-Smo-108946	Selaginella moellendorffii	39.11	8.00e-157	548.00
IUUC-Ssc-116303	Sus scrofa	88.44	0.00e+00	2168.00
IUUC-Tgu-116779	Taeniopygia guttata	85.56	0.00e+00	2196.00
IUUC-Ttr-128301	Tursiops truncatus	86.97	0.00e+00	2291.00
IUUC-Vpa-130209	Vicugna pacos	89.16	1.00e-164	574.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence