iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 3    vClvCgeggedek..slveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C +C+++  d++  ++v C+ C++++H  C+ ++  e++pn e w+C+ C++
   Q: 402  SC-LCRNCLTDKDddKIVLCDGCDDAYHIYCMRPP-CESVPNGE-WFCTACKA 451
           58.9999877665569*******************.*******8.******86 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MFMEEATSNG KGTEHNQPNG LVESEALNNW SAGCGAMANS ANASSRDSKK IQTYKRRKLG 60
RSYSANKCSE NDRFSMEGVS HSESRESVSY ERFSIRTHLT GELPKPPSPN KPSSESTNHE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAATGATT CAAAGATAAG AAAGGCCGGG ATTTACAGAA CCACCGGCGA GTCTTAATCT 60
CCGAGAGCCG GTAAATCAAT CCTCTTCCTC AAATTTCTAG GGTTTGCTCT TCGTCGGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ath:AT1G77250

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000842	Aegilops tauschii	31.40	6.00e-53	201.00
IUUC-Atr-003036	Amborella trichopoda	31.25	5.00e-42	165.00
IUUC-Aly-005677	Arabidopsis lyrata	85.74	0.00e+00	862.00
IUUC-Bdi-014741	Brachypodium distachyon	30.24	9.00e-53	200.00
IUUC-Bol-016145	Brassica oleracea	68.36	3.00e-176	610.00
IUUC-Bra-017951	Brassica rapa	67.19	2.00e-166	577.00
IUUC-Cne-026851	Cryptococcus neoformans	57.45	6.00e-12	67.00
IUUC-Gma-042695	Glycine max	43.23	2.00e-93	336.00
IUUC-Hvu-047140	Hordeum vulgare	30.24	4.00e-51	195.00
IUUC-Lpe-051590	Leersia perrieri	32.08	6.00e-53	202.00
IUUC-Loc-052699	Lepisosteus oculatus	40.32	6.00e-13	70.10
IUUC-Mtr-058493	Medicago truncatula	41.15	2.00e-86	312.00
IUUC-Mac-065361	Musa acuminata	31.76	2.00e-54	206.00
IUUC-Ont-071565	Oreochromis niloticus	40.32	7.00e-13	69.70
IUUC-Oba-075978	Oryza barthii	33.09	9.00e-57	214.00
IUUC-Obr-076162	Oryza brachyantha	32.87	3.00e-56	211.00
IUUC-Ogl-077688	Oryza glaberrima	28.68	1.00e-37	150.00
IUUC-Ogu-078286	Oryza glumaepatula	33.33	2.00e-57	216.00
IUUC-Oin-079536	Oryza indica	33.33	2.00e-57	216.00
IUUC-Olo-081087	Oryza longistaminata	33.33	9.00e-58	218.00
IUUC-Ome-081892	Oryza meridionalis	33.41	2.00e-57	216.00
IUUC-Oni-082124	Oryza nivara	33.33	2.00e-57	216.00
IUUC-Opu-084017	Oryza punctata	33.49	4.00e-58	219.00
IUUC-Oru-084542	Oryza rufipogon	33.33	3.00e-57	215.00
IUUC-Osa-086025	Oryza sativa	33.33	3.00e-57	215.00
IUUC-Pop-099257	Populus trichocarpa	39.85	1.00e-90	326.00
IUUC-Ppe-101709	Prunus persica	47.65	7.00e-106	377.00
IUUC-Sit-110064	Setaria italica	33.25	2.00e-56	213.00
IUUC-Sly-111296	Solanum lycopersicum	42.93	3.00e-95	341.00
IUUC-Stu-112523	Solanum tuberosum	47.27	3.00e-69	254.00
IUUC-Tca-120988	Theobroma cacao	46.34	1.00e-110	392.00
IUUC-Tae-125487	Triticum aestivum	30.67	2.00e-55	210.00
IUUC-Tur-126151	Triticum urartu	31.25	7.00e-52	197.00
IUUC-Vvi-130984	Vitis vinifera	43.13	5.00e-98	351.00
IUUC-Xtr-131812	Xenopus tropicalis	40.32	7.00e-12	66.20
IUUC-Zma-135228	Zea mays	32.68	1.00e-53	203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence