iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111631

Ensembl Protein ID

Solyc05g053130.2.1

UniProt Accession

K4C1Z3; K4C1Z3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g053130.2	Solyc05g053130.2.1	Solyc05g053130.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-10	39.7	153	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWDlrtgvll 36
           ++f    +  +l+sGs D+ +++WD +t  ++
   Q: 153  VRFhplyP-EILASGSLDHEVRLWDAKTAECI 183
           44444555.88**************9998886 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MRSSMSPDNL SSAPSTSRSS PPSAASQNVN CKHSNVFQLL TRREVAPRTK RASRKFWGEN 60
TKCTLDSYGL KRGVGSDARQ GLISWVEAES LQHLSAKYCS LLPPPRSTIA AAFSPDGRTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCCGACGC CGGAAAATCT AAATCCAAGT TACAGTACTT CTTCTTCTTC CCATATTTCC 60
ATCGCCCTTC TTCCCGTTTT GCCCCTCTGC AGGATCTCGA CACCGTCGGC GTCATCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0006914--P:autophagy

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004419	Anolis carolinensis	34.59	1.00e-31	131.00
IUUC-Ame-011354	Astyanax mexicanus	34.44	7.00e-29	122.00
IUUC-Bdi-014580	Brachypodium distachyon	46.71	1.00e-100	360.00
IUUC-Cin-025567	Ciona intestinalis	38.79	2.00e-22	100.00
IUUC-Dre-028120	Danio rerio	35.92	1.00e-29	125.00
IUUC-Gmo-039343	Gadus morhua	39.77	1.00e-28	121.00
IUUC-Gga-040787	Gallus gallus	33.59	3.00e-31	129.00
IUUC-Gac-041321	Gasterosteus aculeatus	35.98	2.00e-28	121.00
IUUC-Mga-059401	Meleagris gallopavo	35.68	3.00e-31	130.00
IUUC-Ont-071277	Oreochromis niloticus	38.42	2.00e-28	120.00
IUUC-Ogl-077411	Oryza glaberrima	55.43	6.00e-108	384.00
IUUC-Opu-084041	Oryza punctata	47.12	4.00e-108	384.00
IUUC-Oru-085075	Oryza rufipogon	47.24	1.00e-108	387.00
IUUC-Ola-086729	Oryzias latipes	35.68	4.00e-29	123.00
IUUC-Pma-094563	Petromyzon marinus	40.32	5.00e-28	117.00
IUUC-Pfo-097365	Poecilia formosa	36.02	1.00e-27	118.00
IUUC-Smo-108871	Selaginella moellendorffii	65.53	6.00e-92	331.00
IUUC-Tru-118308	Takifugu rubripes	36.19	1.00e-28	121.00
IUUC-Xtr-132247	Xenopus tropicalis	38.12	5.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence