iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000004001.2	ENSLACT00000025255.1	ENSLACP00000022500.1
ENSLACG00000004001.2	ENSLACT00000004535.1	ENSLACP00000004496.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	9.30e-16	57.8	1	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgke.fel.evseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m+++v+t +gke  ++ ++s+ +++e l+ ki+++++v pe+q+L y Gk+L+D  tL ++++  +++v l+++ ++
   Q: 1    MWIQVRTIDGKEtQTIdDLSRLTKIECLRLKIQESFNVSPEKQRLFYRGKQLEDGHTLFDYNVGLNDIVQLLIRSQS 77
           89**********65558*******************************************************99876 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MWIQVRTIDG KETQTIDDLS RLTKIECLRL KIQESFNVSP EKQRLFYRGK QLEDGHTLFD 60
YNVGLNDIVQ LLIRSQSDTP TASGKKKETD VDSDNKTKRN PSSSSYSQPS TSARSFLIDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAAAGAGA AGAGGAAGCA AAAGAAAGCA ACCGGCGCTG TGACTTTACA GCAGAAGGTT 60
TTTTTTTTTT TTTTTTTTTT AAATATGCGT GTATGTATGT ATGTATATGT GTGTGCGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR014722--Rib_L2_dom2
IPR003105--SRA_YDG
IPR021991--TTD_dom
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50053--UBIQUITIN_2
PS51015--YDG
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF02182--SAD_SRA
PF12148--TTD
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00249--PHD
SM00466--SRA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024857	Choloepus hoffmanni	68.99	0.00e+00	683.00
IUUC-Ete-032375	Echinops telfairi	60.41	4.00e-93	335.00
IUUC-Meu-056189	Macropus eugenii	69.67	4.00e-154	538.00
IUUC-Opr-070219	Ochotona princeps	75.00	6.00e-114	404.00
IUUC-Ont-072019	Oreochromis niloticus	65.44	0.00e+00	708.00
IUUC-Pfo-097186	Poecilia formosa	65.31	0.00e+00	699.00
IUUC-Sar-113546	Sorex araneus	61.01	8.00e-90	324.00
IUUC-Tgu-116945	Taeniopygia guttata	82.57	0.00e+00	822.00
IUUC-Xtr-132771	Xenopus tropicalis	78.87	0.00e+00	775.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence