iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109134

Ensembl Protein ID

EFJ17413

UniProt Accession

D8SDW4; D8SDW4_SELML

Genbank Protein ID

EFJ17413.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377614

Gene Name

SELMODRAFT_421024

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_421024	EFJ17413	EFJ17413

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-32	111.3	704	735
UBD/Beta-Prp	1.20e-50	173.1	412	735

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ +t++++ +d ++l+s s+D  i +W l
   Q: 704  GHAEVITGMSWlPDcKHLISVSGDSCIFIWKL 735
           8***********999***************96 PP

UBD/Beta-Prp

   S: 22   ksllatgsrdgtikvwdvttgkllrsl.sgheae.................................vtavkfspdgkilvtgseDrtikvwdlstgkcvh 88
           ++ +at s+dg+i++w+v + k +++   +++a                                   +a++ s dgk+l++g + ++++v+dl t+++v+
   Q: 412  GECFATCSADGSIRLWNVGPDKDVSQAvASKSANvyckdilgvlytdvkdilrpseqdvdsqdssqgFRAISVSADGKYLASGDRSGNLRVYDLMTFEMVS 512
           6889***************988866553444444777777777777777788888888888888888********************************** PP
   S: 89   tlkghedsvlslsfsp........sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.....t 176
             ++h++++lslsfs+        +   l+sG++dr ++++d++ + ++ etl+ h++++++v++ + g  l s+s+D+ v +  +++++  ++      +
   Q: 513  FQEAHDAEILSLSFSAgfqtrseeQMPLLASGGRDRLVHMYDVNRNFEVIETLDDHSASITGVKFACGGTRLLSCSADKSVVFRHIESKDGCTRSsryhqE 613
           ***********99999888888744499****************9999999****************99************98889777755555244443 PP
   S: 177  gghtdsvyslsfdsngkelvsgs...ldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
            +  + +y +++++n k++v++    +d++v++ +l tg+ vr  +  +d+     vr++p ++++++  sD+ ir++d  sg+ll+  ++h++ ++ ++ 
   Q: 614  VALRGTIYDMDLHPNEKFVVTAEqllQDKKVNILNLTTGKPVRNIKPESDFGEpiKVRVDPSGTFVLCSHSDKCIRLYDFASGELLTHASGHAEVITGMSW 714
           334689***************984446********************9966541167888*********************************99999988 PP
   S: 273  lsfgdnvlvlgsedskvniwkl 294
             ++ ++l+++s+ds++ iwkl
   Q: 715  -LPDCKHLISVSGDSCIFIWKL 735
           .8999****************8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MRLLRRKIKK TDANGRIELE RVIGLTVTNA SGLATNAATG EVAYIAGCVV VIYNPKTNTQ 60
SRFLIANRTP KAVSCVAYSY HGGKLVAAGE SGHQPAVIIW DSISGQCMIE LKTHKIGISC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCTGC TCCGGCGGAA GATCAAGAAG ACAGACGCCA ATGGCAGGGT AGGGCTTGCT 60
TTCCAGCTGA GAGATTTCTT GTGTTGTCTC AATATTTCGC TGGCAGATCG AGCTGGAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_421024

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001371	Ailuropoda melanoleuca	37.63	2.00e-134	473.00
IUUC-Atr-003165	Amborella trichopoda	39.61	0.00e+00	747.00
IUUC-Apl-003236	Anas platyrhynchos	35.63	3.00e-133	469.00
IUUC-Aca-004486	Anolis carolinensis	36.28	5.00e-125	442.00
IUUC-Aly-006434	Arabidopsis lyrata	36.08	2.00e-105	376.00
IUUC-Ath-007624	Arabidopsis thaliana	37.09	4.00e-156	545.00
IUUC-Afu-008757	Aspergillus fumigatus	22.49	6.00e-34	139.00
IUUC-Ang-009797	Aspergillus niger	21.76	3.00e-19	90.10
IUUC-Ame-010799	Astyanax mexicanus	34.49	8.00e-138	484.00
IUUC-Bta-013336	Bos taurus	35.23	2.00e-135	476.00
IUUC-Bol-016347	Brassica oleracea	37.12	5.00e-154	538.00
IUUC-Bra-017959	Brassica rapa	39.42	2.00e-153	536.00
IUUC-Cja-018986	Callithrix jacchus	35.20	3.00e-132	466.00
IUUC-Cfa-020529	Canis familiaris	37.05	8.00e-134	471.00
IUUC-Cpo-021348	Cavia porcellus	35.26	3.00e-130	459.00
IUUC-Csa-023118	Chlorocebus sabaeus	35.42	9.00e-131	461.00
IUUC-Cho-024310	Choloepus hoffmanni	35.50	4.00e-81	295.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	23.31	2.00e-26	113.00
IUUC-Dre-027495	Danio rerio	35.91	7.00e-132	464.00
IUUC-Dno-029772	Dasypus novemcinctus	35.22	2.00e-131	462.00
IUUC-Dor-030615	Dipodomys ordii	35.78	4.00e-131	462.00
IUUC-Dme-032179	Drosophila melanogaster	33.25	4.00e-127	449.00
IUUC-Ete-033108	Echinops telfairi	35.09	3.00e-127	449.00
IUUC-Eca-033675	Equus caballus	37.97	2.00e-134	473.00
IUUC-Eeu-035189	Erinaceus europaeus	33.29	5.00e-115	408.00
IUUC-Fca-035826	Felis catus	36.99	7.00e-134	471.00
IUUC-Fal-037354	Ficedula albicollis	35.54	9.00e-133	468.00
IUUC-Gmo-039644	Gadus morhua	35.01	4.00e-110	392.00
IUUC-Gac-042491	Gasterosteus aculeatus	35.06	2.00e-113	403.00
IUUC-Gma-043644	Glycine max	39.53	3.00e-163	568.00
IUUC-Ggo-045152	Gorilla gorilla	37.03	5.00e-132	465.00
IUUC-Hsa-045891	Homo sapiens	36.60	7.00e-133	468.00
IUUC-Itr-048210	Ictidomys tridecemlineatus	35.99	1.00e-130	460.00
IUUC-Lch-049450	Latimeria chalumnae	33.96	5.00e-116	412.00
IUUC-Loc-052784	Lepisosteus oculatus	35.89	3.00e-130	459.00
IUUC-Laf-053992	Loxodonta africana	37.03	2.00e-133	470.00
IUUC-Mcc-054994	Macaca mulatta	37.03	6.00e-132	465.00
IUUC-Meu-056200	Macropus eugenii	33.98	3.00e-111	396.00
IUUC-Mtr-058383	Medicago truncatula	37.58	4.00e-82	297.00
IUUC-Mga-059325	Meleagris gallopavo	34.72	2.00e-130	459.00
IUUC-Mmr-060693	Microcebus murinus	37.47	3.00e-134	472.00
IUUC-Mdo-063007	Monodelphis domestica	36.36	2.00e-132	467.00
IUUC-Mmu-064067	Mus musculus	37.43	8.00e-136	478.00
IUUC-Mpu-066532	Mustela putorius furo	37.70	6.00e-134	471.00
IUUC-Mlu-066982	Myotis lucifugus	37.28	3.00e-131	462.00
IUUC-Nfi-068613	Neosartorya fischeri	23.25	2.00e-35	144.00
IUUC-Nle-069578	Nomascus leucogenys	35.31	6.00e-131	461.00
IUUC-Opr-070397	Ochotona princeps	37.83	6.00e-136	478.00
IUUC-Ont-072247	Oreochromis niloticus	35.96	3.00e-133	469.00
IUUC-Oan-073644	Ornithorhynchus anatinus	33.60	1.00e-111	396.00
IUUC-Ocu-074274	Oryctolagus cuniculus	37.57	3.00e-135	476.00
IUUC-Ola-087185	Oryzias latipes	34.94	5.00e-122	432.00
IUUC-Oga-088733	Otolemur garnettii	35.47	8.00e-131	461.00
IUUC-Oar-089569	Ovis aries	35.14	6.00e-131	461.00
IUUC-Ptr-090553	Pan troglodytes	36.60	2.00e-132	466.00
IUUC-Pan-092735	Papio anubis	35.55	2.00e-132	466.00
IUUC-Psi-093457	Pelodiscus sinensis	35.39	2.00e-133	469.00
IUUC-Pma-094285	Petromyzon marinus	37.84	8.00e-132	463.00
IUUC-Ppa-095596	Physcomitrella patens	52.44	0.00e+00	1000.00
IUUC-Pfo-096375	Poecilia formosa	35.48	1.00e-122	434.00
IUUC-Pab-098510	Pongo abelii	36.90	1.00e-131	464.00
IUUC-Pop-099155	Populus trichocarpa	40.94	1.00e-168	586.00
IUUC-Pca-100959	Procavia capensis	34.66	4.00e-68	253.00
IUUC-Pva-102895	Pteropus vampyrus	37.30	2.00e-134	473.00
IUUC-Rno-105598	Rattus norvegicus	34.75	3.00e-135	476.00
IUUC-Sha-107013	Sarcophilus harrisii	36.13	2.00e-131	463.00
IUUC-Sly-110969	Solanum lycopersicum	38.96	3.00e-155	541.00
IUUC-Stu-112838	Solanum tuberosum	37.98	3.00e-92	332.00
IUUC-Sar-113261	Sorex araneus	37.38	2.00e-131	462.00
IUUC-Ssc-115317	Sus scrofa	35.05	3.00e-137	482.00
IUUC-Tgu-117055	Taeniopygia guttata	35.78	1.00e-130	460.00
IUUC-Tru-118280	Takifugu rubripes	35.58	1.00e-122	433.00
IUUC-Tsy-118799	Tarsius syrichta	31.52	7.00e-63	235.00
IUUC-Tni-120316	Tetraodon nigroviridis	36.17	1.00e-113	403.00
IUUC-Tca-121475	Theobroma cacao	37.79	2.00e-158	552.00
IUUC-Tre-122008	Trichoderma reesei	23.14	2.00e-28	120.00
IUUC-Tbe-128005	Tupaia belangeri	34.58	1.00e-97	351.00
IUUC-Ttr-128722	Tursiops truncatus	34.47	6.00e-114	405.00
IUUC-Vda-129957	Verticillium dahliae	25.00	1.00e-34	141.00
IUUC-Vvi-131035	Vitis vinifera	42.93	2.00e-179	622.00
IUUC-Xtr-132966	Xenopus tropicalis	36.24	4.00e-125	442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence