iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093200

Ensembl Protein ID

ENSPSIP00000014587.1

UniProt Accession

K7G2S6; K7G2S6_PELSI

Genbank Protein ID

ENSPSIP00000014587

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01128764

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013024.1	ENSPSIT00000014655.1	ENSPSIP00000014587.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-54	178.2	533	572
UBD/Beta-Prp	4.50e-93	311.7	361	647

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+ +++c++f   d  l+++s Dgt+k+W l+++ +lk+
   Q: 533  GHKRGIWCVQFspVDQVLATSSADGTVKLWGLHDFSCLKT 572
           8**********975599********************986 PP

UBD/Beta-Prp

   S: 23   sllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfsp.sgd 107
           s+++++  +  +kv+++ t  + + l+gh+++v a++  ++g +++++++Dr ++vw ++     +cv    gh + v +ls s+ + +
   Q: 361  SHIVVATNSPQLKVFELATSHC-QILYGHTETVLALDVFRKGLMFASCAKDRSLRVWRMDkagEVTCVAEGLGHAHGVGALSCSRmKES 448
           66777888899********777.**********************************777645677888888*************666* PP
   S: 108  klvsGshdrtirvwdletgqclee...............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
           ++v+ s+d ti+vw+l++    ++               t++ghd+ +n+v+v+p+++l+++Gs Drt +lW+ +  +l+  ++g h++
   Q: 449  FVVTSSQDCTIKVWNLPESLTAKAkagliaspetlhahvTERGHDKDINSVAVSPNDKLIATGSQDRTAKLWSCPDCSLMGVFSG-HKR 536
           *****************99998889***********************************************************9.*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisv 270
            + +++f++  + l++ s dgtvklw l+  +c++t++gh++ v+ ++f ++++ l++ +  g +++  + +++++ktl +h+++v+  
   Q: 537  GIWCVQFSPVDQVLATSSADGTVKLWGLHDFSCLKTFEGHDASVLKMAFVSRGTQLLTRGVQGGLQMSIILTNECVKTLDGHEDKVWGL 625
           ***************************************************************************************** PP
   S: 271  avlsfgdnvlvlgsedskvniwk 293
            + + +d  +v++s+ds++ +wk
   Q: 626  HC-NKQDDLVVTASSDSCIILWK 647
           **.999***************98 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

VYFNSSSICV PFSPFSYAVS RKIEPFYKGG KIQISQDGKH MFCPCGTKLN VMDIATGALV 60
HSIEQDDLED ITSFVLSPDD EILVTGSRAL LLKQWEWREN KCRRTWKATH TAPVATMVFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTATTTTA ACTCTTCCTC AATTTGTGTT CCTTTTTCCC CTTTTAGTTA TGCTGTGTCT 60
AGGAAAATTG AACCATTCTA CAAAGGAGGA AAAATTCAGG TAATACAAAA CCCCAGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	35.80	4.00e-142	498.00
IUUC-Aml-002376	Ailuropoda melanoleuca	64.47	0.00e+00	1065.00
IUUC-Atr-002486	Amborella trichopoda	37.24	2.00e-158	553.00
IUUC-Apl-003519	Anas platyrhynchos	68.09	0.00e+00	987.00
IUUC-Aca-004363	Anolis carolinensis	65.61	0.00e+00	627.00
IUUC-Aly-006152	Arabidopsis lyrata	36.35	1.00e-149	523.00
IUUC-Ath-006966	Arabidopsis thaliana	36.45	4.00e-150	525.00
IUUC-Ago-007746	Ashbya gossypii	28.77	4.00e-100	358.00
IUUC-Acl-008009	Aspergillus clavatus	28.11	2.00e-102	366.00
IUUC-Afl-008681	Aspergillus flavus	27.78	1.00e-91	331.00
IUUC-Afu-008798	Aspergillus fumigatus	27.51	1.00e-90	327.00
IUUC-Ani-009278	Aspergillus nidulans	27.90	9.00e-99	354.00
IUUC-Ang-009640	Aspergillus niger	29.24	4.00e-97	349.00
IUUC-Aor-010160	Aspergillus oryzae	27.86	1.00e-91	330.00
IUUC-Ate-010320	Aspergillus terreus	28.02	1.00e-102	367.00
IUUC-Ame-010930	Astyanax mexicanus	74.87	2.00e-90	324.00
IUUC-Bgr-012054	Blumeria graminis	29.56	2.00e-97	350.00
IUUC-Bta-012611	Bos taurus	64.85	0.00e+00	1040.00
IUUC-Bci-013797	Botrytis cinerea	28.21	4.00e-104	372.00
IUUC-Bdi-014384	Brachypodium distachyon	37.50	6.00e-158	551.00
IUUC-Bol-015097	Brassica oleracea	37.39	7.00e-152	531.00
IUUC-Bra-017328	Brassica rapa	37.01	3.00e-151	528.00
IUUC-Cel-018664	Caenorhabditis elegans	31.98	3.00e-117	416.00
IUUC-Cja-019092	Callithrix jacchus	64.57	0.00e+00	1065.00
IUUC-Cfa-021040	Canis familiaris	63.90	0.00e+00	1039.00
IUUC-Cpo-022529	Cavia porcellus	65.07	0.00e+00	1050.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	55.56	2.00e-42	164.00
IUUC-Csa-024205	Chlorocebus sabaeus	64.51	0.00e+00	1060.00
IUUC-Cin-025560	Ciona intestinalis	46.55	0.00e+00	734.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.87	2.00e-105	377.00
IUUC-Cne-027082	Cryptococcus neoformans	29.47	8.00e-108	384.00
IUUC-Cme-027159	Cyanidioschyzon merolae	22.59	1.00e-22	102.00
IUUC-Dre-028138	Danio rerio	55.46	0.00e+00	920.00
IUUC-Dno-029914	Dasypus novemcinctus	56.98	0.00e+00	763.00
IUUC-Dor-030685	Dipodomys ordii	62.89	5.00e-173	600.00
IUUC-Dse-031429	Dothistroma septosporum	26.89	3.00e-91	330.00
IUUC-Dme-031995	Drosophila melanogaster	31.64	2.00e-114	406.00
IUUC-Ete-033086	Echinops telfairi	67.22	3.00e-169	588.00
IUUC-Eca-034354	Equus caballus	65.10	0.00e+00	1044.00
IUUC-Eeu-034832	Erinaceus europaeus	68.26	0.00e+00	627.00
IUUC-Fca-036136	Felis catus	56.38	0.00e+00	874.00
IUUC-Fal-036859	Ficedula albicollis	78.95	0.00e+00	1271.00
IUUC-Fox-037863	Fusarium oxysporum	28.82	6.00e-97	348.00
IUUC-Fso-038389	Fusarium solani	28.68	4.00e-104	372.00
IUUC-Gmo-038711	Gadus morhua	61.53	0.00e+00	969.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.44	3.00e-94	339.00
IUUC-Gga-040263	Gallus gallus	82.65	0.00e+00	1349.00
IUUC-Gac-041291	Gasterosteus aculeatus	65.10	0.00e+00	1079.00
IUUC-Gma-044026	Glycine max	38.24	7.00e-163	567.00
IUUC-Ggo-044693	Gorilla gorilla	64.82	0.00e+00	1041.00
IUUC-Hsa-046048	Homo sapiens	64.70	0.00e+00	1040.00
IUUC-Hvu-047608	Hordeum vulgare	37.58	4.00e-158	551.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	65.86	0.00e+00	1087.00
IUUC-Kpa-049209	Komagataella pastoris	30.78	2.00e-105	376.00
IUUC-Lch-050085	Latimeria chalumnae	71.25	0.00e+00	1095.00
IUUC-Lpe-050945	Leersia perrieri	37.10	1.00e-155	543.00
IUUC-Loc-052679	Lepisosteus oculatus	68.52	0.00e+00	1139.00
IUUC-Laf-053685	Loxodonta africana	64.21	0.00e+00	999.00
IUUC-Mcc-055861	Macaca mulatta	64.89	0.00e+00	1039.00
IUUC-Meu-056820	Macropus eugenii	59.70	0.00e+00	832.00
IUUC-Mor-057234	Magnaporthe oryzae	27.04	2.00e-90	327.00
IUUC-Mpo-057456	Magnaporthe poae	28.49	1.00e-76	280.00
IUUC-Mtr-058122	Medicago truncatula	38.09	9.00e-165	573.00
IUUC-Mla-058980	Melampsora laricipopulina	26.95	6.00e-82	298.00
IUUC-Mga-060080	Meleagris gallopavo	82.33	0.00e+00	1340.00
IUUC-Mvi-060338	Microbotryum violaceum	33.56	3.00e-132	465.00
IUUC-Mmr-060762	Microcebus murinus	64.94	0.00e+00	1041.00
IUUC-Mdo-061975	Monodelphis domestica	66.75	0.00e+00	1046.00
IUUC-Mmu-064038	Mus musculus	65.19	0.00e+00	1048.00
IUUC-Mac-065189	Musa acuminata	35.39	3.00e-155	542.00
IUUC-Mpu-066526	Mustela putorius furo	64.97	0.00e+00	1042.00
IUUC-Mlu-067716	Myotis lucifugus	65.20	0.00e+00	1092.00
IUUC-Nfi-068474	Neosartorya fischeri	28.21	7.00e-95	341.00
IUUC-Ncr-068826	Neurospora crassa	25.96	6.00e-89	322.00
IUUC-Nle-069832	Nomascus leucogenys	65.20	0.00e+00	1074.00
IUUC-Opr-071183	Ochotona princeps	61.41	0.00e+00	967.00
IUUC-Ont-072371	Oreochromis niloticus	66.54	0.00e+00	1079.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.67	0.00e+00	994.00
IUUC-Oba-075963	Oryza barthii	38.37	4.00e-156	545.00
IUUC-Obr-076173	Oryza brachyantha	37.09	3.00e-157	548.00
IUUC-Ogl-077692	Oryza glaberrima	38.42	2.00e-155	543.00
IUUC-Ogu-078965	Oryza glumaepatula	38.50	2.00e-156	546.00
IUUC-Oin-079708	Oryza indica	38.11	2.00e-155	543.00
IUUC-Olo-080679	Oryza longistaminata	38.24	1.00e-154	540.00
IUUC-Oni-082960	Oryza nivara	37.98	5.00e-155	541.00
IUUC-Opu-083282	Oryza punctata	38.11	3.00e-152	532.00
IUUC-Oru-085224	Oryza rufipogon	38.37	3.00e-156	545.00
IUUC-Osa-085320	Oryza sativa	38.37	3.00e-156	545.00
IUUC-Ola-086370	Oryzias latipes	53.38	8.00e-154	536.00
IUUC-Olu-087814	Ostreococcus lucimarinus	31.42	4.00e-98	352.00
IUUC-Oga-088458	Otolemur garnettii	63.50	0.00e+00	1068.00
IUUC-Oar-090032	Ovis aries	58.74	0.00e+00	738.00
IUUC-Ptr-090749	Pan troglodytes	64.70	0.00e+00	1036.00
IUUC-Pan-091691	Papio anubis	62.48	0.00e+00	989.00
IUUC-Pma-094165	Petromyzon marinus	54.89	0.00e+00	702.00
IUUC-Pno-095048	Phaeosphaeria nodorum	29.96	1.00e-83	304.00
IUUC-Ppa-095336	Physcomitrella patens	41.00	6.00e-168	584.00
IUUC-Pfo-096132	Poecilia formosa	65.35	0.00e+00	1057.00
IUUC-Pab-097855	Pongo abelii	64.32	0.00e+00	1058.00
IUUC-Pop-099434	Populus trichocarpa	34.76	2.00e-146	513.00
IUUC-Pca-100232	Procavia capensis	58.72	3.00e-118	419.00
IUUC-Ppe-101665	Prunus persica	35.96	4.00e-155	541.00
IUUC-Pva-102178	Pteropus vampyrus	66.37	0.00e+00	1068.00
IUUC-Pgr-103288	Puccinia graminis	27.90	7.00e-75	275.00
IUUC-Ptt-103808	Puccinia triticina	30.72	6.00e-77	281.00
IUUC-Pte-104205	Pyrenophora teres	29.79	1.00e-100	360.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	28.43	4.00e-94	339.00
IUUC-Rno-105617	Rattus norvegicus	65.23	0.00e+00	1053.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.02	3.00e-105	376.00
IUUC-Sha-107378	Sarcophilus harrisii	65.45	0.00e+00	1024.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	33.71	2.00e-117	416.00
IUUC-Spo-108361	Schizosaccharomyces pombe	31.08	1.00e-109	390.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	28.90	1.00e-107	384.00
IUUC-Smo-109257	Selaginella moellendorffii	35.65	2.00e-150	525.00
IUUC-Sit-110258	Setaria italica	35.89	2.00e-156	546.00
IUUC-Sly-111521	Solanum lycopersicum	35.57	2.00e-151	529.00
IUUC-Stu-112718	Solanum tuberosum	49.29	2.00e-34	137.00
IUUC-Sar-113586	Sorex araneus	51.06	1.00e-43	171.00
IUUC-Sbi-114768	Sorghum bicolor	36.70	6.00e-161	561.00
IUUC-Sre-115159	Sporisorium reilianum	33.59	8.00e-94	338.00
IUUC-Ssc-116342	Sus scrofa	46.61	0.00e+00	644.00
IUUC-Tgu-117320	Taeniopygia guttata	77.02	0.00e+00	1231.00
IUUC-Tru-118024	Takifugu rubripes	64.66	0.00e+00	1052.00
IUUC-Tni-119971	Tetraodon nigroviridis	64.63	0.00e+00	1031.00
IUUC-Tca-121248	Theobroma cacao	37.73	3.00e-160	558.00
IUUC-Tre-122079	Trichoderma reesei	30.12	3.00e-99	355.00
IUUC-Tvi-122554	Trichoderma virens	29.71	1.00e-96	347.00
IUUC-Tae-125845	Triticum aestivum	38.23	3.00e-160	558.00
IUUC-Tur-126436	Triticum urartu	37.04	4.00e-129	455.00
IUUC-Tme-126942	Tuber melanosporum	30.92	1.00e-102	367.00
IUUC-Tbe-128000	Tupaia belangeri	64.86	2.00e-60	226.00
IUUC-Ttr-128964	Tursiops truncatus	63.37	0.00e+00	1037.00
IUUC-Uma-129473	Ustilago maydis	31.52	4.00e-103	369.00
IUUC-Vda-129749	Verticillium dahliae	30.47	9.00e-95	341.00
IUUC-Vvi-131511	Vitis vinifera	37.50	4.00e-155	541.00
IUUC-Xtr-132816	Xenopus tropicalis	63.88	0.00e+00	1028.00
IUUC-Xma-133672	Xiphophorus maculatus	65.97	0.00e+00	1071.00
IUUC-Yli-134602	Yarrowia lipolytica	34.79	8.00e-140	490.00
IUUC-Zma-135559	Zea mays	35.36	3.00e-153	535.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence