iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122580

Ensembl Protein ID

EHK27206

UniProt Accession

G9MDP7; G9MDP7_HYPVG

Genbank Protein ID

EHK27206.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

ABDF02000001

Gene Name

TRIVIDRAFT_85815

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_85815	EHK27206	EHK27206

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	33.57	4.00e-30	129.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Trichoderma virens

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAATERFLH LARPLAHTNI GLQTNIAPLT VQIQPQAVLS ILDHAVRRDV RENSQSTRVI 60
GALVGTRSED GTEVEVRSCF AIPHTEEEDQ VEVDVEYQKN MLALVLKASP RESLLGWYTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTGGAGA CTATCGCGAG GAAAAAAGAA AGAGAGCCAG TTTTCGAGAG AGCCGGCGCC 60
ACTCGTTTTT TTCTTCTCCC CTTCCCACCC CCACTCTTCG ACCTTGTCAT ACGCATCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	30.33	1.00e-27	115.00
IUUC-Aml-001527	Ailuropoda melanoleuca	33.57	9.00e-38	149.00
IUUC-Atr-002686	Amborella trichopoda	30.60	1.00e-24	104.00
IUUC-Apl-003977	Anas platyrhynchos	32.46	6.00e-34	135.00
IUUC-Aca-004335	Anolis carolinensis	31.41	6.00e-36	142.00
IUUC-Aly-005945	Arabidopsis lyrata	31.65	5.00e-30	122.00
IUUC-Ath-007045	Arabidopsis thaliana	30.94	3.00e-29	120.00
IUUC-Acl-008365	Aspergillus clavatus	63.31	2.00e-114	403.00
IUUC-Afl-008742	Aspergillus flavus	62.99	8.00e-109	385.00
IUUC-Afu-009030	Aspergillus fumigatus	64.29	9.00e-117	411.00
IUUC-Ani-009212	Aspergillus nidulans	64.61	3.00e-116	409.00
IUUC-Ang-009712	Aspergillus niger	63.31	6.00e-114	402.00
IUUC-Aor-009885	Aspergillus oryzae	63.31	2.00e-116	410.00
IUUC-Ate-010315	Aspergillus terreus	64.94	2.00e-110	390.00
IUUC-Ame-010801	Astyanax mexicanus	28.01	6.00e-23	99.40
IUUC-Bgr-011982	Blumeria graminis	69.35	9.00e-128	447.00
IUUC-Bta-012804	Bos taurus	33.57	8.00e-38	149.00
IUUC-Bci-013891	Botrytis cinerea	74.52	8.00e-129	451.00
IUUC-Bdi-014328	Brachypodium distachyon	29.23	2.00e-26	110.00
IUUC-Bol-015446	Brassica oleracea	32.27	4.00e-32	129.00
IUUC-Bra-016862	Brassica rapa	32.27	7.00e-32	129.00
IUUC-Cel-018171	Caenorhabditis elegans	26.37	6.00e-26	109.00
IUUC-Cja-019335	Callithrix jacchus	33.57	9.00e-38	149.00
IUUC-Cfa-020138	Canis familiaris	33.45	6.00e-38	149.00
IUUC-Cpo-022109	Cavia porcellus	31.34	2.00e-31	128.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	30.90	8.00e-36	142.00
IUUC-Csa-023994	Chlorocebus sabaeus	33.45	8.00e-38	149.00
IUUC-Cho-024351	Choloepus hoffmanni	25.63	1.00e-16	79.00
IUUC-Cin-025801	Ciona intestinalis	29.68	2.00e-38	150.00
IUUC-Csv-025805	Ciona savignyi	29.33	7.00e-36	142.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	82.47	6.00e-152	528.00
IUUC-Cne-026868	Cryptococcus neoformans	32.26	4.00e-41	159.00
IUUC-Cme-027328	Cyanidioschyzon merolae	23.34	2.00e-12	65.10
IUUC-Dre-028085	Danio rerio	32.97	4.00e-39	153.00
IUUC-Dno-030099	Dasypus novemcinctus	33.09	2.00e-37	147.00
IUUC-Dor-030324	Dipodomys ordii	28.78	7.00e-26	109.00
IUUC-Dse-031314	Dothistroma septosporum	63.49	1.00e-112	397.00
IUUC-Dme-031926	Drosophila melanogaster	28.01	1.00e-31	128.00
IUUC-Ete-032569	Echinops telfairi	32.01	9.00e-34	135.00
IUUC-Eca-033502	Equus caballus	33.09	5.00e-36	143.00
IUUC-Eeu-034883	Erinaceus europaeus	31.58	2.00e-09	53.90
IUUC-Fca-035873	Felis catus	33.45	9.00e-38	149.00
IUUC-Fal-036921	Ficedula albicollis	33.33	4.00e-40	156.00
IUUC-Fox-037765	Fusarium oxysporum	86.54	1.00e-155	540.00
IUUC-Fso-038240	Fusarium solani	87.82	8.00e-158	547.00
IUUC-Gmo-038864	Gadus morhua	34.30	2.00e-40	157.00
IUUC-Ggr-039862	Gaeumannomyces graminis	72.67	7.00e-129	451.00
IUUC-Gga-040952	Gallus gallus	33.69	4.00e-40	156.00
IUUC-Gac-041677	Gasterosteus aculeatus	33.21	5.00e-40	155.00
IUUC-Gma-043061	Glycine max	31.21	7.00e-25	105.00
IUUC-Ggo-045591	Gorilla gorilla	33.57	1.00e-37	149.00
IUUC-Hsa-046860	Homo sapiens	33.45	8.00e-38	149.00
IUUC-Hvu-047410	Hordeum vulgare	26.71	1.00e-13	67.40
IUUC-Itr-048211	Ictidomys tridecemlineatus	33.45	9.00e-38	149.00
IUUC-Lch-049410	Latimeria chalumnae	38.73	7.00e-22	95.50
IUUC-Lpe-051102	Leersia perrieri	30.77	2.00e-27	114.00
IUUC-Loc-052016	Lepisosteus oculatus	29.29	2.00e-26	111.00
IUUC-Lma-053157	Leptosphaeria maculans	62.01	1.00e-114	404.00
IUUC-Laf-054568	Loxodonta africana	33.09	2.00e-37	148.00
IUUC-Mcc-054613	Macaca mulatta	33.57	9.00e-38	149.00
IUUC-Meu-056832	Macropus eugenii	26.56	2.00e-11	60.80
IUUC-Mor-057104	Magnaporthe oryzae	73.63	7.00e-138	481.00
IUUC-Mtr-058445	Medicago truncatula	30.58	6.00e-34	135.00
IUUC-Mla-059038	Melampsora laricipopulina	33.99	5.00e-40	156.00
IUUC-Mga-059548	Meleagris gallopavo	32.92	3.00e-35	140.00
IUUC-Mvi-060520	Microbotryum violaceum	30.26	8.00e-28	115.00
IUUC-Mdo-062376	Monodelphis domestica	32.97	1.00e-38	151.00
IUUC-Mmu-063254	Mus musculus	33.45	9.00e-38	149.00
IUUC-Mac-065635	Musa acuminata	30.24	4.00e-29	119.00
IUUC-Mpu-066314	Mustela putorius furo	33.45	7.00e-38	149.00
IUUC-Mlu-067512	Myotis lucifugus	33.57	2.00e-37	148.00
IUUC-Nfi-068262	Neosartorya fischeri	63.96	3.00e-116	409.00
IUUC-Ncr-068872	Neurospora crassa	73.55	1.00e-123	434.00
IUUC-Nle-070118	Nomascus leucogenys	33.57	1.00e-37	149.00
IUUC-Opr-071228	Ochotona princeps	32.38	2.00e-33	134.00
IUUC-Ont-072600	Oreochromis niloticus	32.73	2.00e-39	154.00
IUUC-Oan-073584	Ornithorhynchus anatinus	32.91	5.00e-34	135.00
IUUC-Ocu-074542	Oryctolagus cuniculus	33.45	5.00e-38	150.00
IUUC-Oba-075923	Oryza barthii	30.36	4.00e-29	119.00
IUUC-Obr-076313	Oryza brachyantha	31.15	1.00e-29	121.00
IUUC-Ogl-076932	Oryza glaberrima	30.36	4.00e-29	119.00
IUUC-Ogu-078152	Oryza glumaepatula	30.36	4.00e-29	119.00
IUUC-Oin-079528	Oryza indica	30.36	4.00e-29	119.00
IUUC-Olo-080401	Oryza longistaminata	30.36	4.00e-29	119.00
IUUC-Ome-081553	Oryza meridionalis	30.36	3.00e-29	120.00
IUUC-Oni-082090	Oryza nivara	30.25	2.00e-29	120.00
IUUC-Opu-083583	Oryza punctata	31.15	1.00e-28	118.00
IUUC-Oru-084492	Oryza rufipogon	30.36	4.00e-29	119.00
IUUC-Osa-085383	Oryza sativa	30.36	4.00e-29	119.00
IUUC-Ola-086835	Oryzias latipes	32.49	5.00e-39	152.00
IUUC-Olu-087716	Ostreococcus lucimarinus	25.91	6.00e-20	89.40
IUUC-Oga-088886	Otolemur garnettii	33.57	5.00e-38	149.00
IUUC-Oar-090079	Ovis aries	33.57	7.00e-38	149.00
IUUC-Ptr-091457	Pan troglodytes	33.45	8.00e-38	149.00
IUUC-Pan-092317	Papio anubis	27.37	6.00e-16	75.90
IUUC-Psi-093129	Pelodiscus sinensis	32.05	2.00e-35	141.00
IUUC-Pma-094488	Petromyzon marinus	32.97	1.00e-40	158.00
IUUC-Pno-095049	Phaeosphaeria nodorum	63.61	5.00e-117	412.00
IUUC-Ppa-095341	Physcomitrella patens	29.00	4.00e-39	153.00
IUUC-Pfo-096286	Poecilia formosa	32.52	3.00e-40	157.00
IUUC-Pab-097765	Pongo abelii	33.45	8.00e-38	149.00
IUUC-Pop-099131	Populus trichocarpa	29.54	2.00e-30	124.00
IUUC-Pca-100524	Procavia capensis	25.94	5.00e-18	82.80
IUUC-Ppe-101934	Prunus persica	30.58	4.00e-36	143.00
IUUC-Pva-102577	Pteropus vampyrus	33.45	2.00e-37	147.00
IUUC-Pgr-103521	Puccinia graminis	30.82	1.00e-35	141.00
IUUC-Ptt-103773	Puccinia triticina	22.06	4.00e-08	50.40
IUUC-Pte-104304	Pyrenophora teres	62.99	3.00e-116	409.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	62.99	4.00e-116	409.00
IUUC-Rno-105717	Rattus norvegicus	33.45	9.00e-38	149.00
IUUC-Sha-107190	Sarcophilus harrisii	33.33	2.00e-37	148.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	42.95	7.00e-75	272.00
IUUC-Spo-108355	Schizosaccharomyces pombe	44.37	1.00e-76	278.00
IUUC-Smo-109374	Selaginella moellendorffii	32.01	2.00e-40	157.00
IUUC-Sit-110119	Setaria italica	30.22	5.00e-29	119.00
IUUC-Sly-111570	Solanum lycopersicum	25.77	2.00e-23	100.00
IUUC-Stu-112308	Solanum tuberosum	28.69	1.00e-28	118.00
IUUC-Sar-113515	Sorex araneus	52.17	4.60e-02	29.30
IUUC-Sbi-114605	Sorghum bicolor	29.86	1.00e-28	119.00
IUUC-Sre-114906	Sporisorium reilianum	40.92	1.00e-56	211.00
IUUC-Tgu-117087	Taeniopygia guttata	32.08	6.00e-34	135.00
IUUC-Tru-117700	Takifugu rubripes	33.57	5.00e-39	152.00
IUUC-Tni-120470	Tetraodon nigroviridis	33.57	1.00e-39	155.00
IUUC-Tca-121109	Theobroma cacao	29.54	1.00e-24	105.00
IUUC-Tre-122095	Trichoderma reesei	99.36	5.00e-177	611.00
IUUC-Tae-125129	Triticum aestivum	30.94	3.00e-30	124.00
IUUC-Tur-126658	Triticum urartu	29.35	4.00e-25	106.00
IUUC-Tme-127043	Tuber melanosporum	54.05	3.00e-98	349.00
IUUC-Tbe-127927	Tupaia belangeri	33.45	9.00e-38	149.00
IUUC-Ttr-129231	Tursiops truncatus	33.45	9.00e-38	149.00
IUUC-Uma-129578	Ustilago maydis	40.59	4.00e-56	209.00
IUUC-Vda-129730	Verticillium dahliae	80.65	2.00e-151	526.00
IUUC-Vpa-130677	Vicugna pacos	54.55	1.10e-01	29.30
IUUC-Vvi-130968	Vitis vinifera	29.89	1.00e-29	122.00
IUUC-Xtr-132203	Xenopus tropicalis	31.52	2.00e-38	150.00
IUUC-Xma-133972	Xiphophorus maculatus	32.73	8.00e-40	155.00
IUUC-Yli-134553	Yarrowia lipolytica	43.06	4.00e-60	223.00
IUUC-Zma-134941	Zea mays	29.89	3.00e-23	100.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence