iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095871

Ensembl Protein ID

PP1S535_6V6.1

UniProt Accession

A9U4S8; A9U4S8_PHYPA

Genbank Protein ID

EDQ49326.1

Protein Name

Transcriptional repressor EED/ESC/FIE

Genbank Nucleotide ID

DS545404

Gene Name

PGE1501; PHYPADRAFT_61985

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S535_6V6	PP1S535_6V6.1	PP1S535_6V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-22	78.4	178	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gH ++v +++f  sd   ++s++ D+tik+W+lr
   Q: 178  GHRNEVLSVDFhgSDiLQMASCGMDNTIKIWSLR 211
           8***********9999999*************97 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MALKPAGGFG TDPVMGDLVP DKKRSREYKV TNRLQEGKRP LYAICFNLID SRFYHVFASA 60
GGNRVTVYQC LPEGGAVAVL LAFVDEDKEE EFYTVSWAVG RDGNPLLACS GSNGVLRIID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCATCTCTG CGGATTACAG TTTCTTGGCA TGGCGTGATT TTTGCGCGGG TCAATCAACT 60
CACAGGAGGT CTTGTGTTTT AGCATTTGCA AAACGAGGTG TCGTGGTTGC GAACCCAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0016571--P:histone methylation
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold

KEGG

ppp:PHYPADRAFT_61985

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	68.63	2.00e-158	551.00
IUUC-Aml-001510	Ailuropoda melanoleuca	38.69	3.00e-68	252.00
IUUC-Atr-002496	Amborella trichopoda	70.67	4.00e-148	516.00
IUUC-Apl-003768	Anas platyrhynchos	39.45	9.00e-73	266.00
IUUC-Aca-004382	Anolis carolinensis	39.45	4.00e-73	268.00
IUUC-Aly-005980	Arabidopsis lyrata	64.40	6.00e-149	519.00
IUUC-Ath-006579	Arabidopsis thaliana	65.22	1.00e-150	525.00
IUUC-Ame-010987	Astyanax mexicanus	40.27	9.00e-73	266.00
IUUC-Bta-013432	Bos taurus	39.18	4.00e-72	264.00
IUUC-Bci-013970	Botrytis cinerea	30.80	3.00e-23	102.00
IUUC-Bdi-014553	Brachypodium distachyon	71.31	6.00e-163	566.00
IUUC-Bol-016522	Brassica oleracea	63.96	8.00e-148	515.00
IUUC-Bra-017137	Brassica rapa	63.96	2.00e-148	517.00
IUUC-Cel-018494	Caenorhabditis elegans	22.80	1.00e-14	73.90
IUUC-Cja-019066	Callithrix jacchus	39.18	6.00e-72	264.00
IUUC-Cfa-021261	Canis familiaris	39.18	4.00e-72	264.00
IUUC-Cpo-022375	Cavia porcellus	40.00	2.00e-62	232.00
IUUC-Csa-024005	Chlorocebus sabaeus	39.18	4.00e-72	264.00
IUUC-Cho-024881	Choloepus hoffmanni	40.16	8.00e-47	180.00
IUUC-Cin-025697	Ciona intestinalis	41.44	3.00e-74	271.00
IUUC-Csv-026221	Ciona savignyi	41.73	2.00e-75	275.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	27.11	5.00e-17	81.60
IUUC-Cne-026877	Cryptococcus neoformans	30.24	8.00e-19	88.20
IUUC-Cme-027353	Cyanidioschyzon merolae	41.96	1.00e-27	117.00
IUUC-Dre-028346	Danio rerio	40.55	6.00e-73	267.00
IUUC-Dno-029319	Dasypus novemcinctus	39.45	4.00e-72	264.00
IUUC-Dor-030746	Dipodomys ordii	29.89	5.00e-44	171.00
IUUC-Dse-031324	Dothistroma septosporum	26.74	3.00e-19	89.00
IUUC-Dme-032029	Drosophila melanogaster	38.92	1.00e-69	256.00
IUUC-Ete-032880	Echinops telfairi	35.92	7.00e-36	144.00
IUUC-Eca-034272	Equus caballus	39.18	5.00e-72	263.00
IUUC-Eeu-035303	Erinaceus europaeus	35.99	2.00e-65	242.00
IUUC-Fca-036008	Felis catus	39.18	4.00e-72	264.00
IUUC-Fal-037577	Ficedula albicollis	39.45	9.00e-73	266.00
IUUC-Fso-038294	Fusarium solani	34.93	3.00e-22	99.00
IUUC-Gmo-039008	Gadus morhua	40.23	1.00e-66	246.00
IUUC-Ggr-039894	Gaeumannomyces graminis	30.17	6.00e-19	88.20
IUUC-Gga-040859	Gallus gallus	39.45	8.00e-73	266.00
IUUC-Gac-041667	Gasterosteus aculeatus	40.35	8.00e-66	243.00
IUUC-Gma-042718	Glycine max	75.88	6.00e-170	589.00
IUUC-Ggo-045624	Gorilla gorilla	36.67	6.00e-68	250.00
IUUC-Hsa-046505	Homo sapiens	39.18	4.00e-72	264.00
IUUC-Hvu-047228	Hordeum vulgare	75.43	9.00e-81	291.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	39.18	4.00e-72	264.00
IUUC-Lch-050492	Latimeria chalumnae	39.45	2.00e-73	268.00
IUUC-Lpe-050807	Leersia perrieri	63.00	6.00e-148	516.00
IUUC-Loc-052361	Lepisosteus oculatus	39.78	6.00e-74	270.00
IUUC-Lma-053058	Leptosphaeria maculans	23.44	1.00e-15	77.40
IUUC-Laf-053941	Loxodonta africana	38.67	1.00e-71	263.00
IUUC-Mcc-055518	Macaca mulatta	36.67	6.00e-68	250.00
IUUC-Mor-056944	Magnaporthe oryzae	27.27	3.00e-18	86.30
IUUC-Mtr-058716	Medicago truncatula	71.23	6.00e-157	546.00
IUUC-Mga-059469	Meleagris gallopavo	39.45	6.00e-73	267.00
IUUC-Mmr-061026	Microcebus murinus	36.67	6.00e-68	250.00
IUUC-Mdo-062346	Monodelphis domestica	39.73	2.00e-73	268.00
IUUC-Mmu-063785	Mus musculus	39.18	4.00e-72	264.00
IUUC-Mac-064681	Musa acuminata	72.90	1.00e-166	577.00
IUUC-Mpu-066862	Mustela putorius furo	39.18	4.00e-72	264.00
IUUC-Mlu-067103	Myotis lucifugus	38.03	5.00e-68	250.00
IUUC-Ncr-068782	Neurospora crassa	33.14	4.00e-19	89.40
IUUC-Nle-069472	Nomascus leucogenys	39.18	4.00e-72	264.00
IUUC-Opr-070376	Ochotona princeps	39.04	1.00e-44	173.00
IUUC-Ont-071513	Oreochromis niloticus	40.05	8.00e-74	270.00
IUUC-Oan-073202	Ornithorhynchus anatinus	39.45	4.00e-73	267.00
IUUC-Ocu-074012	Oryctolagus cuniculus	39.18	4.00e-72	264.00
IUUC-Oba-075030	Oryza barthii	70.78	9.00e-163	565.00
IUUC-Obr-076895	Oryza brachyantha	69.39	6.00e-160	556.00
IUUC-Ogl-077522	Oryza glaberrima	73.26	2.00e-157	547.00
IUUC-Ogu-078120	Oryza glumaepatula	65.15	5.00e-146	510.00
IUUC-Oin-079886	Oryza indica	71.31	8.00e-164	568.00
IUUC-Olo-080238	Oryza longistaminata	73.01	4.00e-160	556.00
IUUC-Ome-081823	Oryza meridionalis	65.15	1.00e-146	512.00
IUUC-Oni-082388	Oryza nivara	60.86	2.00e-133	468.00
IUUC-Opu-083537	Oryza punctata	69.92	2.00e-161	560.00
IUUC-Oru-084863	Oryza rufipogon	60.32	5.00e-136	476.00
IUUC-Osa-085622	Oryza sativa	70.78	4.00e-162	563.00
IUUC-Ola-087426	Oryzias latipes	38.25	5.00e-65	243.00
IUUC-Olu-087788	Ostreococcus lucimarinus	32.73	6.00e-54	203.00
IUUC-Oga-088228	Otolemur garnettii	39.18	4.00e-72	264.00
IUUC-Oar-090139	Ovis aries	39.18	6.00e-72	263.00
IUUC-Pan-092874	Papio anubis	40.38	1.00e-54	205.00
IUUC-Psi-093927	Pelodiscus sinensis	39.67	3.00e-73	268.00
IUUC-Pma-094740	Petromyzon marinus	40.08	1.00e-41	162.00
IUUC-Pno-095072	Phaeosphaeria nodorum	22.67	4.00e-10	58.50
IUUC-Pfo-097208	Poecilia formosa	39.78	2.00e-73	268.00
IUUC-Pab-097658	Pongo abelii	39.18	4.00e-72	264.00
IUUC-Pop-098930	Populus trichocarpa	70.65	1.00e-162	565.00
IUUC-Ppe-101807	Prunus persica	73.33	1.00e-168	584.00
IUUC-Pva-103191	Pteropus vampyrus	32.56	2.00e-53	202.00
IUUC-Pgr-103619	Puccinia graminis	29.30	4.00e-19	88.60
IUUC-Pte-104406	Pyrenophora teres	24.92	1.00e-22	100.00
IUUC-Pyt-104821	Pyrenophora triticirepentis	22.75	2.00e-18	86.30
IUUC-Rno-105854	Rattus norvegicus	39.18	4.00e-72	264.00
IUUC-Sha-107426	Sarcophilus harrisii	39.73	3.00e-73	268.00
IUUC-Smo-109638	Selaginella moellendorffii	73.86	6.00e-162	562.00
IUUC-Sit-110481	Setaria italica	69.79	3.00e-158	550.00
IUUC-Sly-111464	Solanum lycopersicum	70.65	1.00e-161	561.00
IUUC-Stu-112910	Solanum tuberosum	70.38	3.00e-161	560.00
IUUC-Sar-113754	Sorex araneus	37.25	6.00e-64	236.00
IUUC-Sbi-114023	Sorghum bicolor	69.52	1.00e-157	548.00
IUUC-Ssc-115386	Sus scrofa	39.18	4.00e-72	264.00
IUUC-Tgu-117123	Taeniopygia guttata	39.45	8.00e-73	266.00
IUUC-Tru-117720	Takifugu rubripes	39.05	2.00e-70	259.00
IUUC-Tsy-119584	Tarsius syrichta	36.67	6.00e-68	250.00
IUUC-Tni-119695	Tetraodon nigroviridis	40.60	5.00e-74	270.00
IUUC-Tca-121787	Theobroma cacao	72.27	5.00e-167	579.00
IUUC-Tvi-122409	Trichoderma virens	25.76	2.00e-17	82.80
IUUC-Tae-124454	Triticum aestivum	68.63	2.00e-158	551.00
IUUC-Tme-126906	Tuber melanosporum	30.94	6.00e-33	134.00
IUUC-Tbe-127557	Tupaia belangeri	37.71	6.00e-66	244.00
IUUC-Vda-129774	Verticillium dahliae	30.43	3.00e-19	89.00
IUUC-Vpa-130256	Vicugna pacos	32.12	1.00e-53	202.00
IUUC-Vvi-131201	Vitis vinifera	72.28	2.00e-165	574.00
IUUC-Xtr-132206	Xenopus tropicalis	39.73	3.00e-74	271.00
IUUC-Xma-134102	Xiphophorus maculatus	40.05	1.00e-73	269.00
IUUC-Zma-135593	Zea mays	70.05	4.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence