iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087044

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04041916

Gene Name

ddb2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000006657.1	ENSORLT00000008355.1	ENSORLP00000008354.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-13	50.3	243	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H+++vt  +f    d+ll+++s D t+k+WDlr  
   Q: 243  HKGKVTHAEFnprCDWLLATASVDRTVKLWDLRNM 277
           9999*******9766****************9875 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MKRRKNTKPG ENGPKSQVKK RTEADSGASL SKKLKEKIEV KTSEPERPPV KPHTAQRRNG 60
HNSILHYIYR NSLGQSLHSQ MRQCLQEPFV RSLSAYHFHG ATSPFDRRIT CLEWHPTHPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTACAAAA CATCTGCTGC CATTAGTCAC GTGCGCTTCC GTGTTATGCA AACATAGACT 60
TTAGATTAAG GCGGTTCTCT TCCACAATTA CAGGTAAACT GCACATTTAC GGGGTTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	28.68	3.00e-31	129.00
IUUC-Aml-002203	Ailuropoda melanoleuca	46.70	4.00e-104	371.00
IUUC-Atr-002957	Amborella trichopoda	32.61	2.00e-39	157.00
IUUC-Apl-003832	Anas platyrhynchos	57.45	2.00e-132	466.00
IUUC-Aca-004358	Anolis carolinensis	58.54	9.00e-137	480.00
IUUC-Aly-006296	Arabidopsis lyrata	32.20	4.00e-40	159.00
IUUC-Ath-007115	Arabidopsis thaliana	31.58	2.00e-39	156.00
IUUC-Ame-010817	Astyanax mexicanus	56.77	1.00e-155	542.00
IUUC-Bta-012914	Bos taurus	48.22	2.00e-108	385.00
IUUC-Bdi-014261	Brachypodium distachyon	28.19	4.00e-31	129.00
IUUC-Bol-015317	Brassica oleracea	33.02	1.00e-41	164.00
IUUC-Bra-016848	Brassica rapa	33.02	2.00e-41	163.00
IUUC-Cja-018967	Callithrix jacchus	46.15	5.00e-103	367.00
IUUC-Cfa-021238	Canis familiaris	46.58	5.00e-99	354.00
IUUC-Cpo-022063	Cavia porcellus	49.59	1.00e-107	383.00
IUUC-Csa-023382	Chlorocebus sabaeus	46.15	6.00e-103	367.00
IUUC-Cho-024805	Choloepus hoffmanni	36.29	3.00e-39	155.00
IUUC-Dre-028732	Danio rerio	66.84	1.00e-160	559.00
IUUC-Dor-030461	Dipodomys ordii	53.18	2.00e-72	266.00
IUUC-Ete-033038	Echinops telfairi	46.83	4.00e-100	357.00
IUUC-Eca-033772	Equus caballus	46.58	9.00e-98	350.00
IUUC-Eeu-034662	Erinaceus europaeus	43.75	2.00e-25	110.00
IUUC-Fca-036095	Felis catus	46.32	3.00e-101	361.00
IUUC-Gmo-039683	Gadus morhua	64.83	2.00e-167	581.00
IUUC-Gga-040530	Gallus gallus	54.39	3.00e-133	468.00
IUUC-Gac-041517	Gasterosteus aculeatus	77.45	2.00e-175	608.00
IUUC-Gma-043378	Glycine max	29.97	8.00e-41	161.00
IUUC-Ggo-045364	Gorilla gorilla	46.43	2.00e-103	369.00
IUUC-Hsa-046354	Homo sapiens	46.43	2.00e-103	368.00
IUUC-Hvu-047151	Hordeum vulgare	29.29	1.00e-24	107.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	43.40	2.00e-104	372.00
IUUC-Lpe-051256	Leersia perrieri	29.10	5.00e-31	129.00
IUUC-Loc-052398	Lepisosteus oculatus	57.37	1.00e-132	466.00
IUUC-Laf-053562	Loxodonta africana	46.45	3.00e-98	351.00
IUUC-Mcc-055197	Macaca mulatta	46.45	5.00e-80	291.00
IUUC-Meu-056151	Macropus eugenii	48.72	2.00e-75	275.00
IUUC-Mtr-057940	Medicago truncatula	29.72	6.00e-41	162.00
IUUC-Mga-059923	Meleagris gallopavo	57.45	3.00e-138	484.00
IUUC-Mmr-061465	Microcebus murinus	47.86	8.00e-81	293.00
IUUC-Mdo-063063	Monodelphis domestica	48.66	2.00e-109	388.00
IUUC-Mmu-064294	Mus musculus	47.06	1.00e-102	366.00
IUUC-Mac-065598	Musa acuminata	30.22	6.00e-36	145.00
IUUC-Mpu-066831	Mustela putorius furo	47.12	1.00e-99	356.00
IUUC-Mlu-067222	Myotis lucifugus	47.25	2.00e-104	372.00
IUUC-Nle-069581	Nomascus leucogenys	46.70	2.00e-103	369.00
IUUC-Opr-070644	Ochotona princeps	48.32	1.00e-104	373.00
IUUC-Ont-072605	Oreochromis niloticus	68.59	1.00e-166	579.00
IUUC-Oan-072973	Ornithorhynchus anatinus	51.00	8.00e-106	376.00
IUUC-Ocu-074615	Oryctolagus cuniculus	46.03	9.00e-103	367.00
IUUC-Oba-075283	Oryza barthii	27.41	7.00e-31	128.00
IUUC-Obr-076605	Oryza brachyantha	28.46	3.00e-32	132.00
IUUC-Ogl-077512	Oryza glaberrima	27.41	9.00e-31	128.00
IUUC-Ogu-078329	Oryza glumaepatula	27.41	8.00e-31	128.00
IUUC-Oin-079980	Oryza indica	27.41	1.00e-30	128.00
IUUC-Olo-080516	Oryza longistaminata	27.61	7.00e-31	128.00
IUUC-Ome-081415	Oryza meridionalis	27.41	9.00e-31	128.00
IUUC-Oni-082985	Oryza nivara	27.41	1.00e-30	128.00
IUUC-Opu-084159	Oryza punctata	27.61	5.00e-31	129.00
IUUC-Oru-085137	Oryza rufipogon	27.41	5.00e-31	129.00
IUUC-Osa-085614	Oryza sativa	27.41	5.00e-31	129.00
IUUC-Oga-088274	Otolemur garnettii	46.58	2.00e-103	368.00
IUUC-Oar-089826	Ovis aries	47.67	1.00e-107	383.00
IUUC-Ptr-091631	Pan troglodytes	46.43	2.00e-103	368.00
IUUC-Pan-092535	Papio anubis	46.15	1.00e-103	369.00
IUUC-Psi-093815	Pelodiscus sinensis	59.35	7.00e-134	470.00
IUUC-Pma-094474	Petromyzon marinus	52.85	9.00e-105	373.00
IUUC-Ppa-095414	Physcomitrella patens	30.25	2.00e-32	133.00
IUUC-Pfo-096559	Poecilia formosa	78.39	0.00e+00	706.00
IUUC-Pab-098528	Pongo abelii	46.70	2.00e-103	369.00
IUUC-Pop-100064	Populus trichocarpa	28.35	8.00e-40	158.00
IUUC-Pca-100803	Procavia capensis	45.95	2.00e-96	345.00
IUUC-Ppe-101966	Prunus persica	29.27	1.00e-37	150.00
IUUC-Pva-103213	Pteropus vampyrus	46.43	1.00e-98	353.00
IUUC-Rno-105087	Rattus norvegicus	46.47	6.00e-102	363.00
IUUC-Sha-107466	Sarcophilus harrisii	50.14	9.00e-109	386.00
IUUC-Smo-108958	Selaginella moellendorffii	28.42	7.00e-33	135.00
IUUC-Sit-109968	Setaria italica	26.81	3.00e-30	126.00
IUUC-Sly-111495	Solanum lycopersicum	30.43	2.00e-37	150.00
IUUC-Sar-113272	Sorex araneus	48.37	3.00e-99	354.00
IUUC-Sbi-114706	Sorghum bicolor	26.02	1.00e-27	117.00
IUUC-Ssc-115437	Sus scrofa	46.58	8.00e-102	363.00
IUUC-Tgu-116602	Taeniopygia guttata	56.91	2.00e-127	448.00
IUUC-Tru-118698	Takifugu rubripes	73.41	8.00e-168	583.00
IUUC-Tsy-119027	Tarsius syrichta	47.35	2.00e-91	328.00
IUUC-Tni-119787	Tetraodon nigroviridis	66.89	2.00e-175	608.00
IUUC-Tca-121447	Theobroma cacao	30.43	7.00e-39	155.00
IUUC-Tae-123253	Triticum aestivum	28.21	2.00e-32	134.00
IUUC-Tur-126724	Triticum urartu	27.71	4.00e-32	132.00
IUUC-Tbe-127680	Tupaia belangeri	44.24	6.00e-70	257.00
IUUC-Ttr-128201	Tursiops truncatus	39.01	1.00e-77	283.00
IUUC-Vpa-130451	Vicugna pacos	55.56	1.00e-22	100.00
IUUC-Vvi-131001	Vitis vinifera	29.49	6.00e-40	158.00
IUUC-Xtr-132266	Xenopus tropicalis	53.93	9.00e-120	423.00
IUUC-Xma-133034	Xiphophorus maculatus	70.80	3.00e-180	624.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence