iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076037

Ensembl Protein ID

OB07G30440.1

UniProt Accession

J3MNR2; J3MNR2_ORYBR

Protein Name

E3 ubiquitin-protein ligase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB07G30440	OB07G30440.1	OB07G30440.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.29	2.00e-39	159.00	IUUC-Dme-031700
E3 activity/RING/RING	35.43	6.00e-39	159.00	IUUC-Hsa-046357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza brachyantha

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MWVSRVRLVC CLIRGFLLGL FLENLGAFLL WNGRESAADS TFIGLSMASA TYLDDANSDV 60
IDPPKNEEIL DVTELVGDHT QHSPKPNVMV SGNVRELLEC PVCLNAMYPP IHQCSNGHTL 120

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Nucleotide Sequence
(Fasta)

ATGTGGGTGT CTCGCGTGCG CCTTGTTTGC TGTTTGATTA GGGGTTTTTT GCTTGGTTTG 60
TTCTTGGAAA ATTTGGGGGC TTTCTTGCTT TGGAACGGAA GGGAGAGGTG TGCGTGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000061	Aegilops tauschii	70.00	4.00e-121	426.00
IUUC-Aml-001186	Ailuropoda melanoleuca	35.43	2.00e-40	158.00
IUUC-Atr-003118	Amborella trichopoda	81.94	8.00e-150	521.00
IUUC-Apl-003813	Anas platyrhynchos	35.43	1.00e-40	159.00
IUUC-Aca-005014	Anolis carolinensis	35.43	2.00e-40	158.00
IUUC-Aly-006522	Arabidopsis lyrata	82.81	1.00e-131	461.00
IUUC-Ath-007092	Arabidopsis thaliana	81.08	4.00e-132	463.00
IUUC-Ame-011196	Astyanax mexicanus	35.95	9.00e-41	159.00
IUUC-Bta-012887	Bos taurus	35.43	2.00e-40	158.00
IUUC-Bdi-014729	Brachypodium distachyon	80.23	3.00e-131	460.00
IUUC-Bol-015983	Brassica oleracea	77.98	7.00e-132	462.00
IUUC-Bra-016910	Brassica rapa	79.06	5.00e-133	466.00
IUUC-Cel-018320	Caenorhabditis elegans	33.85	9.00e-37	146.00
IUUC-Cja-019796	Callithrix jacchus	35.43	2.00e-40	158.00
IUUC-Cfa-020642	Canis familiaris	35.43	1.00e-40	159.00
IUUC-Cpo-022348	Cavia porcellus	35.43	1.00e-40	159.00
IUUC-Csa-023974	Chlorocebus sabaeus	35.43	2.00e-40	158.00
IUUC-Cho-024933	Choloepus hoffmanni	35.32	6.00e-37	146.00
IUUC-Cin-025674	Ciona intestinalis	35.55	1.00e-42	165.00
IUUC-Csv-026233	Ciona savignyi	36.08	8.00e-43	166.00
IUUC-Dre-028041	Danio rerio	35.95	9.00e-41	159.00
IUUC-Dno-029764	Dasypus novemcinctus	32.99	1.00e-40	159.00
IUUC-Dor-030489	Dipodomys ordii	30.27	3.00e-18	84.00
IUUC-Dme-031700	Drosophila melanogaster	35.32	1.00e-36	145.00
IUUC-Ete-032423	Echinops telfairi	36.25	5.00e-40	157.00
IUUC-Eca-033536	Equus caballus	35.43	1.00e-40	159.00
IUUC-Eeu-035314	Erinaceus europaeus	33.56	1.00e-40	159.00
IUUC-Fca-035362	Felis catus	35.71	1.00e-40	159.00
IUUC-Fal-037487	Ficedula albicollis	35.71	1.00e-40	159.00
IUUC-Gmo-039091	Gadus morhua	34.51	7.00e-36	143.00
IUUC-Gga-040269	Gallus gallus	35.43	1.00e-40	159.00
IUUC-Gac-042282	Gasterosteus aculeatus	35.43	7.00e-41	159.00
IUUC-Gma-042926	Glycine max	85.86	7.00e-159	551.00
IUUC-Ggo-045444	Gorilla gorilla	35.43	2.00e-40	158.00
IUUC-Hsa-046357	Homo sapiens	35.43	2.00e-40	158.00
IUUC-Hvu-047574	Hordeum vulgare	67.20	1.00e-121	427.00
IUUC-Itr-048046	Ictidomys tridecemlineatus	35.43	1.00e-40	159.00
IUUC-Lch-049504	Latimeria chalumnae	35.43	1.00e-40	159.00
IUUC-Lpe-050879	Leersia perrieri	77.87	9.00e-124	435.00
IUUC-Loc-052191	Lepisosteus oculatus	35.43	1.00e-40	159.00
IUUC-Laf-053668	Loxodonta africana	35.43	1.00e-40	159.00
IUUC-Mcc-054640	Macaca mulatta	35.43	2.00e-40	158.00
IUUC-Meu-055922	Macropus eugenii	34.92	6.00e-36	143.00
IUUC-Mtr-058422	Medicago truncatula	83.44	7.00e-155	538.00
IUUC-Mga-059503	Meleagris gallopavo	35.43	1.00e-40	159.00
IUUC-Mmr-060794	Microcebus murinus	35.43	1.00e-40	159.00
IUUC-Mdo-061971	Monodelphis domestica	34.92	2.00e-36	145.00
IUUC-Mmu-063876	Mus musculus	35.43	1.00e-40	159.00
IUUC-Mac-065670	Musa acuminata	80.00	5.00e-134	469.00
IUUC-Mpu-066488	Mustela putorius furo	35.43	2.00e-40	158.00
IUUC-Mlu-067207	Myotis lucifugus	35.43	1.00e-40	159.00
IUUC-Nle-069706	Nomascus leucogenys	35.43	2.00e-40	158.00
IUUC-Opr-070341	Ochotona princeps	24.84	9.00e-13	66.20
IUUC-Ont-071849	Oreochromis niloticus	35.43	6.00e-41	160.00
IUUC-Oan-073701	Ornithorhynchus anatinus	22.64	6.00e-12	63.50
IUUC-Ocu-074876	Oryctolagus cuniculus	35.43	2.00e-40	158.00
IUUC-Oba-075789	Oryza barthii	97.68	0.00e+00	627.00
IUUC-Ogl-077148	Oryza glaberrima	97.68	0.00e+00	627.00
IUUC-Ogu-078042	Oryza glumaepatula	91.84	0.00e+00	638.00
IUUC-Oin-079325	Oryza indica	98.01	0.00e+00	629.00
IUUC-Olo-080244	Oryza longistaminata	97.10	0.00e+00	640.00
IUUC-Ome-081318	Oryza meridionalis	78.26	1.00e-123	434.00
IUUC-Oni-082163	Oryza nivara	97.68	0.00e+00	627.00
IUUC-Opu-084065	Oryza punctata	77.87	3.00e-123	433.00
IUUC-Oru-084833	Oryza rufipogon	98.01	0.00e+00	629.00
IUUC-Osa-085316	Oryza sativa	98.01	0.00e+00	629.00
IUUC-Ola-086814	Oryzias latipes	35.43	7.00e-41	159.00
IUUC-Oga-088114	Otolemur garnettii	35.32	8.00e-42	162.00
IUUC-Oar-089323	Ovis aries	35.71	2.00e-40	158.00
IUUC-Ptr-090692	Pan troglodytes	35.43	2.00e-40	158.00
IUUC-Pan-092012	Papio anubis	35.43	2.00e-40	158.00
IUUC-Psi-093687	Pelodiscus sinensis	35.71	2.00e-40	158.00
IUUC-Pma-094387	Petromyzon marinus	34.40	5.00e-41	160.00
IUUC-Ppa-095212	Physcomitrella patens	83.33	5.00e-137	479.00
IUUC-Pfo-097134	Poecilia formosa	35.43	7.00e-41	159.00
IUUC-Pab-097555	Pongo abelii	35.43	2.00e-40	158.00
IUUC-Pop-100033	Populus trichocarpa	81.44	3.00e-132	463.00
IUUC-Pca-100328	Procavia capensis	34.13	7.00e-34	136.00
IUUC-Ppe-101960	Prunus persica	81.20	4.00e-133	466.00
IUUC-Pva-103132	Pteropus vampyrus	23.90	2.00e-11	61.60
IUUC-Rno-104866	Rattus norvegicus	35.43	9.00e-41	159.00
IUUC-Sha-106547	Sarcophilus harrisii	35.43	1.00e-40	159.00
IUUC-Smo-109412	Selaginella moellendorffii	83.27	5.00e-134	469.00
IUUC-Sit-110245	Setaria italica	91.25	2.00e-179	620.00
IUUC-Sly-111259	Solanum lycopersicum	80.46	4.00e-131	459.00
IUUC-Stu-112474	Solanum tuberosum	83.83	7.00e-156	541.00
IUUC-Sbi-114035	Sorghum bicolor	94.70	1.00e-176	610.00
IUUC-Ssc-116441	Sus scrofa	35.32	7.00e-37	146.00
IUUC-Tgu-116579	Taeniopygia guttata	35.43	1.00e-40	159.00
IUUC-Tru-118250	Takifugu rubripes	34.07	2.00e-39	154.00
IUUC-Tsy-119548	Tarsius syrichta	27.35	3.00e-08	50.80
IUUC-Tni-120488	Tetraodon nigroviridis	35.92	2.00e-38	151.00
IUUC-Tca-121228	Theobroma cacao	87.87	5.00e-162	562.00
IUUC-Tae-123647	Triticum aestivum	70.00	4.00e-121	426.00
IUUC-Tur-126049	Triticum urartu	85.29	3.00e-171	592.00
IUUC-Ttr-129166	Tursiops truncatus	35.83	2.00e-38	152.00
IUUC-Vpa-130799	Vicugna pacos	31.58	2.00e-18	84.30
IUUC-Vvi-131233	Vitis vinifera	77.36	7.00e-126	442.00
IUUC-Xtr-132553	Xenopus tropicalis	35.43	1.00e-40	159.00
IUUC-Xma-133670	Xiphophorus maculatus	35.43	7.00e-41	159.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence