iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132033

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01000557

Gene Name

rfwd2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000009192.3	ENSXETT00000020180.3	ENSXETP00000020180.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-06	28.1	132	170
E3 adaptor/Cullin RING/DCX/DWD	6.50e-24	83.2	589	627

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++++  + + CgH f+ +C+++          + rCP C+
   Q: 132  CPICFEMIEE-AYMTKCGHSFCYKCIHQS------LEDNNRCPKCN 170
           ********99.888***********9555......999999****6 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllks 38
           gH   v+  +f +++ +vs+s D ++k+W++++ ++l+s
   Q: 589  GHRKAVSYAKFvNGDEIVSASTDSQLKLWNVSRPHCLRS 627
           788899999998889******************999986 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

YPVTHRSLPV SDRVVCLLCS GACAGPRPGV HFLALRRRTM SSSRQSQQLP GPGGGTGPSS 60
SSSSAPSSSS SAGTLRPGLV SGSALSRLGT GGSGSALVGR PGSSAGRKRP LPTPLCNGLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACCCCGTCA CTCACCGGAG CCTTCCGGTG TCGGACCGGG TAGGACAGTG CTGAAGATAC 60
TTTTTTGTTT GTCTTCTGTG TAGCGGAGCA TGTGCTGGGC CTAGGCCGGG AGTTCACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	40.06	1.00e-125	443.00
IUUC-Aml-001265	Ailuropoda melanoleuca	95.48	0.00e+00	1201.00
IUUC-Atr-002460	Amborella trichopoda	39.26	2.00e-124	439.00
IUUC-Apl-003796	Anas platyrhynchos	95.01	0.00e+00	1116.00
IUUC-Aca-005078	Anolis carolinensis	96.27	0.00e+00	1192.00
IUUC-Aly-006014	Arabidopsis lyrata	39.94	7.00e-130	457.00
IUUC-Ath-007636	Arabidopsis thaliana	38.51	3.00e-130	458.00
IUUC-Ame-011176	Astyanax mexicanus	95.87	2.00e-69	256.00
IUUC-Bta-012595	Bos taurus	95.65	0.00e+00	1203.00
IUUC-Bdi-014152	Brachypodium distachyon	39.78	4.00e-129	455.00
IUUC-Bol-016380	Brassica oleracea	40.33	5.00e-131	461.00
IUUC-Bra-017690	Brassica rapa	39.42	5.00e-126	444.00
IUUC-Cja-018926	Callithrix jacchus	95.49	0.00e+00	1199.00
IUUC-Cfa-021088	Canis familiaris	95.33	0.00e+00	1200.00
IUUC-Cpo-022442	Cavia porcellus	94.57	0.00e+00	1162.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	34.18	4.00e-34	137.00
IUUC-Csa-024119	Chlorocebus sabaeus	95.33	0.00e+00	1199.00
IUUC-Cho-024883	Choloepus hoffmanni	65.57	1.00e-104	373.00
IUUC-Cin-025375	Ciona intestinalis	54.82	0.00e+00	687.00
IUUC-Cme-027350	Cyanidioschyzon merolae	41.35	4.00e-79	289.00
IUUC-Dre-028453	Danio rerio	85.27	0.00e+00	1078.00
IUUC-Dno-029887	Dasypus novemcinctus	95.17	0.00e+00	1198.00
IUUC-Dor-031110	Dipodomys ordii	87.42	0.00e+00	853.00
IUUC-Ete-033016	Echinops telfairi	81.48	0.00e+00	999.00
IUUC-Eca-034403	Equus caballus	95.15	0.00e+00	1113.00
IUUC-Eeu-034690	Erinaceus europaeus	78.49	0.00e+00	919.00
IUUC-Fca-036475	Felis catus	94.83	0.00e+00	1118.00
IUUC-Fal-037189	Ficedula albicollis	95.97	0.00e+00	1156.00
IUUC-Gmo-039245	Gadus morhua	85.78	0.00e+00	1050.00
IUUC-Gga-040806	Gallus gallus	95.48	0.00e+00	1198.00
IUUC-Gac-042177	Gasterosteus aculeatus	85.60	0.00e+00	1090.00
IUUC-Gma-044187	Glycine max	40.67	1.00e-126	447.00
IUUC-Ggo-044430	Gorilla gorilla	93.88	0.00e+00	890.00
IUUC-Hsa-045853	Homo sapiens	95.49	0.00e+00	1201.00
IUUC-Hvu-047750	Hordeum vulgare	38.97	4.00e-95	343.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	97.92	4.00e-142	496.00
IUUC-Lch-050420	Latimeria chalumnae	91.35	0.00e+00	1145.00
IUUC-Lpe-051219	Leersia perrieri	39.69	4.00e-124	438.00
IUUC-Loc-052728	Lepisosteus oculatus	90.42	0.00e+00	1097.00
IUUC-Laf-053775	Loxodonta africana	95.14	0.00e+00	1203.00
IUUC-Meu-056595	Macropus eugenii	77.01	8.00e-177	613.00
IUUC-Mtr-058555	Medicago truncatula	41.12	2.00e-134	472.00
IUUC-Mga-059646	Meleagris gallopavo	94.68	0.00e+00	1115.00
IUUC-Mmr-060990	Microcebus murinus	95.79	0.00e+00	1199.00
IUUC-Mdo-062287	Monodelphis domestica	95.97	0.00e+00	1208.00
IUUC-Mmu-064097	Mus musculus	95.33	0.00e+00	1202.00
IUUC-Mac-065240	Musa acuminata	41.01	8.00e-135	474.00
IUUC-Mpu-066612	Mustela putorius furo	94.85	0.00e+00	1122.00
IUUC-Mlu-067967	Myotis lucifugus	93.13	0.00e+00	1120.00
IUUC-Nle-069543	Nomascus leucogenys	95.65	0.00e+00	1205.00
IUUC-Opr-070366	Ochotona princeps	80.05	0.00e+00	688.00
IUUC-Ont-071522	Oreochromis niloticus	84.18	0.00e+00	1093.00
IUUC-Oan-073409	Ornithorhynchus anatinus	95.36	0.00e+00	1121.00
IUUC-Ocu-073756	Oryctolagus cuniculus	95.01	0.00e+00	1167.00
IUUC-Oba-075149	Oryza barthii	39.41	1.00e-127	451.00
IUUC-Obr-076563	Oryza brachyantha	40.03	2.00e-127	449.00
IUUC-Ogl-077701	Oryza glaberrima	39.45	4.00e-128	451.00
IUUC-Ogu-078383	Oryza glumaepatula	39.45	4.00e-128	451.00
IUUC-Oin-079965	Oryza indica	37.14	2.00e-114	406.00
IUUC-Olo-080639	Oryza longistaminata	38.82	3.00e-125	442.00
IUUC-Ome-081821	Oryza meridionalis	38.93	1.00e-116	414.00
IUUC-Oni-082622	Oryza nivara	39.45	4.00e-128	451.00
IUUC-Opu-083295	Oryza punctata	39.14	6.00e-128	451.00
IUUC-Oru-084661	Oryza rufipogon	39.45	4.00e-128	451.00
IUUC-Osa-085766	Oryza sativa	39.45	4.00e-128	451.00
IUUC-Ola-086727	Oryzias latipes	83.64	0.00e+00	1096.00
IUUC-Olu-087702	Ostreococcus lucimarinus	43.49	5.00e-70	257.00
IUUC-Oga-088215	Otolemur garnettii	93.55	0.00e+00	1176.00
IUUC-Oar-089880	Ovis aries	95.52	0.00e+00	1169.00
IUUC-Ptr-090597	Pan troglodytes	95.49	0.00e+00	1201.00
IUUC-Pan-091987	Papio anubis	95.81	0.00e+00	1206.00
IUUC-Psi-094033	Pelodiscus sinensis	96.59	0.00e+00	1148.00
IUUC-Pma-094587	Petromyzon marinus	69.73	0.00e+00	798.00
IUUC-Ppa-095256	Physcomitrella patens	39.76	1.00e-133	470.00
IUUC-Pfo-097388	Poecilia formosa	83.51	0.00e+00	1083.00
IUUC-Pab-098029	Pongo abelii	95.49	0.00e+00	1202.00
IUUC-Pop-099319	Populus trichocarpa	39.04	2.00e-130	459.00
IUUC-Pca-100846	Procavia capensis	87.76	0.00e+00	1105.00
IUUC-Ppe-101250	Prunus persica	38.53	5.00e-120	424.00
IUUC-Pva-102407	Pteropus vampyrus	95.49	0.00e+00	1192.00
IUUC-Rno-105312	Rattus norvegicus	95.33	0.00e+00	1200.00
IUUC-Sha-106514	Sarcophilus harrisii	97.85	0.00e+00	765.00
IUUC-Smo-109418	Selaginella moellendorffii	40.72	8.00e-130	457.00
IUUC-Sit-110248	Setaria italica	39.47	1.00e-128	453.00
IUUC-Sly-110964	Solanum lycopersicum	40.59	7.00e-130	457.00
IUUC-Stu-112882	Solanum tuberosum	40.90	5.00e-131	461.00
IUUC-Sar-113230	Sorex araneus	70.51	0.00e+00	786.00
IUUC-Sbi-113962	Sorghum bicolor	37.69	2.00e-123	436.00
IUUC-Ssc-115987	Sus scrofa	93.33	3.00e-165	574.00
IUUC-Tgu-116471	Taeniopygia guttata	95.79	0.00e+00	1196.00
IUUC-Tru-118231	Takifugu rubripes	84.30	0.00e+00	1048.00
IUUC-Tsy-119415	Tarsius syrichta	94.96	0.00e+00	1128.00
IUUC-Tni-120893	Tetraodon nigroviridis	85.71	0.00e+00	1048.00
IUUC-Tca-121703	Theobroma cacao	40.90	3.00e-129	455.00
IUUC-Tae-125317	Triticum aestivum	41.49	4.00e-134	471.00
IUUC-Tur-126557	Triticum urartu	41.04	7.00e-130	457.00
IUUC-Tbe-127253	Tupaia belangeri	69.08	0.00e+00	823.00
IUUC-Ttr-129100	Tursiops truncatus	93.61	0.00e+00	1097.00
IUUC-Vpa-130613	Vicugna pacos	89.24	0.00e+00	1055.00
IUUC-Vvi-130880	Vitis vinifera	41.23	4.00e-123	434.00
IUUC-Xma-133421	Xiphophorus maculatus	83.36	0.00e+00	1080.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence