iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068255

Ensembl Protein ID

CADNFIAP00007550

UniProt Accession

A1DGE3; A1DGE3_NEOFI

Genbank Protein ID

EAW18450.1

Protein Name

WD repeat protein

Genbank Nucleotide ID

DS027696

Gene Name

NFIA_084020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00007717	CADNFIAT00007717	CADNFIAP00007550

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-34	115.1	160	193
UBD/Beta-Prp	1.90e-53	180.7	25	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +v ++++ ++ +llvsGs D+++k WD+rt ++l
   Q: 160  DVKSCDWhPTkGLLVSGSKDHQVKFWDPRTTRCL 193
           5999****989*******************9997 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           g+ k++it+v ++p+++ l+tg+ +g   +w+ t  ++     + + + +a+vt++ +s++ ++l++g++ + ik w ++ +    +  +h d
   Q: 25   GKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFetvmDAHYDQLQAGVTSIAWSHSHDWLISGGQKGDIKYWRPNFNNVETIDDAHHD 117
           67899****************************9999944422333334567*************************66544444444588** PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
            v++l++sps+ k++s+s+d t++++d   ++    +l+gh+  v +  +hp++ llvsGs+D +v++Wd +t ++l+tl + h++ v+ + f
   Q: 118  AVRDLAWSPSDTKFLSASDDTTLKIFDFTARTADT-VLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTTRCLTTLHS-HKNTVTTTRF 208
           ********************************998.*********************************************9.*********9 PP
   S: 189  ds.ngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW.....d 250
           ++ n++ l++ s+d+t +++dl+  + + +l+gh+++++s+  +  ++ ++ +gs+Dgs++ +     +
   Q: 209  SRvNSNLLATSSRDQTARVFDLRMMRDICILRGHEKPISSLTWHpIHSSLISTGSEDGSLYHYlldepN 277
           8846799****************9999*****************77888888889****9987555555 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MLPPLARIHS PADTIPVRHL HQSIGKSKKP ITVVRWTPEG RRLLTGGHTG EFMLWNGTAF 60
NFETVMDAHY DQLQAGVTSI AWSHSHDWLI SGGQKGDIKY WRPNFNNVET IDDAHHDAVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTCCGC CGTTGGCGCG AATCCATTCT CCTGCAGATA CGATACCCGT ACGACACCTA 60
CATCAGTCAA TCGGTAAATC GAAGAAACCT ATCACAGTTG TGAGATGGAC GCCGGAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0000790--C:nuclear chromatin
GO:0031124--P:mRNA 3'-end processing

KEGG

nfi:NFIA_084020

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	39.95	2.00e-82	298.00
IUUC-Aml-001363	Ailuropoda melanoleuca	41.94	5.00e-87	314.00
IUUC-Atr-003030	Amborella trichopoda	42.05	1.00e-87	315.00
IUUC-Apl-003409	Anas platyrhynchos	41.71	5.00e-85	308.00
IUUC-Aca-004694	Anolis carolinensis	41.94	1.00e-86	313.00
IUUC-Aly-006063	Arabidopsis lyrata	39.95	3.00e-88	317.00
IUUC-Ath-006583	Arabidopsis thaliana	41.33	1.00e-87	315.00
IUUC-Ago-007805	Ashbya gossypii	43.66	5.00e-83	299.00
IUUC-Acl-008075	Aspergillus clavatus	89.23	0.00e+00	903.00
IUUC-Afl-008582	Aspergillus flavus	86.11	0.00e+00	875.00
IUUC-Afu-008817	Aspergillus fumigatus	94.00	0.00e+00	864.00
IUUC-Ani-009391	Aspergillus nidulans	86.33	0.00e+00	707.00
IUUC-Ang-009750	Aspergillus niger	97.01	1.00e-157	546.00
IUUC-Aor-010085	Aspergillus oryzae	86.30	0.00e+00	878.00
IUUC-Ate-010397	Aspergillus terreus	87.38	0.00e+00	867.00
IUUC-Ame-010741	Astyanax mexicanus	46.97	4.00e-53	201.00
IUUC-Bgr-012169	Blumeria graminis	66.41	3.00e-136	476.00
IUUC-Bta-013265	Bos taurus	41.94	1.00e-86	313.00
IUUC-Bci-013762	Botrytis cinerea	64.02	2.00e-154	537.00
IUUC-Bdi-014849	Brachypodium distachyon	42.34	3.00e-88	317.00
IUUC-Bol-015325	Brassica oleracea	40.43	5.00e-89	320.00
IUUC-Bra-017064	Brassica rapa	40.91	4.00e-90	323.00
IUUC-Cel-018378	Caenorhabditis elegans	42.06	3.00e-84	304.00
IUUC-Cja-019547	Callithrix jacchus	41.94	7.00e-87	314.00
IUUC-Cfa-020031	Canis familiaris	41.94	8.00e-87	313.00
IUUC-Cpo-021554	Cavia porcellus	41.94	2.00e-86	312.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	36.18	3.00e-52	197.00
IUUC-Csa-023146	Chlorocebus sabaeus	41.67	2.00e-86	312.00
IUUC-Cho-024679	Choloepus hoffmanni	40.83	8.00e-83	300.00
IUUC-Cin-025415	Ciona intestinalis	40.00	2.00e-77	282.00
IUUC-Csv-026003	Ciona savignyi	40.00	5.00e-77	280.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	66.75	2.00e-152	531.00
IUUC-Cne-026983	Cryptococcus neoformans	41.32	2.00e-78	285.00
IUUC-Cme-027147	Cyanidioschyzon merolae	42.77	9.00e-83	298.00
IUUC-Dre-028545	Danio rerio	41.94	7.00e-87	313.00
IUUC-Dno-029677	Dasypus novemcinctus	41.94	5.00e-87	314.00
IUUC-Dse-031371	Dothistroma septosporum	56.00	2.00e-123	434.00
IUUC-Dme-031663	Drosophila melanogaster	41.67	3.00e-83	301.00
IUUC-Ete-032511	Echinops telfairi	33.89	3.00e-63	235.00
IUUC-Eca-034152	Equus caballus	41.94	9.00e-87	313.00
IUUC-Fca-035820	Felis catus	41.94	8.00e-87	313.00
IUUC-Fox-037958	Fusarium oxysporum	66.22	1.00e-150	525.00
IUUC-Fso-038162	Fusarium solani	65.95	3.00e-150	523.00
IUUC-Gmo-039708	Gadus morhua	41.76	1.00e-86	313.00
IUUC-Ggr-040031	Gaeumannomyces graminis	64.50	3.00e-144	503.00
IUUC-Gga-040963	Gallus gallus	41.94	8.00e-87	313.00
IUUC-Gac-041541	Gasterosteus aculeatus	41.10	1.00e-83	303.00
IUUC-Gma-044352	Glycine max	43.01	1.00e-90	325.00
IUUC-Ggo-045564	Gorilla gorilla	41.94	6.00e-87	314.00
IUUC-Hsa-045833	Homo sapiens	41.94	8.00e-87	313.00
IUUC-Hvu-047848	Hordeum vulgare	39.66	3.00e-67	247.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	41.94	9.00e-87	313.00
IUUC-Kpa-049308	Komagataella pastoris	45.78	2.00e-97	347.00
IUUC-Lch-050525	Latimeria chalumnae	42.22	6.00e-87	314.00
IUUC-Lpe-051364	Leersia perrieri	36.77	1.00e-70	259.00
IUUC-Loc-052696	Lepisosteus oculatus	42.22	4.00e-87	315.00
IUUC-Lma-052951	Leptosphaeria maculans	61.87	7.00e-146	509.00
IUUC-Laf-053653	Loxodonta africana	41.94	2.00e-86	312.00
IUUC-Mcc-055797	Macaca mulatta	41.94	8.00e-87	313.00
IUUC-Meu-056331	Macropus eugenii	44.89	6.00e-73	267.00
IUUC-Mor-057168	Magnaporthe oryzae	58.06	5.00e-148	516.00
IUUC-Mpo-057510	Magnaporthe poae	60.62	4.00e-82	296.00
IUUC-Mtr-058032	Medicago truncatula	41.10	4.00e-88	317.00
IUUC-Mla-058852	Melampsora laricipopulina	43.92	9.00e-94	335.00
IUUC-Mga-059311	Meleagris gallopavo	41.94	1.00e-86	313.00
IUUC-Mvi-060544	Microbotryum violaceum	43.99	2.00e-92	331.00
IUUC-Mmr-061143	Microcebus murinus	41.94	9.00e-87	313.00
IUUC-Mdo-061977	Monodelphis domestica	41.94	1.00e-86	313.00
IUUC-Mmu-063922	Mus musculus	41.94	7.00e-87	314.00
IUUC-Mac-064961	Musa acuminata	40.95	2.00e-87	315.00
IUUC-Mpu-066079	Mustela putorius furo	42.21	9.00e-85	306.00
IUUC-Mlu-067247	Myotis lucifugus	41.94	6.00e-87	314.00
IUUC-Ncr-068909	Neurospora crassa	66.92	3.00e-153	533.00
IUUC-Nle-068994	Nomascus leucogenys	41.94	8.00e-87	314.00
IUUC-Opr-071079	Ochotona princeps	41.94	5.00e-87	314.00
IUUC-Ont-071971	Oreochromis niloticus	41.94	3.00e-86	311.00
IUUC-Oan-073135	Ornithorhynchus anatinus	41.94	2.00e-86	312.00
IUUC-Ocu-073982	Oryctolagus cuniculus	41.94	1.00e-86	313.00
IUUC-Oba-075297	Oryza barthii	37.05	1.00e-72	266.00
IUUC-Obr-076641	Oryza brachyantha	41.78	7.00e-87	313.00
IUUC-Ogl-077539	Oryza glaberrima	40.34	4.00e-67	247.00
IUUC-Ogu-078807	Oryza glumaepatula	37.05	1.00e-72	266.00
IUUC-Oin-079229	Oryza indica	41.78	4.00e-87	314.00
IUUC-Olo-080371	Oryza longistaminata	37.05	2.00e-72	265.00
IUUC-Ome-081149	Oryza meridionalis	36.77	7.00e-72	263.00
IUUC-Oni-082970	Oryza nivara	37.05	1.00e-72	266.00
IUUC-Opu-083415	Oryza punctata	37.05	9.00e-71	259.00
IUUC-Oru-085236	Oryza rufipogon	37.05	8.00e-73	266.00
IUUC-Ola-087421	Oryzias latipes	35.99	3.00e-86	310.00
IUUC-Olu-087821	Ostreococcus lucimarinus	38.68	2.00e-76	277.00
IUUC-Oga-088132	Otolemur garnettii	41.94	9.00e-87	313.00
IUUC-Oar-089513	Ovis aries	41.94	1.00e-86	313.00
IUUC-Ptr-090717	Pan troglodytes	41.94	7.00e-87	314.00
IUUC-Pan-092108	Papio anubis	41.94	7.00e-87	314.00
IUUC-Psi-093892	Pelodiscus sinensis	41.94	3.00e-86	312.00
IUUC-Pma-094561	Petromyzon marinus	42.50	3.00e-86	311.00
IUUC-Pno-094943	Phaeosphaeria nodorum	60.35	3.00e-139	487.00
IUUC-Ppa-095359	Physcomitrella patens	45.40	2.00e-91	328.00
IUUC-Pfo-096516	Poecilia formosa	41.83	1.00e-84	306.00
IUUC-Pab-097759	Pongo abelii	41.94	8.00e-87	313.00
IUUC-Pop-099553	Populus trichocarpa	41.37	5.00e-90	323.00
IUUC-Ppe-101957	Prunus persica	43.20	3.00e-91	327.00
IUUC-Pva-102918	Pteropus vampyrus	41.94	1.00e-86	313.00
IUUC-Pgr-103594	Puccinia graminis	45.23	1.00e-95	342.00
IUUC-Ptt-103879	Puccinia triticina	45.37	6.00e-88	316.00
IUUC-Pte-104419	Pyrenophora teres	62.12	3.00e-146	510.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	62.12	2.00e-146	510.00
IUUC-Rno-105838	Rattus norvegicus	41.94	6.00e-87	314.00
IUUC-Sce-106331	Saccharomyces cerevisiae	42.53	7.00e-80	289.00
IUUC-Sha-107435	Sarcophilus harrisii	41.94	9.00e-87	313.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	49.46	9.00e-102	362.00
IUUC-Spo-108163	Schizosaccharomyces pombe	49.73	8.00e-105	372.00
IUUC-Smo-109602	Selaginella moellendorffii	41.55	7.00e-91	325.00
IUUC-Sit-109729	Setaria italica	41.50	5.00e-86	310.00
IUUC-Sly-111679	Solanum lycopersicum	36.81	1.00e-89	322.00
IUUC-Sar-113157	Sorex araneus	41.94	1.00e-86	313.00
IUUC-Sbi-114853	Sorghum bicolor	39.84	7.00e-86	310.00
IUUC-Sre-115085	Sporisorium reilianum	44.38	2.00e-83	301.00
IUUC-Ssc-116286	Sus scrofa	41.55	8.00e-85	307.00
IUUC-Tgu-117219	Taeniopygia guttata	41.94	2.00e-86	313.00
IUUC-Tru-117550	Takifugu rubripes	41.94	1.00e-86	312.00
IUUC-Tsy-119294	Tarsius syrichta	41.94	5.00e-87	314.00
IUUC-Tni-120561	Tetraodon nigroviridis	41.94	7.00e-87	313.00
IUUC-Tca-121347	Theobroma cacao	38.05	9.00e-90	322.00
IUUC-Tre-122018	Trichoderma reesei	64.67	4.00e-145	506.00
IUUC-Tvi-122413	Trichoderma virens	64.13	1.00e-143	501.00
IUUC-Tae-123191	Triticum aestivum	41.50	9.00e-88	316.00
IUUC-Tme-127077	Tuber melanosporum	56.37	2.00e-120	424.00
IUUC-Tbe-127744	Tupaia belangeri	29.97	2.00e-42	166.00
IUUC-Ttr-128777	Tursiops truncatus	33.89	1.00e-62	233.00
IUUC-Uma-129568	Ustilago maydis	43.97	1.00e-82	298.00
IUUC-Vda-129834	Verticillium dahliae	63.20	9.00e-145	504.00
IUUC-Vvi-131360	Vitis vinifera	38.27	1.00e-89	322.00
IUUC-Xtr-132630	Xenopus tropicalis	42.50	3.00e-87	315.00
IUUC-Xma-133665	Xiphophorus maculatus	42.22	2.00e-86	312.00
IUUC-Yli-134556	Yarrowia lipolytica	41.96	1.00e-86	311.00
IUUC-Zma-135787	Zea mays	40.32	7.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence